] On Behalf Of Ed Pozharski
Sent: Thursday, July 10, 2008 2:31 PM
To: CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] pdbset bug - seqres record
There is a bug in pdbset: when you output a sequence (using SEQU PDB), the
residue names are shifted to the left by one position. Here is how it looks
like
It seems to me that posting in ccp4bb is one of the correct ways to
report a problem. Am I wrong? The other option is to send it to
[EMAIL PROTECTED], but I assume that this address is subscribed to ccp4bb
anyway.
Ed.
Herewith the official line:
The correct way of reporting problems is
There is a bug in pdbset: when you output a sequence (using SEQU PDB),
the residue names are shifted to the left by one position. Here is how
it looks like:
In PDB-file downloaded from the PDB:
SEQRES 5 A 171 ALA THR CYS ...
PDBSET output:
SEQRES 5 A 171 ALA THR CYS ...
I
, 2008 2:31 PM
To: CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] pdbset bug - seqres record
There is a bug in pdbset: when you output a sequence (using SEQU PDB), the
residue names are shifted to the left by one position. Here is how it looks
like:
In PDB-file downloaded from the PDB:
SEQRES 5 A 171
