[ccp4bb] postdoc position at Aarhus University

2022-09-19 Thread Gregers Rom Andersen
Applications are invited to apply for a 2-year post-doctoral research position based on a collaboration between the laboratories of Professors Gregers R Andersen (Structural biology) and Jan J Enghild (Protein chemistry and biochemistry) at The University of Aarhus in Denmark. Both groups are lo

[ccp4bb] AW: Help with isomer ligand from PDB database

2022-09-19 Thread Schreuder, Herman /DE
Dear Marion, If you read in your corrected .cif file in Coot or your refinement program, it will override the (default) CCP4 .cif file. You can also correct the installed CCP4 .cif file. I once did this. However, these changes are lost when you update the CCP4 installation, so best is to ask th

[ccp4bb] Multiplicity is more than 20

2022-09-19 Thread Prasun Kumar
Hi All: I have collected a dataset for a crystal of a 30 residues long helical peptide that makes a trimer in the solution. I also solved the structure to get a trimer. My issues start when I start preparing for a deposition. Details about the data: space group: I 21 3 Resolution: 1.6 Current

Re: [ccp4bb] Multiplicity is more than 20

2022-09-19 Thread Winter, Graeme (DLSLtd,RAL,LSCI)
Hi Prasun You just measured the reflections a lot. 33 is fine. More likely even with cubic space groups I’d love to know where you got the idea of the limit from. I have data sets with more than 100 fold multiplicity The R conversation I’ll leave to others Best wishes Graeme On 19 Sep 2022,

[ccp4bb] RES: [ccp4bb] Multiplicity is more than 20

2022-09-19 Thread Rafael Marques
Problematic is low multiplicity, not high, I’d say... Best Rafael Marques da Silva Mestre em Física Biomolecular Universidade de São Paulo Bacharel em Ciências Biológicas Universidade Federal de São Carlos phone: +55 16 99766-0021 "A sorte acompanha uma mente bem treinada"

Re: [ccp4bb] Multiplicity is more than 20

2022-09-19 Thread Dale Tronrud
Okay, I weigh in on the R factor issue... The free R that we calculate is only an estimate of the "true free R". What we really want to know is what would the R value be if there there was no "bias" to the atomic model. We make this estimate by pulling a subset of the data out of the r