Re: [COOT] where did add alt conf go?

2008-10-03 Thread Bernhard Lohkamp
To edit the backbone angle: 1.) use the button from the 'old' Model/Fit/Refine dialog 2.) add the following line to the last list in your coot_toolbuttons.py file (in COOTDIR/share/coot/python; e.g. after ["Add alt conf", "altconf()", "Add alternative conformation", "add-alt-conf.svg"],): ["Edit

Re: [COOT] where did add alt conf go?

2008-10-03 Thread Jianghai Zhu
Where can I find the instructions to add/delete buttons onto the toolbar? I particularly need the "backbone torsion angle" recently. Could somebody share the information? Thanks. -- Jianghai On Aug 2, 2008, at 4:57 AM, Bernhard Lohkamp wrote: As Paul already mentioned in this thread

Re: [COOT] Atoms

2008-10-03 Thread Phil Evans
It would seem sensible to do this if the element column is not present (which of course it should be ...) Phil On 3 Oct 2008, at 10:33, Paul Emsley wrote: It turns out that Eugine Krissinel is way ahead of me - in mmdb he provides a flag to fix up the missing elements. This is non-optiona

Re: [COOT] Atoms

2008-10-03 Thread Paul Emsley
It turns out that Eugine Krissinel is way ahead of me - in mmdb he provides a flag to fix up the missing elements. This is non-optionally done now in 0.5.1-pre-1 and following versions. Paul Charlie Bond wrote: How straightforward would it be to modify coot to automatically 'run pdbset' on