For what it's worth, my own experience with the issue of scholarly publication
and open access is nuanced enough that perhaps my two-bits worth can add to
this discussion. In short, I agree both with Ian's previous message and with
Herbert, and feel that the incompatibility between them goes to
For some reason this news affects me deeply. I did not know Bill Lipscomb well,
but I interacted closely with James when he was in the UNC Computer Science
Department long ago, and members of the Colonel's scientific family have
impacted me positively any number of times. So, I share the sorrow
Once again, I've sent off a message only to one person that was intended for
the BB.
Begin forwarded message:
> From: "Charles W. Carter, Jr"
> Date: February 14, 2011 6:23:16 PM EST
> To: Martin Picard
> Subject: Re: [ccp4bb] AMP-PNP Hydrolysis
>
> I tak
Begin forwarded message:
> From: "Charles W. Carter, Jr"
> Date: January 6, 2011 10:51:20 AM GMT+01:00
> To: Gerard Bricogne
> Subject: Re: [ccp4bb] FW: [ccp4bb] Resolution and distance accuracies
>
> I echo Gérard's thought.
>
> Pascal Retailleau
I've run aground trying to find a program to write out individual pdb files
from a long file with multiple (>100) models. My file does not contain separate
chain IDs, so I cannot use moleman2 or splitpdb.p. I want to retain information
about ligands, and so do not want to use drussel's program.
> If the latter suffices and it is a one-off task, then I can do it for you. I
> have an API for this kind of thing, but it is not documented...yet.
>
> James
>
>
>
> On Aug 20, 2010, at 9:50 AM, Charles W. Carter, Jr wrote:
>
>> Is there a program that will re
Is there a program that will read in a pdb coordinate file and re-order the
side chain atoms in each residue according to a standard order?
I've a program that compares two files for the same structure, but requires
that the order of the atoms be the same in both cases. I'm using a variety of
DL, and Nature
> Publishing Group will do all it can to bring this situation to a successful
> conclusion as soon as possible.
>
> yours sincerely,
> Arianne Heinrichs
>
> Arianne Heinrichs, PhD
> chief editor Nature Reviews Molecular Cell Biology
>
>
>
>
> --
of letting Nature win this one. I have no assurance that my action
was the right one, but I similarly have no doubt that for me joining the
boycott was the only acceptable action for me.
Charlie
Begin forwarded message:
> From: "Charles W. Carter, Jr"
> Date: June 9, 2010 9:02:
I mistakenly sent this off to Enrico, rather than to the CCP4BB. Apologies to
Enrico.
Begin forwarded message:
> From: "Charles W. Carter, Jr"
> Date: May 6, 2010 6:50:23 AM EDT
> To: est...@cea.fr
> Subject: Re: [ccp4bb] control of nucleation
>
> In fact, ther
I'm trying to compile a fortran program (infac.f) to run under MacOSX.
It compiles and runs normally for some, but not all input
specifications. Often, instead of proceeding, it hangs.
I can find no evidence in either the gfortran or gdb manuals on how to
compile the source code so as to in
Begin forwarded message:
From: "Charles W. Carter, Jr"
Date: February 19, 2010 10:28:55 AM EST
To: "George M. Sheldrick"
Subject: Re: [ccp4bb] anomalous difference fourier maps
I'm also inclined to join this discussion. I agree with both Gérard
and George. I
Christian,
I happened to see your post to the CCP4 bulletin board. In answer to
your question, we continue to base all of our work on proper
experimental design. Two papers cited below document the flexibility
and power of response surface methods in biochemical experimentation,
especiall
Begin forwarded message:
From: "Charles W. Carter Jr." <[EMAIL PROTECTED]>
Date: November 15, 2008 9:51:36 AM EST
To: Boaz Shaanan <[EMAIL PROTECTED]>
Subject: Re: [ccp4bb] X-Ray versus NMR Structure
Boaz:
I have always and still fee that this paper is a landmark, b
Sun,
I'm most of the way to one side of this debate: I believe that it is
not possible to emerge fully from model bias without avoiding it in
the first place with experimental phases. I may be overly
pessimistic, but have considerable experience supporting at least
skepticism.
My inter
Is there a CCP4 program that will calculate residue-by-residue
correlation coefficients for a molecular replacement solution and an
experimentally phased map?
Thanks,
Charlie
**UNCrystallographers NOTE new website url**
[EMAIL PROTECTED]
http://xtal.med.unc.edu/CARTER
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