Re: [ccp4bb] research paper

2011-07-29 Thread Robbie Joosten
Jung-Hoon, This is a so-called WaReZ request, which could get you banned a lot of webfora. Of course, we are all guilty of it at some occasions. The best way to get an article is to ask the authors, they are allowed give away free copies (depending on the journal I guess). Hooray, for authors w

[ccp4bb] Serious error in Pointless versions 1.5.x, sincere apologies

2011-07-29 Thread Phil Evans
Summary There is a serious error in all the 1.5.x versions of Pointless for certain cases, fixed now in version 1.6.1 available now from our ftp site. The wrong 1.5.x versions have been distributed by CCP4 in releases 6.1.24 and the recent 6.2.0, but earlier CCP4 releases (6.1.13 and before

Re: [ccp4bb] pdb_extact and refmac5.6

2011-07-29 Thread Jasmine Young
Hello, We are currently in the final stages of updating the standalone version of pdb_extract. In the meantime, we encourage users to try the web server version of the program at http://pdb-extract.rcsb.org/ The PDB_extract will: # provide you with an author information form, which can be sa

[ccp4bb] Post-doc positions at Colorado State

2011-07-29 Thread Olve Peersen
This is a reposting of Post-doc ad with the full-consideration application deadline next week. Note that there are multiple independent post-docs with projects involving mostly crystallography or mostly biochemistry. === Post-doctoral fellow positions in ubiquitin signaling and RNA virus

Re: [ccp4bb] Fab:antigen complex crystallization!!!

2011-07-29 Thread xaravich ivan
Thanks everyone, I got my crystals with PEG 8000 at first and after micro-seeding aith PEG 3350.Now I would work with all your suggestions and references with new vigor. ivan On Thu, Jul 28, 2011 at 9:43 AM, Patrick Shaw Stewart wrote: > Ed (and Ivan) > > Peter Sun and colleagues published two

[ccp4bb] Newbie Installation Question

2011-07-29 Thread Yuri
Dear all, I have just downloaded and installed the ccp4-6.2.0. It says all I should do next is source the /setup-scripts/csh/ccp4.setup file... I have done that, but I cannot launch the program... Any help is welcome...(it is probably something really stupid on my part...) Best,

Re: [ccp4bb] Newbie Installation Question

2011-07-29 Thread Santarsiero, Bernard D.
I've had problems too. Some of the files are non-readable, so you need to do a sudo chmod -R a+r * to make them readable. Also it looks like the libraries changed a bit (at least for ADP). Bernie On Fri, July 29, 2011 2:08 pm, Yuri wrote: > Dear all, > I have just downloaded and installed the c

Re: [ccp4bb] Newbie Installation Question

2011-07-29 Thread Ed Pozharski
On Fri, 2011-07-29 at 20:08 +0100, Yuri wrote: > Dear all, > I have just downloaded and installed the ccp4-6.2.0. > It says all I should do next is source the /setup-scripts/csh/ccp4.setup > file... I have done that, but I cannot launch the program... > Any help is welcome...(it is probably somet

Re: [ccp4bb] Newbie Installation Question

2011-07-29 Thread Yuri
I tried that too ... no success On Fri, 29 Jul 2011 15:28:58 -0400, Ed Pozharski wrote: On Fri, 2011-07-29 at 20:08 +0100, Yuri wrote: Dear all, I have just downloaded and installed the ccp4-6.2.0. It says all I should do next is source the /setup-scripts/csh/ccp4.setup file... I have done t

Re: [ccp4bb] Newbie Installation Question

2011-07-29 Thread Wei-Chun Kao
Hi, where did you install CCP4? from the path of your setup-script it seems like to be in the root (/) ? It looks like the problem I posted some days before but probably being buried in the middle of the other thread. Since it's more related to this topic so I paste it again, hoping that it can s

Re: [ccp4bb] Newbie Installation Question

2011-07-29 Thread Yuri
yes, I noticed the default was TCLTK /usr/local/bin. I think it should be /usr/local/username.../tcltkplusplus/bin Even after editing this it doesnt launch. the command not found message is gone though On Fri, 29 Jul 2011 22:02:22 +0200, Wei-Chun Kao wrote: > Hi, > where did you install

Re: [ccp4bb] Newbie Installation Question

2011-07-29 Thread Yuri
I downloaded the package for RHEL5. My default shell is sh. But I can change environments. I have progrmas that I must run in tcsh. I tried sourcing sh and csh setups. With the csh setup, after I changed the PATH in the ccp4.setup file (originally set to usr/local/bin), I type ccp4 and I get

[ccp4bb] detergents

2011-07-29 Thread anita p
Hi all, I have been trying to purify cytosolic fraction of membrane protein whose domain boundries are unknown. hence I have made a series of deletion constructs. The expression and purification is not a problem. I get good yields of the proteins. But on a gelfiltration column, they run in the void