[ccp4bb] Industrial postdoc position at Biogen

2017-04-25 Thread Matthew Chu
Hi All, This is a job posting on behalf of a friend at Biogen, Cambridge, MA, US: We have a postdoctoral position open to study Wnt signaling and its role in neurodegeneration. A number of studies have shown the importance of the Wnt signaling pathway in the survival and maintenance of

[ccp4bb] Contouring 2Fo-Fc map, large blobs in Fo-Fc

2017-04-25 Thread Roger Shek
Hi everyone, We have a structure that phaser found a solution for in P1, even though there is a large off-origin Patterson peak indicating pseudo NCS. However, the 2mFo-Fc map needs to be contoured up to >3 sigma to be reasonable, going lower makes it look like what I normally see at <1 sigma. If

[ccp4bb] Fwd: Structural Bioinformatics Training Workshop & Hackathon 2017 - Application of Big Data Technology and 3D Visualization

2017-04-25 Thread Peter Rose
*Structural Bioinformatics Training Workshop & Hackathon 2017 - Application of Big Data Technology and 3D Visualization* San Diego Supercomputer Center/University of California, San Diego, June 26 - 28, 2017 *Application deadline: April 30, 2017.* https://www.etouches.com/mmtf2017 This 3-day

Re: [ccp4bb] Cryo-em model building with Balbes

2017-04-25 Thread Martyn Winn
Hi, MRC is a map format, and doesn't hold the reciprocal space structure factors that Balbes expects, and that are referred to in the error message. Yes, you will need to calculate structure factors, which are held in the MTZ format. Simplest way is to use Refmac, which deals with issues like

Re: [ccp4bb] Cryo-em model building with Balbes

2017-04-25 Thread cheng tat cheung
phenix.map_to_structure_factors can do the conversion, and then all the crystallographic tools for model building should be ready to use. Tat Sent from my iPhone > On 25 Apr 2017, at 10:36 AM, KL Ho > <05c3a58110fa-dmarc-requ...@jiscmail.ac.uk> wrote: > > Dear All, > > We are interested

[ccp4bb] Institut Pasteur Course on Integrative Structural Biology 2017 : deadline extension

2017-04-25 Thread Claudine Mayer
Institut Pasteur Course on Integrative Structural Biology Paris, July 17 – 22, 2017 ### Deadline extended to May 5 ### Dear all, We are pleased to announce the 2nd Pasteur Course on Integrative Structural Biology. Problems in structural biology today can very often not be solved by one

[ccp4bb] DIALS 1.5.1 released

2017-04-25 Thread Graeme Winter
Dear All, DIALS 1.5.1 for synchrotron data has been released - full release notes at https://github.com/dials/dials/releases/tag/v1.5.0 The software may be downloaded from http://dials.github.io/installation.html http://dials.diamond.ac.uk/installation.html