[ccp4bb] PhD position in structure-function studies of redox stress signaling proteins

2013-12-20 Thread Inge Van Molle
On behalf of Prof Joris Messens: PhD position in structure-function studies of redox stress signaling proteinsPosition: A PhD Research position is immediately available for structure-function studies on peroxiredoxins of pathogentic Actinomycetes that control signaling during

[ccp4bb] CCP4MG Release 2.8.0

2013-12-20 Thread Stuart Mcnicholas
Dear All, The CCP4MG team would like to announce version 2.8.0 of the program (the Christmas 2013 release). The program may be downloaded from http://www.ccp4.ac.uk/MG/download/ Highlights of this release include: - Reworked picture wizards and default program parameters to give more

[ccp4bb] Post-doctoral Position at Karolinska Institutet, Stockholm

2013-12-20 Thread Jodie Guy
A post-doctoral position is immediately available in the Division of Molecular Structural Biology at Karolinska Institutet in Stockholm (http://phillips.mbb.ki.se), to work on the structure and function of multi-protein complexes involved in protein processing in the eukaryotic ER and early

[ccp4bb] rmsd

2013-12-20 Thread Faisal Tarique
Dear all Can anybody please tell me if there is any sever where i can find RMSD and no of C alpha of the two structures which were aligned manually in PYMOL.. really apologize for asking off topic question.. thanks in advance -- Regards Faisal School of Life Sciences JNU

Re: [ccp4bb] rmsd

2013-12-20 Thread Tim Gruene
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Dear Faisal, it is not a server, but you can use lsqman (G. Kleywegt) for this with the following three lines typed at the prompt: re m1 file1.pdb re m2 file2.pdb rmsd_calc m1 A1-999 m2 A1 You could also align the molecules in coot, it will print

Re: [ccp4bb] How to config CPU to run ccp4 with multi-processor

2013-12-20 Thread Tom Oldfield
Hi If any use: I have commonly used the C/C++ and Java threaded code to create parallel processes. Python threading is badly implemented and best avoided, use sub-processes instead as these are forked. 1) CPU intensive code with no dependency scales close to N where N cores available, for

[ccp4bb] Post-doctoral position at Heinrich Heine University, Duesseldorf

2013-12-20 Thread Daniel Schlieper
Post-doctoral position in structure-function studies on plant-selective herbicides Weed control by selective herbicides is an important instrument to secure global food supply. Recent structural and biochemical studies in our lab have identified new selective inhibitors of a protein essential