the angle of rotation is kappa = 160.045deg in this case
On 24 Aug 2012, at 04:33, Appu kumar wrote:
Sir one more help plz i have the following matrix which one shall i use to
calculate the angle.
INFO:: coordinates transformed by orthonal matrix:
| -0.6927, -0.7191,0.0564|
|
Hi
It should do. Jim will know for sure.
On 23 Aug 2012, at 23:08, jlliu liu wrote:
My real questions is:
Does d*trek recognize the img file format collected at ALS or APS and process
the data?
Thanks!
On Thu, Aug 23, 2012 at 6:00 PM, jlliu liu jlliu20022...@gmail.com wrote:
On 23/08/12 20:08, Nikolina Sekulic wrote:
Dear Appu,
I had similar issue once. You can use Coot to overlay two structures
and get the rotation matrix
a1 a2 a3
b1 b2 b3
c1 c2 c3
from here you can calculate cosine of an angle using formula
(a1+b2+c3-1)/2
You can if you like, but Coot does
I believe $CCP4/bin/superpose does the same
Eugene
On 24 Aug 2012, at 11:44, Paul Emsley wrote:
On 23/08/12 20:08, Nikolina Sekulic wrote:
Dear Appu,
I had similar issue once. You can use Coot to overlay two structures and get
the rotation matrix
a1 a2 a3
b1 b2 b3
c1 c2 c3
d*TREK can process single crystal diffraction images from all the common
detectors including not only Rigaku detectors, but many different detectors
found at synchrotron beamlines around the world such as the APS, ALS, NSLS,
CHESS, SLS, ESRF, Diamond, Soleil, PhotonFactory, SPring8, CAMD,
Dear all,
i want to do structural homology but i am still beginner , could some one help
me to do it.is there are specific programs to do that or should i do it
manually ?
thank you
Amr
I-tasser or Robetta , modeler and many more
Sent from my iPad
On Aug 24, 2012, at 22:23, amro selem
amro_selem2...@yahoo.commailto:amro_selem2...@yahoo.com wrote:
Dear all,
i want to do structural homology but i am still beginner , could some one help
me to do it.ishttp://it.is there are
Adding to the popular suggestions..
Check out the PSI Protein Model Portal (http://www.proteinmodelportal.org/),
which allows submission to several servers including I-Tasser and Modeller as
well as some informative tutorials on modeling workflow, etc.
Also check out some other standalone
Hi everyone,
I have been working on a protein for the past year. After a
number of trials at crystallizing the protein i have identified conditions for
getting spherulites/micro-crystaline material under micro batch method. I have
confirmed that the crystalline material is
Dear CCP4bb,
We would like to co-express proteins under Se-Met conditions for de-novo
phasing of a complex. One of the proteins expresses much better with a GST-tag
compared with a his-tag.
As its binding site is at its N-terminus, we are hoping to co-express it as a
C-terminal GST tag
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