Dear CCP4 users,
I refined my final model (protein-RNA complex) using TLS refinement in
Refmac but when i am validating the coordinates I am having an issue
with Bond Distances and Bond Angles of some of the bases of RNA, these
values for some of the bases are higher ( >6 times) then the standard
Yes, Virginia, there is a Santa Coot:
http://tinyurl.com/24mchk
This one will work on intel, both 10.4 and 10.5. If there are any problems let
me know.
PPC version to follow in the next few days. It is designed to be stand-alone,
and to inflexibly
install into /usr/local/coot
I used a gtk+2
Hi Mark
I used to do followings: Run 0 cycle of refmac with aniso refinement
and then take aniso cards for atoms I want to refine aniso and put in
the relevant position of the
original pdb file. After that I would do mixed refinement.
I should warn that I have not tested this option for a
Hi all,
I hope everyone is having a nice holiday break. I want to refine the
B's anisotropically of only the selenium atoms. Does BREF MIXED
option work in REFMAC? Do I need to pre-calculate the ANISOU
parameters or can I just enter a blank ANISOU card?
Thanks,
Mark
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Dear CCP4bbers
The CCP4 helpdesk at [EMAIL PROTECTED] will now effectively be unstaffed
until 2nd January 2008, so our apologies in advance if you send
questions to us regarding usage or bugs in the suite before then - it
may take a little longer before you hear back.
(There will however be some
