Re: [Bioc-devel] Error unable to find image

2020-01-22 Thread Shepherd, Lori
ach Shao ; bioc-devel@r-project.org Subject: Re: [Bioc-devel] Error unable to find image Will do, thanks Lori! Best, Leo On Tue, Jan 21, 2020 at 1:24 PM Shepherd, Lori mailto:lori.sheph...@roswellpark.org>> wrote: Wait for knitr to be available on CRAN. The builders do not respect rem

Re: [Bioc-devel] Error unable to find image

2020-01-21 Thread Leonardo Collado Torres
:* Tuesday, January 21, 2020 1:19 PM > *To:* Martin Morgan > *Cc:* Zach Shao ; bioc-devel@r-project.org < > bioc-devel@r-project.org> > *Subject:* Re: [Bioc-devel] Error unable to find image > > Hi, > > Thanks for the links! > > Should we wait for the knitr fi

Re: [Bioc-devel] Error unable to find image

2020-01-21 Thread Shepherd, Lori
rk 14263 From: Bioc-devel on behalf of Leonardo Collado Torres Sent: Tuesday, January 21, 2020 1:19 PM To: Martin Morgan Cc: Zach Shao ; bioc-devel@r-project.org Subject: Re: [Bioc-devel] Error unable to find image Hi, Thanks for the links! Should we wait for the knitr fix to be a

Re: [Bioc-devel] Error unable to find image

2020-01-21 Thread Leonardo Collado Torres
Hi, Thanks for the links! Should we wait for the knitr fix to be available through CRAN or edit our DESCRIPTION files to force the Bioc machines to install `knitr` from GitHub? Best, Leo On Mon, Jan 20, 2020 at 12:11 PM Martin Morgan wrote: > This seems to be a problem with a recent change

Re: [Bioc-devel] Error unable to find image

2020-01-20 Thread Martin Morgan
This seems to be a problem with a recent change to knitr https://github.com/Bioconductor/BiocStyle/issues/71 https://github.com/yihui/knitr/issues/1797 Please follow these issues; it looks like it is fixed in the github repository, but needs to be made available in CRAN for this to be fixed

[Bioc-devel] Error unable to find image

2020-01-20 Thread Zach Shao
Hello, Not sure what to make of this error with building the vingette by bioconductor. The figures are all there. Did something change with knitr? Thank you. Zach ##