Re: [ccp4bb] Ubuntu and Coot

And yet another quick update- I rebooted the machine again and now the ccp4 version of Coot is working, but the standalone version is not (and the Phenix version continues to work). Just thought I would throw this out there for others... cheers, tom From: CCP4 bu

Re: [ccp4bb] Ubuntu and Coot

Just an update- I tested using Coot through the Phenix package and that seems to work (version 1.21-5207-000 and version 0.9.8.93 of Coot). Maybe a version issue? Or Phenix just comes with libraries that ccp4 doesn't? Not sure yet. cheers, tom From: CCP4 bulletin

[ccp4bb] CryoEM Research Assistant position at MSKCC

Dear Colleagues, The Memorial Sloan Kettering Cancer Center in New York City has recently expanded its CryoEM Facility, and has an opening for a CryoEM Research Assistant. The CryoEM Facility specializes in macromolecular structure determination of proteins via single particle analysis. The f

Re: [ccp4bb] [EXTERNAL]Re: [ccp4bb] Modeling Disulfide Bond Occupancies

Thank you so much From: Eleanor Dodson Date: Monday, May 6, 2024 at 3:30 PM To: Liliana Margent Cc: CCP4BB@jiscmail.ac.uk Subject: [EXTERNAL]Re: [ccp4bb] Modeling Disulfide Bond Occupancies ***ATTENTION: This email came from an external source. Do not open attachments or click on links from un

[ccp4bb] 3 cryo-EM facility positions at Scottish Centre for Macromolecular Imaging, Glasgow, UK

On behalf of Dr James Streetley. Please pass all enquiries to him. Dear colleagues, The Scottish Centre for Macromolecular Imaging (SCMI) is Scotland’s national cryo-EM facility, based at the University of Glasgow. Using our JEOL CRYO ARM

Re: [ccp4bb] ccp4i2 stopped working (no startup) - advice?

Hi Andrea, concerning Log #1: there is a log file /home/athorn/.CCP4I2/status/status_1710775099.ccp4i2_status.xml, which is probably empty. If it is, then deleting it should resolve the error. I have seen this problem from time to time on students laptops, but could not figure out, for wh

[ccp4bb] ccp4i2 stopped working (no startup) - advice?

Dear all, My ccp4i2 installation stopped working - it does not start up properly anymore (see Log #1 below for the output). I started ccp4i which brought up the update manager and ran outstanding updates. This did not fix the issue. I also sourced the source file manually, just to make sure. The

Re: [ccp4bb] Ubuntu and Coot

Dear Tom, I am using basically the same setup (Linux Mint 21.3 Xfce based on Ubuntu 22.04, CCP4 8.0.019 including Coot 0.9.8.93). Everything works well on my computer. I did not have any issues with Coot even in CCP4 8.0.017. I am sorry I don't know the reason of the error... Cheers, Martin O