Re: [Bioc-devel] Version numbers incremented?

2016-05-17 Thread Leonardo Collado Torres
Hi, Does your package use knitr for creating the vignettes? If so, it must be because of https://github.com/lcolladotor/derfinder/commit/c70ede92fb14e83a0fe0032353f7f897ff55b5d5 (the equivalent commit for your package). Best, Leonardo On Tue, May 17, 2016 at 4:18 AM, Ulrich Bodenhofer wrote: >

Re: [Bioc-devel] Version numbers incremented?

2016-05-17 Thread Ulrich Bodenhofer
Thanks, Leonardo! Yes, all my four packages use knitr, while the other eight packages I mentioned use Sweave. So my question is answered and the issue is closed, thanks again! I just wanted to know what happened, since I could not find an explaination why the version numbers have been bumped.

Re: [Bioc-devel] Version numbers incremented?

2016-05-17 Thread Kasper Daniel Hansen
Ulrich, "svn log" does not help you here? On Tue, May 17, 2016 at 9:12 AM, Ulrich Bodenhofer wrote: > Thanks, Leonardo! Yes, all my four packages use knitr, while the other > eight packages I mentioned use Sweave. So my question is answered and the > issue is closed, thanks again! I just wanted

Re: [Bioc-devel] Version numbers incremented?

2016-05-17 Thread Ulrich Bodenhofer
riginal Message - From: "Kasper Daniel Hansen" To: "Ulrich Bodenhofer" Cc: "bioc-devel" , "msa" , keb...@bioinf.jku.at Sent: Tuesday, May 17, 2016 7:15:35 AM Subject: Re: [Bioc-devel] Version numbers incremented? Ulrich, "svn log" does not h

Re: [Bioc-devel] Version numbers incremented?

2016-05-17 Thread Dan Tenenbaum
et, so these .R files are now created. See https://github.com/yihui/knitr/issues/1212 for more. Dan - Original Message - > From: "Kasper Daniel Hansen" > To: "Ulrich Bodenhofer" > Cc: "bioc-devel" , "msa" , > keb...@bioinf.jku.at