Re: [ccp4bb] 3D stereo and pymol

2017-12-11 Thread Jim Fairman
Reporting in a setup that we just made: Quadro P4000 + 3 pin stereo bracket + 3d vision 2 kit + ASUS VG248QE. Running System76's PoPOS Ubuntu 17.10 distro - you'll have to install a desktop environment that supports non-compositing (ie: XFCE). Works beautifully. ---

[ccp4bb] PyMol question

2017-12-11 Thread Cygler, Miroslaw
Hi, When I loaded the ed map into PyMol v1.8.4.1 and used iso mesh around part of the protein all is well until I use the RAY command. In the ray traced image I see the unit cell box that does not show on the image in the normal view. How can I remove the box from the ray traced image? Thanks fo

[ccp4bb] Positions available in an EU training network

2017-12-11 Thread Goldman, Adrian
15 positions for PhD students in various aspects of structural and adhesion biology for VIral and BacteRial Adhesins (ViBrANT) are available. This is an EU ITN (innovative Training Network), with positions in both academia and industry, and spanning all the way from Portugal to Finland, The c

[ccp4bb] postdoc position available

2017-12-11 Thread Zheng, Hongjin
Dear Colleagues, We are currently seeking a postdoctoral fellow in the laboratory of Dr. Hongjin Zheng at the University of Colorado, Anschutz Medical Campus, Denver, CO, USA. The successful candidate will join an energetic group investigating the structural and functional mechanisms of various

[ccp4bb] AW: Re: [ccp4bb] Van der waals force

2017-12-11 Thread Herman . Schreuder
Hi Jiri, A low-tech solution that will certainly work, is just to manually show the relevant distances. In coot under measure there is an option to show distances, just by clicking on the two atoms involved. Good luck! Herman Von: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] Im Auftrag

[ccp4bb] Call for access to Synchrotron Beamline Facilities, 2017 - EMBL Hamburg, Germany

2017-12-11 Thread Sarah Marshall-Bensch
*Call for access to Synchrotron Beamline Facilities, 2018 - EMBL Hamburg, Germany *We announce a call for synchrotron beam time applications in biological small-angle X-ray scattering (SAXS) and macromolecular crystallography (MX) for the period April - December 2018. The following EMBL/DESY

Re: [ccp4bb] domain prediction of a membrane protein

2017-12-11 Thread Robert Stroud
If the protein is eukaryotic you may need to express it in eukaryotic cells, probably with a tag for later identification / purification of the fragments. This might work for a plasma membrane protein, -but if the protein is from an internal organelle then to find the correct topology you may ne

[ccp4bb] BCA BSG Winter Meeting

2017-12-11 Thread Mark Roe
Dear All, Registration (https://registrations.hg3conferences.co.uk/bcabsg17) is open for the BSG Winter Meeting next Monday (18th) at the Cavendish Labs, Cambridge. The meeting is aimed at giving the audience an insight into the "joy and pain" of protein crystallographic/structural biology rese