[COOT] Export residue density fit values to file

2009-02-25 Thread Sander Nabuurs
Dear all, Is there a way in Coot to export the Residue Density Fit values as calculated by the Validate Density fit analysis to a text file? Basically a simple output with residue number and density fit value would suffice. I've been looking into the different scripting possibilities of Coot,

Re: [COOT] Key-binding for changing active map/molecule color

2009-02-25 Thread Paul Emsley
Victor Alves wrote: Hi I have looked at the reference manual and can't seem to find a way to fulfill my desire to change colors of the active map or molecule at key-press. All the commands I found use imol which means you have to know the exact number. If you're launching Refmac from

Re: [COOT] Key-binding for changing active map/molecule color

2009-02-25 Thread Judit Debreczeni
2009/2/24 Victor Alves vdal...@fmv.utl.pt: Hi I have looked at the reference manual and can't seem to find a way to fulfill my desire to change colors of the active map or molecule at key-press. All the commands I found use imol which means you have to know the exact number. If you're

Re: [COOT] Key-binding for changing active map/molecule color

2009-02-25 Thread Victor Alves
Dear Paul and Judit Thank you so much! Its a pleasure doing business with you :-) Victor - Victor Alves, DVM, PhD Auxilliary Professor Veterinary Medicine Faculty - UTL Lisbon, Portugal Quoting Paul Emsley paul.ems...@bioch.ox.ac.uk: Hi

[COOT] Stereo projection with Coot

2009-02-25 Thread Evan Kantrowitz
Does anyone know if Coot will work with the DepthQ 3D projector (www.depthq.com) and an appropriate NVIDIA graphics card, such as the FX3700?

Re: [COOT] Stereo projection with Coot

2009-02-25 Thread Schubert, Carsten [PRDUS]
Yep it does. On linux there may be issues, because the drivers may or may not support swap-eyes. The problem is that the images are out of sync with the glasses, or to be more precise, the left image is displayed when the right shutter on the glasses is open. That was the case with the version

Re: [COOT] Stereo projection with Coot

2009-02-25 Thread Paul Emsley
Schubert, Carsten [PRDUS] wrote: Yep it does. On linux there may be issues, because the drivers may or may not support swap-eyes. The problem is that the images are out of sync with the glasses, or to be more precise, the left image is displayed when the right shutter on the glasses is open.

Re: [COOT] python or scheme?

2009-02-25 Thread Paul Emsley
Markus Dehnhardt wrote: Dear cooters, I am new to coot, but I have already discovered how powerful extensions and key bindings can be. My question is quite simple: if I want to generate my own extension or keybinding, which scripting language is better suited? I am not very familiar with

Re: [COOT] python or scheme?

2009-02-25 Thread Judit Debreczeni
2009/2/25 Frank von Delft frank.vonde...@sgc.ox.ac.uk: I'm totally not with Paul on this one (is scheme object-oriented???), and eternally grateful to him and Bernhard for implementing python scripting. I think that the point was that scheme is not imperative and not particularly

[COOT] OS X coot-0.6-pre-1-revision-1876 - minor bug

2009-02-25 Thread Scott Classen
I just upgraded via fink and now in the Display Manager I am unable to chose which map to bind to the scroll wheel. I can properly bind using the HID--ScrollWheel--Attach scroll wheel to which map? pulldown, but not from the radio button in the Display Manager window. Thanks, Scott