[ccp4bb] Call open for BAG beamtime at DESY beamline P11, PETRA III

2020-06-16 Thread Hakanpää , Johanna
Dear all, The call is now open for Block Allocation Group (BAG) proposals for DESY beamline P11 at the PETRA III synchrotron in Hamburg. Proposals are to be submitted via https://door.desy.de The deadline for submission is -- Monday, 13 July 2020 (

Re: [ccp4bb] Phaser Warning Message

2020-06-16 Thread Damian Ekiert
Hi Silvia, Looking at the end of the log file, it looks like you have a very clear solution and are ready to go! This message means that a better solution from the Fast Translation Function was excluded because it failed the packing test (too many clashes with neighboring molecules). Sometimes

[ccp4bb] Deadline Thursday June 18: Facility Manager for CPHSAXS at Department of Drug Design and Pharmacology, Faculty of Health and Medical Sciences, University of Copenhagen Denmark

2020-06-16 Thread Michael Gajhede
We are looking for a highly motivated and independent academic research staff for a position as facility manager for a new In-House bioSAXS facility CPHSAXS funded by the Novo Nordisk Foundation. The position is available from August 1 2020 or as soon as possible thereafter until the end of 2

Re: [ccp4bb] COOT 0.9 cuts pdb header

2020-06-16 Thread Paul Emsley
On 16/06/2020 11:17, Dirk Maurer wrote: Hi, Hi. I noticed that, while saving my pdb model in COOT 0.9, sometimes a big part of the header (compared to the originally loaded file) is just left out in the new pdb-file. This results in that COOT cannot reopen this file at another time. Any id

[ccp4bb] COOT 0.9 cuts pdb header

2020-06-16 Thread Dirk Maurer
Hi, I noticed that, while saving my pdb model in COOT 0.9, sometimes a big part of the header (compared to the originally loaded file) is just left out in the new pdb-file. This results in that COOT cannot reopen this file at another time. Any ideas how I can fix this? Best regards Dirk ##

Re: [ccp4bb] Question about Refmac

2020-06-16 Thread Eleanor Dodson
Thank you for cell. For P32 21 2 spacegroup with this cell the only higher Laue symmetry you could generate is P6/mmm, so as Jonathan says I wouldnt worry about the FreeR assignment.. I can look at possible NCS operators if you like - the most informative output is to run MOLREP Self Rotation on yo

[ccp4bb] Deadline Thursday June 18: Facility Manager for CPHSAXS at Department of Drug Design and Pharmacology, Faculty of Health and Medical Sciences, University of Copenhagen Denmark

2020-06-16 Thread Michael Gajhede
We are looking for a highly motivated and independent academic research staff for a position as facility manager for a new In-House bioSAXS facility CPHSAXS funded by the Novo Nordisk Foundation. The position is available from August 1 2020 or as soon as possible thereafter until the end of 2024

Re: [ccp4bb] Questions regarding MTZFIX and EDSTATS

2020-06-16 Thread Ian Tickle
Hi Joao Can you post the mtzdmp output? Cheers Ian On Tue, 16 Jun 2020, 09:30 Joao Ramos, wrote: > Dear Ian, > > I'm trying to use the edstats.pl script but I'm having problems with the > column labels. mtzdmp can read the mtz file, but edstats.pl gives me a > message saying that mtzfix can

Re: [ccp4bb] Questions regarding MTZFIX and EDSTATS

2020-06-16 Thread Joao Ramos
Dear Ian, I'm trying to use the edstats.pl script but I'm having problems with the column labels. mtzdmp can read the mtz file, but edstats.pl gives me a message saying that mtzfix cannot find the labels. I'm using a mtz file from a refinement job in Phenix. Best regards, Joao Ramos Ian Tickle

Re: [ccp4bb] Questions regarding MTZFIX and EDSTATS

2020-06-16 Thread Ian Tickle
Hi João In cases like this it's always a good idea to check whether you can read the same MTZ file with mtzdmp. If that fails with the same error message it means that the pathname/filename was indeed incorrectly specified, or it could possibly be a permissions issue (the file needs to be given r