Re: [COOT] Torsion restraint not working & auto connect backbone with gaps

2011-10-20 Thread Bernhard Lohkamp
Dear Longfei, I am a member of SBGrid Consortium, recently we have two users' bug report about pre 0.7 coot (0.7-pre-1-628), their original post are listed below: Not sure which version you are referring to, but I assume you meant 3628 (rather than 628). 1) Problem: Torsion angle restraint

Re: [COOT] key binding on OS X 10.7

2011-10-20 Thread Bernhard Lohkamp
Dear Jianghai, are other keybindings working? I have recognised some time ago that the different forms of brackets (depending on keyboard layout etc) are not working as expected. Never got round fixing it though. Maybe I should move it up the list. For now I recommend you to use another charac

Re: [COOT] XML-RPC interface?

2011-10-20 Thread Bernhard Lohkamp
Just for completeness: There is another way to remotely connect to Coot, using sockets. This is used in remote_control.py and create_server.py (supplied with Coot). However, I have to admit that the documentation is not good (existent). It has been on my list for years Nat's xml-rpc interfa

[COOT] Torsion restraint not working & auto connect backbone with gaps

2011-10-20 Thread Longfei Wang
Dear Coot author and users, I am a member of SBGrid Consortium, recently we have two users' bug report about pre 0.7 coot (0.7-pre-1-628), their original post are listed below: 1) Problem: Torsion angle restraints are no longer functioning in real space refinement. Specifically, torsion angle rest

[COOT] key binding on OS X 10.7

2011-10-20 Thread Jianghai Zhu
Hi, I am using COOT 0.7-pre-1 (revision 3632) under OS X 10.7.2. COOT was compiled using fink. I have Paul's key binding set in my .coot file. All the key bindings were correctly loaded into COOT since I can see all user-defined key bindings in Extension -> Settings... -> Key Bindings...

Re: [COOT] XML-RPC interface?

2011-10-20 Thread Nat Echols
On Thu, Oct 20, 2011 at 10:42 AM, Francis E Reyes < francis.re...@colorado.edu> wrote: > Hi cooters > > Is there an xml-rpc interface for coot? Is it documented (somewhere)? > > I would love an example of loading maps/pdbs. > I've been doing this in PHENIX for a couple of years. Look at $PHENIX/

[COOT] XML-RPC interface?

2011-10-20 Thread Francis E Reyes
Hi cooters Is there an xml-rpc interface for coot? Is it documented (somewhere)? I would love an example of loading maps/pdbs . Thanks! F - Francis E. Reyes M.Sc. 215 UCB University of Colorado at Boulder