Re: [Bioc-devel] Recent change in MultiAssayExperiment for inferred MAE-level colData

2021-01-04 Thread Marcel Ramos
Hi all, Apologies for the delay. I hope you had a nice break. This should be fixed in 1.17.4. Bonne année! Best, Marcel On 1/2/21 1:18 PM, Levi Waldron wrote: Hi Dario and Andrea, I don't think you'll have to do anything - it was meant to be a feature that shouldn't have affected your use

Re: [Bioc-devel] Recent change in MultiAssayExperiment for inferred MAE-level colData

2021-01-02 Thread Levi Waldron
Hi Dario and Andrea, I don't think you'll have to do anything - it was meant to be a feature that shouldn't have affected your use cases of not specifying the sampleMap. I've opened an issue at https://github.com/waldronlab/MultiAssayExperiment/issues/291. -- Levi Waldron Associate Professor

Re: [Bioc-devel] Recent change in MultiAssayExperiment for inferred MAE-level colData

2020-12-28 Thread Dario Strbenac
This also happens to ClassifyR. ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel

[Bioc-devel] Recent change in MultiAssayExperiment for inferred MAE-level colData

2020-12-28 Thread Andrea Rau
Hello Marcel, Thanks to you for your very useful MultiAssayExperiment package, it has provided a very useful framework that I have made use of in my multi-omic package padma. I've noticed that padma has started breaking in devel due to a recent change in MultiAssayExperiment (v1.17.3, which is