Re: [Bioc-devel] singleCellTK

2024-04-23 Thread Joshua Campbell via Bioc-devel
the package has been failing for an > extended period of time (since early December). > > > > > From: Bioc-devel on behalf of Joshua > Campbell via Bioc-devel > Sent: Monday, April 22, 2024 8:34 AM > To: bioc-devel@r-project.org > Subject: [Bioc-

Re: [Bioc-devel] singleCellTK

2024-04-23 Thread Kern, Lori via Bioc-devel
rk 14263 From: Bioc-devel on behalf of Kern, Lori via Bioc-devel Sent: Monday, April 22, 2024 9:08 AM To: bioc-devel@r-project.org ; Joshua Campbell Subject: Re: [Bioc-devel] singleCellTK Please try to push the change to fix the gvsa issue. We generally will only un-deprecate when we see

Re: [Bioc-devel] singleCellTK

2024-04-22 Thread Kern, Lori via Bioc-devel
). From: Bioc-devel on behalf of Joshua Campbell via Bioc-devel Sent: Monday, April 22, 2024 8:34 AM To: bioc-devel@r-project.org Subject: [Bioc-devel] singleCellTK Hello, The package singleCellTK <https://secure-web.cisco.com/1wq8O1kSgJOUZsgHipzl-RZLqngGu3sumYdSdeICLNbaEfv7UgjYX

[Bioc-devel] singleCellTK

2024-04-22 Thread Joshua Campbell via Bioc-devel
Hello, The package singleCellTK is currently slated for depreciation in Bioc devel (3.19). We have been actively fixing the dependency issues, mainly the underlying changes in Seurat update. We are fixing one last issue to be c