Alfredo,
The other alternative explanation to your two species protein sample is in the
presence or absence of initiator
methionine. About 70-80 of all prokaryotic proteins under post-translational
removal of initiator formylmethioine
(178 Da) in two step process. First the formyl (29 Da)
PROPOSALS FOR BEAMTIME ON THE ESRF Bio-SAXS BEAMLINE ID14-3
User operation on the new Bio-SAXS beamline at ID14-3 at the ESRF (
http://www.esrf.fr/UsersAndScience/Experiments/MX/About_our_beamlines/copy_of_ID14-3
) began in November 2008 with mounting of samples currently performed
manually.
We have found a home for our system.
Thanks to all who replied.
At 2:06 AM + 1/20/09, Pamela Focia wrote:
We have an Raxis II system we took down a few months ago, plus an
almost full, duplicate
set of its major parts that we salvaged from a neighboring
University last year. If you can
I note that in CCP4 6.1.0, arp_waters has been deprecated. Is there a
program in the suite which fills the role formerly filled by arp_waters,
of automatically adding waters?
Cheers,
-
===
You can't possibly be a scientist if
Hi David,
for example:
phenix.refine does it automatically as part of usual refinement; for
illustration, see the picture here:
http://phenix-online.org/documentation/refinement.htm
Cheers,
Pavel.
On 1/20/2009 10:13 AM, David J. Schuller wrote:
I note that in CCP4 6.1.0, arp_waters has
Is anybody else having problems to download ccp4 from automated page?
I can only get a 70Kb file, which I don't believe contains all the package!
Thanks in advance
--
[ ]s
--alessandro
I will second noting the loss of arp_waters in
CCP4 6.1. I know there is a "find waters" option in Coot 0.5.2 under
"Calculate...Other modeling tools", and perhaps this is adequate, but
it doesn't seem to have as many options for fine-tuning as arp_waters
did. Coot allows for finding waters
arp_waters is very useful for a variety of purposes.
I would like to see it supported in future releases.
Best, BR
From: CCP4 bulletin board [mailto:ccp...@jiscmail.ac.uk] On Behalf Of Roger
Rowlett
Sent: Tuesday, January 20, 2009 11:40 AM
To: CCP4BB@JISCMAIL.AC.UK
Subject: Re: [ccp4bb]
Dear All
Packages downloaded since 10 am GMT will be missing the core suite,
and other elements.
This problem has now been fixed, and everything should be working
properly.
Sorry for any inconvenience
Charles Ballard
CCP4
Roger Rowlett wrote:
I will second noting the loss of arp_waters in CCP4 6.1. I know there
is a find waters option in Coot 0.5.2 under Calculate...Other
modeling tools, and perhaps this is adequate, but it doesn't seem to
have as many options for fine-tuning as arp_waters did. Coot allows
for
And Linux partitions can be accessed from windows:
http://www.howtoforge.com/access-linux-partitions-from-windows
On Mon, 2009-01-19 at 12:49 +, Roger Dodd wrote:
Dear all,
Just to add, linux now has perfectly good read-write stable drivers for
NTFS (the native WinXP filesystem). This
Part of the reasoning was that arp_waters corresponded to a very old version
of arp/warp It was felt that up-to-date arp/warp and/or findwaters covered
the functionality.
Of course, every implementation does things in a slightly different way, and
each has their fans. Which means it is hard to
Since this was of discussion on this board a week or so ago, I figure
it has relevancy.
http://store.nvidia.com/DRHM/servlet/ControllerServlet?Action=DisplayProductDetailsPageSiteID=nvidiaLocale=en_USEnv=BASEproductID=111286400utm_source=newsletterutm_medium=emailutm_campaign=store_Jan09#
Might I add yet another call for the reinstatement of arp_waters - a
very useful program indeed.
Steve
From: CCP4 bulletin board [mailto:ccp...@jiscmail.ac.uk] On Behalf Of
Bernhard Rupp
Sent: Tuesday, January 20, 2009 2:50 PM
To: CCP4BB@JISCMAIL.AC.UK
Subject:
On 17:05 Tue 20 Jan , Paul Emsley wrote:
Roger Rowlett wrote:
I will second noting the loss of arp_waters in CCP4 6.1. I know there
is a find waters option in Coot 0.5.2 under Calculate...Other
modeling tools, and perhaps this is adequate, but it doesn't seem to
have as many options
*
*
*
As a newbie, am I stating the obvious or missing something:
What about installing ARPwARP 7.0.1 in CCP4 (really easy!)?
You?ll then have in CCP4i /Model Building, the ARP/wARP Solvent Module
Victor Alves
Quoting David J. Schuller dj...@cornell.edu:
Donnie Berkholz wrote:
One of the major reasons our lab started using Coot instead of O is that
you didn't have to memorize or look up a million obscure functions to do
everything. It was in the Coot GUI.
When we're training new people, this helps immensely for the 99% of them
who have never
I remember that the Geforce series are capable of doing stereo only under
the fullscreen OpenGL mode - which is only used in 3D games. This capability
is provided by the Nvidia video driver. Under this mode, the card takes the
3D model that the game software sends to it, and generates a stereo
*POSTDOCTORAL POSITION IN STRUCTURAL BIOLOGY *
INSTITUT DE PHARMACOLOGIE ET DE BIOLOGIE STRUCTURALE
CNRS, UNIVERSITE DE TOULOUSE
FRANCE
A postdoctoral position is immediately available in the group of Lionel
Mourey at the Institut de Pharmacologie et de Biologie Structurale
(IPBS) to
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