Re: [CF-metadata] proposed standard names for Enterococcus and Clostridium perfringens

2013-03-22 Thread Steve Emmerson
On 03/21/2013 02:12 PM, John Maurer wrote: I believe the canonical units in UDUNITS parlance would translate to m-3, which is what I find in the standard name table for other number_concentration_* quantities. Yup. If the dimension of the physical quantity is number per volume, then the SI

Re: [CF-metadata] New standard name: datetime_iso8601

2013-03-22 Thread Dave Allured - NOAA Affiliate
On Thu, Mar 21, 2013 at 1:14 PM, John Caron ca...@unidata.ucar.edu wrote: On 3/21/2013 11:17 AM, Chris Barker - NOAA Federal wrote: On Tue, Mar 19, 2013 at 5:21 PM, Dave Allured - NOAA Affiliate dave.allu...@noaa.gov wrote: You are making a set of technical use specifications, with

Re: [CF-metadata] New standard name: datetime_iso8601

2013-03-22 Thread Chris Barker - NOAA Federal
On Thu, Mar 21, 2013 at 12:14 PM, John Caron ca...@unidata.ucar.edu wrote: Ive always just worked with the W3C profile of ISO8601 http://www.w3.org/TR/NOTE-datetime So theres the question of supporting full ISO8601, or just a profile. That looks like a good profile to me -- and documented,

Re: [CF-metadata] New Standard Names for Satellite Data

2013-03-22 Thread Cameron-smith, Philip
Hi Aleksandar, I don't think anyone has responded to your email below, so I am responding, in part, so it doesn't get lost in the recent blizzard of emails on other topics :-). I still much prefer the alternative that was proposed: time_sample_interval_due_to_collocation I think this is

Re: [CF-metadata] proposed standard names for Enterococcus and Clostridium perfringens

2013-03-22 Thread Lowry, Roy K.
Dear All, I see Pandora's Box opening before us. I have been down the road of setting up my equivalent to Standard Names (the BODC Parameter Usage Vocabulary) with concepts that include specification of the biological entity, which is why I have a vocabulary with getting on for 30,000

Re: [CF-metadata] proposed standard names for Enterococcus and Clostridium perfringens

2013-03-22 Thread Steve Emmerson
On 03/22/2013 03:57 AM, Lowry, Roy K. wrote: An additional point is that I would prefer not to have the semantics of what was measured encoded into the units of measure. I couldn't agree more. The NIST also agrees. See sections 7.4 and 7.5 of http://physics.nist.gov/Pubs/SP811/sec07.html.

Re: [CF-metadata] [sdn2-tech] RE: proposed standard names for Enterococcus and Clostridium perfringens

2013-03-22 Thread Neil Holdsworth
Hi Roy, First off, i thought ICES tried to persuade you way before SDN that this was perhaps not the right approach ;) Anyway, I would agree that the species entity needs to be separated from the 'standard name'. I think discussions in SDN tech about the draft biological format for ODV would

Re: [CF-metadata] [sdn2-tech] RE: proposed standard names for Enterococcus and Clostridium perfringens

2013-03-22 Thread Klaas Deneudt
Hi, since my knowledge on standard name conventions is limited I am not well placed to give input on the raised request for a new item in the list. However I share the concern to include the biological entity in the Standard Name. Am I wrong If I say that the suggested

[CF-metadata] Question from NODC about interplay of standard name modifiers, cell_methods, etc.

2013-03-22 Thread Jonathan Gregory
Dear Ken The cell_methods would indicate standard deviation. This allows you to say whether you mean standard deviation over time, latitude, longitude or whatever dimension, so it's more precise - which one do you mean, in fact? By the way, in cell_methods there should be a space after : e.g.

Re: [CF-metadata] Question from NODC about interplay of standard name modifiers, cell_methods, etc.

2013-03-22 Thread Steve Hankin
Hi Ken, As hoped, Jonathan, has already responded. I'm off on a tangent here ... I want here to comment on a *wee* (and admittedly debatable) side metadata issue -- the proper use of the long_name attribute. The long_name is typically used as the source of a title string for plots and

Re: [CF-metadata] Question from NODC about interplay of standard name modifiers, cell_methods, etc.

