[ccp4bb] Off topic, protein characterization and binding job opportunity in Boston area

2021-08-23 Thread Yanfeng Zhou
Hi, Sorry for the off topic post. If anyone is passionate about working in an exciting biotech powered by machine learning, structural biology, and protein engineering, around Boston in the US, please check the link below. https://www.linkedin.com/jobs/view/2662640332/efId=cCDvahCrRPGWslMQWMgEOQ%

[ccp4bb] AW: [ccp4bb] malonate and histidine interaction

2021-08-23 Thread Schreuder, Herman /DE
Hi Ana, If this histidine is part of the active site, you may want to look into the catalytic mechanism to see if this histidine could react with something like a malonate. Active site residues can do amazing things that normal residues cannot. If something from your protease inhibitor cocktail

[ccp4bb] AW: [ccp4bb] how to fix helices-sheets getting converted to coil,

2021-08-23 Thread Schreuder, Herman /DE
Hi Firdous, In general, display programs use the HELIX/SHEET records in the pdb and when these are missing, the programs generate the secondary structure themselves. If these HELIX/SHEET records are present for some part of the structure, but are missing for other parts, these other parts will s

[ccp4bb] Group leader position in Structural Systems Biology at EMBL Heidelberg

2021-08-23 Thread Christoph Mueller
Dear Colleagues, The interdisciplinary and highly collaborative Structural and Computational Biology Unit at EMBL Heidelberg, Germany, is looking to recruit a group leader that combines integrated structural biology approaches with chemical biology, (high-throughput) biochemistry or synthetic

Re: [ccp4bb] Entries pointed out on pubpeer

2021-08-23 Thread Kay Diederichs
Proteopedia (https://proteopedia.org/wiki/index.php/Main_Page) can be used for commenting individual PDB entries. See also https://proteopedia.org/wiki/index.php/Retractions_and_Fraud and https://proteopedia.org/wiki/index.php/Proteopedia:Comments_on_Published_Structures best wishes, Kay On S