I would also suggest using MolProbity to assess structure quality.
Best,
Nadir
Pr. Nadir T. Mrabet
Structural& Molecular Biochemistry
Nutrigenex - INSERM U-954
Nancy University, School of Medicine
9, Avenue de la Foret de Haye, BP 184
54505 Vandoeuvre-les-Nancy Cedex
France
Phone: +33 (0)3.83.
For drawing a 2D fold topology I'd suggest TopDraw (
http://www.ccp4.ac.uk/html/topdraw.html). To see if you structure looks
like other structures I'd look at the DALI server (
http://ekhidna.biocenter.helsinki.fi/dali_server/). Dali is pretty good for
digging out results/discussion fodder because
Hello everyone,
I have submitted one cysteine protease structure in PDB and now i have to
describe the structure completely for my PhD thesis. I know some web servers
who are good to provide knowledge about protein but i would like to ask expert
persons of this field as i am quite new in descri
