Re: [ccp4bb] ctruncate - FP=0?

2011-02-10 Thread Eleanor Dodson
Are you sure these are real FP=0 or reflections which werent measured but have been added for completeness of the h k l list. The check is whether the SigF is also 0.00 - in that case they are genuinely missing.. Eleanor On 02/09/2011 11:34 PM, Ed Pozharski wrote: I observe under some

Re: [ccp4bb] ctruncate - FP=0?

2011-02-10 Thread Ed Pozharski
Excellent point and no, these are not missing reflections. SigF is not zero. Also, if I am not mistaken, missing reflections in the MTZ format are recorded as NaN. Ed. On Thu, 2011-02-10 at 12:17 +, Eleanor Dodson wrote: Are you sure these are real FP=0 or reflections which werent

Re: [ccp4bb] ctruncate - FP=0?

2011-02-10 Thread Phil Evans
This does sound like a bug. If one of h,k,l are zero then the reflection is centric in P222 so the truncation will be different I just ran a test on an orthorhombic dataset (P212121) of mine and I do indeed see some strange F=0, sigF0 reflections, but in Charles Ballard's development version

[ccp4bb] ctruncate - FP=0?

2011-02-09 Thread Ed Pozharski
I observe under some conditions that ctruncate sets some reflections amplitudes to zero. AFAIU, this should not be happening as even negative intensities (there are none in this particular dataset) should produce FP0 upon truncation. 66 out of ~23000 reflections are zeros after ctruncate is