Re: [ccp4bb] Iphone app to display protein models

2012-01-27 Thread Jonathan Winger
On Jan 26, 2012, at 11:00 PM, Shiva Bhowmik wrote: > Dear All, > > I was wondering if there is any IOS5 based app to display protein models, > which are not in public database, on Iphone. There is an app called Molecules > for displaying models but that utilizes coordinates from RCSB and pubche

Re: [ccp4bb] Electron density improvement with resolution graphic

2009-12-04 Thread Jonathan Winger
James Holton has a great little movie showing how electron density changes with decreasing resolution: http://ucxray.berkeley.edu/~jamesh/movies/resolution.mpeg Jon On Dec 4, 2009, at 5:37 PM, Jim Fairman wrote: You can find one here on the Cambridge X-ray crystallography course website:

[ccp4bb] Depositing coordinates with riding hydrogens

2008-12-17 Thread Jonathan Winger
Hi all- Just wondering what the consensus is - should a structure refined with riding hydrogens be deposited with the coordinates for the hydrogens included? One could argue that, since they were used in the refinement to obtain the model and statistics reported, they should be included