2013-03-22 Thread Chris Barker - NOAA Federal
On Fri, Mar 22, 2013 at 11:05 AM, Jonathan Gregory j.m.greg...@reading.ac.uk wrote: The cell_methods would indicate standard deviation. This allows you to say whether you mean standard deviation over time, latitude, longitude or whatever dimension, so it's more precise - which one do you mean,

Re: [CF-metadata] Question from NODC about interplay of standard name modifiers, cell_methods, etc.

2013-03-22 Thread Kenneth S. Casey - NOAA Federal
Steve,It is a good point you make and we can revisit our long_names used in this product (our netCDF files are still in development). I think the parameter like sea water temperature (it is not actually SST) was left out since there are many of these files, each with a different parameter

Re: [CF-metadata] Question from NODC about interplay of standard name modifiers, cell_methods, etc.

2013-03-22 Thread Kenneth S. Casey - NOAA Federal
Chris,On Mar 22, 2013, at 3:38 PM, Chris Barker - NOAA Federal chris.bar...@noaa.gov wrote:On Fri, Mar 22, 2013 at 11:05 AM, Jonathan Gregoryj.m.greg...@reading.ac.uk wrote:The cell_methods would indicate standard deviation. This allows you to saywhether you mean standard deviation over time,

Re: [CF-metadata] New standard name: datetime_iso8601

2013-03-22 Thread Seth McGinnis
Hi all, I'm a bit late to the discussion, but I just want to go on the record as being (fairly strongly) opposed to allowing *anything* to be expressed as a string if there's a reasonable numeric representation we can use instead. Maybe I'll change my mind after the community has made the jump

Re: [CF-metadata] New Standard Names for Satellite Data

2013-03-22 Thread Aleksandar Jelenak - NOAA Affiliate
Hi Philip, On Fri, Mar 22, 2013 at 3:48 AM, Cameron-smith, Philip cameronsmi...@llnl.gov wrote: I don't think anyone has responded to your email below, so I am responding, in part, so it doesn't get lost in the recent blizzard of emails on other topics :-). Thank you very much! I was

Re: [CF-metadata] New Standard Names for Satellite Data

2013-03-22 Thread John Graybeal
Agree 'collocation' is dominant in my experience as well. Note the name says interval, but the definition says difference. To me the term 'difference' is more appropriate, as 'interval' has a connotation of recurrence. That said, if no one else finds this worth emphasizing, I'll concur with

Re: [CF-metadata] New Standard Names for Satellite Data

2013-03-22 Thread Aleksandar Jelenak - NOAA Affiliate
On Fri, Mar 22, 2013 at 5:03 PM, John Graybeal jgrayb...@ucsd.edu wrote: Note the name says interval, but the definition says difference. To me the term 'difference' is more appropriate, as 'interval' has a connotation of recurrence. Nice catch! Yes, difference sounds better to me, too. So:

Re: [CF-metadata] New standard name: datetime_iso8601 (Seth McGinnis)

2013-03-22 Thread Schultz, Martin
Dear Seth, I believe your concerns nicely confirm Michael's and my viewpoint that the real issue is a lack of functionality in the underlying netcdf library. If done properly, the datetime representation in the file would of course be numerical (python and certainly most other languages

Re: [CF-metadata] New Standard Names for Satellite Data

2013-03-22 Thread Cameron-smith, Philip
-Original Message- From: Aleksandar Jelenak - NOAA Affiliate [mailto:aleksandar.jele...@noaa.gov] Sent: Friday, March 22, 2013 2:06 PM To: John Graybeal Cc: Cameron-smith, Philip; cf-metadata@cgd.ucar.edu Subject: Re: [CF-metadata] New Standard Names for Satellite Data On Fri,

Re: [CF-metadata] [sdn2-tech] RE: proposed standard names for Enterococcus and Clostridium perfringens

2013-03-22 Thread John Graybeal
I think the other obvious concern is that you could no longer use the standard name as the be-all and end-all of searching for comparable data. If the entity of interest, say the species, is in an auxiliary term, the search has to magically connect the standard name with the auxiliary term,