Re: [ccp4bb] Problem running BALBES

2009-01-29 Thread Jesse Sundlov
Thank you Fei for your input. Your response inspired me and I found the error I was making (a poorly truncated PDB file). However I have another question regarding BALBES for the brains out there. As I mentioned before, I have a two protein complex with a nice homology model for Protein 1 and

Re: [ccp4bb] Problem running BALBES

2009-01-29 Thread Dr. F Long
Dear Jesse, The current version of BALBES can only find MR models of a protein complex from its own internal database. I guess in your case, BALBES did not find the complex models (assembly as shown on the balbes log file). What you expect BALBES to do is under developing within the new version

[ccp4bb] Problem running BALBES

2009-01-28 Thread Jesse Sundlov
Hello All, I'm trying to use BALBES locally to perform molecular replacement on data of a two protein complex. Protein 1 is a truncated version of a two domain protein of known structure. Protein 2 has a homologous protein of known structure and ~50% identity. I'm having two related problems -