Re: [ccp4bb] real space refinement broken in COOT 0.9.8.8 EL?

2023-07-17 Thread David Lawson (JIC)
...@jic.ac.uk<mailto:david.law...@jic.ac.uk> From: Eugene Pichkur Sent: Monday, July 17, 2023 11:59 AM To: David Lawson (JIC) Cc: CCP4BB@jiscmail.ac.uk Subject: Re: [ccp4bb] real space refinement broken in COOT 0.9.8.8 EL? You don't often get email from eugene.pich...@gmail.com<mail

Re: [ccp4bb] real space refinement broken in COOT 0.9.8.8 EL?

2023-07-17 Thread Eugene Pichkur
Hi! Yes, it's been broken for a long time, but it will be fixed in Coot very soon [https://pemsley.github.io/coot/blog/2023/06/05/AA-RNA.html]. A workaround is to downgrade to CCP4 v. 8.0.006 (Coot v. 0.9.8.5) through the CCP4 Update Manager. Best, Eugene On Mon, Jul 17, 2023 at 1:45 PM David La

Re: [ccp4bb] real space refinement broken in COOT 0.9.8.8 EL?

2023-07-17 Thread Tsybovsky, Yaroslav (NIH/NCI) [C]
5 AM To: CCP4BB@JISCMAIL.AC.UK Subject: [EXTERNAL] [ccp4bb] real space refinement broken in COOT 0.9.8.8 EL? Hi All, Is it just me, but is real space refinement broken in COOT 0.9.8.8 EL? I am seeing this working through CCP4i2 (CCP4-8.0.012) and CCP4 cloud (v 1.7) on an M1 iMac (running Mont

[ccp4bb] real space refinement broken in COOT 0.9.8.8 EL?

2023-07-17 Thread David Lawson (JIC)
Hi All, Is it just me, but is real space refinement broken in COOT 0.9.8.8 EL? I am seeing this working through CCP4i2 (CCP4-8.0.012) and CCP4 cloud (v 1.7) on an M1 iMac (running Monterey 12.6.7). I am working on a protein-DNA complex and finding that often when I do real space refinement (wel