Re: [ccp4bb] Anisotropic Refinement Question

2007-02-12 Thread Arti S. Pandey
ead there is no need to refine the hydrogens > anisotropically. Is there a way to refine all atoms anisotropically > except hydrogens in REFMAC5? I would like to keep the hydrogens during > the refinement as they contribute to the R values. > > Sincerely, > Carlos > Arti S.

Re: [ccp4bb] Calculating ligand-protein binding energy and contact

2007-02-21 Thread Arti S. Pandey
e good programs out there ? I am aware of several > such > as AutoDock, Dock, Tinker, but they seem to be made for docking, I am > looking for > easy-to-get-easy-to-use binding energy/contact area calculator. > > Thanks for all you input ! > > Xu Tan > > University of Wa

Re: [ccp4bb] Multiple data sets in HKL2000]

2007-02-22 Thread Arti S. Pandey
State University (HSC) > Arti S. Pandey Graduate Student Chemistry and Biochemistry Montana State University Bozeman,MT 59717 Arti S. Pandey Graduate Student Chemistry and Biochemistry Montana State University Bozeman,MT 59717

[ccp4bb] monomer library in Refmac

2007-02-22 Thread Arti S. Pandey
l knowledge and guidelines for its use Acta Crystallographica Section D Biological Crystallography ISSN 0907-4449 Acta Cryst. (2004). D60, 2184-2195 Can a user use the default lib as well as the new ones. I am using ccp4-6.0.2. I would appreciate any help. Thank you. Arti S. Pandey Graduate Studen

[ccp4bb] previous message monomer library

2007-02-23 Thread Arti S. Pandey
for ONO. Arti Pandey Arti S. Pandey Graduate Student Chemistry and Biochemistry Montana State University Bozeman,MT 59717

Re: [ccp4bb] previous message monomer library [VASCL:A10EE53AD1F]

2007-02-23 Thread Arti S. Pandey
54 > > > Confidentiality Note: This e-mail, and any attachment to it, contains > privileged and confidential information intended only for the use of the > individual(s) or entity named on the e-mail. If the reader of this e-mail > is not the intended recipient, or the employee o

Re: [ccp4bb] shelxl/missing residues

2007-02-26 Thread Arti S. Pandey
I can call acetate ions. > > Thanks > Sam > > _ > Win a Zune™—make MSN® your homepage for your chance to win! > http://homepage.msn.com/zune?icid=hmetagline > Arti S. Pandey Graduate Student Chemistry and Biochemistry Montana State University Bozeman,MT 59717

Re: [ccp4bb] process SeMet labelled data

2007-03-01 Thread Arti S. Pandey
ghing.. Arti S Pandey > Hi Mark, > > although Shivesh's question was not very specific, and he should have > clearly given some more informations about what he would like to know, > he is probably a beginner in crystallography and simply asked for help > on this board. Not ev

Re: [ccp4bb] ANIS and SHELXL

2007-03-09 Thread Arti S. Pandey
Compare products and save at > MSN® > Shopping. > http://shopping.msn.com/default/shp/?ptnrid=37,ptnrdata=24102&tcode=T001MSN20A0701 > Arti S. Pandey Graduate Student Chemistry and Biochemistry Montana State University Bozeman,MT 59717

Re: [ccp4bb] B-factors in Shelxl

2007-03-16 Thread Arti S. Pandey
; Also, once I add water molecules with Coot (for example), how do I tell > Shelxl to refine them? It seems that it refuses to do it! > ATOM 7500 W HOH 4401 101.180 33.600 9.444 1.000 50.00 > > Thank you > > Eli :o) > > -- > Elisabetta Sabini, Ph.

Re: [ccp4bb] surface drawings

2007-03-16 Thread Arti S. Pandey
enough, but I haven't quite figured it out as of > yet. > > Thanks in advance for any advise. > Todd > Arti S. Pandey Graduate Student Chemistry and Biochemistry Montana State University Bozeman,MT 59717