We are seeking a highly motivated postdoctoral fellow to investigate novel
regulation mechanisms of ubiquitinating enzymes. Our lab at the Hebrew
University of Jerusalem combines cutting-edge structural biology,
biochemistry, cell biology and molecular biology techniques to study the
molecular
Hi Johannes,
Did you read the PymoWIKI entry on the align command?
https://pymolwiki.org/index.php/Align#RMSD
I think this should give you what you want within PyMOL.
Btw, there is a nice dedicated PyMOL mailing list
https://pymolwiki.org/index.php/PyMOL_mailing_list
It is rather low traffic,
May be you should try pdbefold server. It provides rmsd between equivalent
CA atoms of superimposed structures.
All the best.
Vipul Panchal,
Ph.D. student
CSIR-IGIB
(M)- 091 7678617949
On 27-Aug-2017 4:50 PM, "Johannes Sommerkamp" <
155b9e78396e-dmarc-requ...@jiscmail.ac.uk> wrote:
> Hello
Hello everybody,
I have superposed two structures based on the central beta-sheet CA
atoms with the "super" command in Pymol.
Now, I want to calculate the RMSD between ALL atoms or ALL CA atoms
without moving the structures again. The rms_cur command in Pymol would
do that, but only works if
