Dear all who answered,
the combination of
- compiling cctbx from source
- modifying the pymol startup script to source the cctbx setpaths.sh AND use
cctbx.python (instead of /usr/bin/python) eventually works.
Thanks to all the responses to make this work.
Tim
On Wed, Jun 23, 2010 at 01:02:03
On Wed, 23 Jun 2010 09:07:36 -0400 "Schubert, Carsten [PRDUS]"
wrote:
> Tim,
>
> I'm shooting from the hip here, but I think the problem is that cctbx
> comes with its own python, which you would need to run both pymol and
> numpy under. According to Ralf it is at least not trivial to utilize th
On Wed, Jun 23, 2010 at 8:21 AM, Graeme Winter wrote:
> There will be a cctbx.python dispatcher now which should set
> everything up - however if you source setpaths_debug I think this
> should make for a happy python as it includes everything from the
> dispatcher.
>
Don't use setpaths_debug -
ke sure its first in your path (may
>> >> be optional)
>> >> -install numpy under cctbx.python (if not already present)
>> >> -compile and install open.pymol against the cctbx.python, either via the
>> >> renaming trick
>> >> above or calling cctb
thon setup.py (build/install)
> >>
> >> Good luck, let us know how it works...
> >>
> >> Carsten
> >>
> >>
> >>
> >> > -Original Message-
> >> > From: CCP4 bulletin board [mailto:ccp...@jiscmail.a
setup.py (build/install)
>>
>> Good luck, let us know how it works...
>>
>> Carsten
>>
>>
>>
>> > -----Original Message-
>> > From: CCP4 bulletin board [mailto:ccp...@jiscmail.ac.uk] On Behalf Of
>> > Tim Gruene
>&
enaming trick
> above or calling cctbx.python setup.py (build/install)
>
> Good luck, let us know how it works...
>
> Carsten
>
>
>
> > -Original Message-
> > From: CCP4 bulletin board [mailto:ccp...@jiscmail.ac.uk] On Behalf Of
> > Tim G
rsten
> -Original Message-
> From: CCP4 bulletin board [mailto:ccp...@jiscmail.ac.uk] On Behalf Of
> Tim Gruene
> Sent: Wednesday, June 23, 2010 8:35 AM
> To: CCP4BB@JISCMAIL.AC.UK
> Subject: [ccp4bb] pymol python and cctbx
>
> Dear all,
>
> I've been t
Dear all,
I've been trying to install the SuperSym module for pymol (svn trunk version of
pymol as of today, 1.3.x). Upon restart the console says "Ooops! SuperSym
requires cctbx and numeric python to function. Please install these."
The system is i7 with Debian Testing 64bit with python2.5 (alt
