Bug#982384: [Help] Bug 982384: Warnings profile count data file not found

2022-12-06 Thread Nilesh Patra
On 5 December 2022 9:24:10 pm IST, Helmut Grohne wrote: >> Am Mon, Dec 05, 2022 at 05:25:03PM +0530 schrieb Nilesh Patra: >> > I simply applied patch supplied by Helmut to make build cross-buildable. >> > Please check Bug#989942 for the explanation and context. > &

Bug#982384: [Help] Bug 982384: Warnings profile count data file not found

2022-12-05 Thread Nilesh Patra
e option, particularly if cross compilation >> is otherwise possible. > >Since git blames you about last changes on the lines with the option in >question could you please comment about this? I simply applied patch supplied by Helmut to make build cross-buildable. Please check Bug#989942 for the explanation and context. -- Best, Nilesh

Bug#1024425: python-pysam ftbfs with python3.11 reduced severity

2022-11-30 Thread Nilesh Patra
, or a last time when python3.10 is to be > dropped. Unfortunately this is a rabbit hole, and breaks other stuff, see Bug#1025116. Ofcourse, there is a work around for that bug as well (i.e. just test with default pyvers) but, this would need fixing soonish* * T applied -- Best, Nilesh s

Bug#1024954: librcsb-core-wrapper: (autopkgtest) needs update for python3.11: initialization of CorePyWrap raised unreported exception

2022-11-28 Thread Nilesh Patra
ful from this either. I also found similar bug reports on a few git hub projects, without any closure/conclusion, for instance this one[1] Could someone on the list please help fix this/point towards the right direction to check so this can be debugged ny further? [1]: https://github.com/hs

Bug#1024986: python-biopython: does not vendor bindings for python3.11 yet

2022-11-28 Thread Nilesh Patra
, Nilesh -- System Information: Debian Release: bookworm/sid APT prefers testing APT policy: (990, 'testing') Architecture: amd64 (x86_64) Kernel: Linux 6.0.0-4-amd64 (SMP w/8 CPU threads; PREEMPT) Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8), LANGUAGE not set Shell: /bin/sh

Bug#1024985: RM: ntcard [armel armhf i386 mipsel s390x] -- ROM; Transitive B-D btllib un-supported on 32-bit

2022-11-28 Thread Nilesh Patra
://github.com/bcgsc/btllib/issues/62#issuecomment-1295671711 Therefore, ntcard can not build any more on these archs since libnthash-dev is unavailable on these architectures (a separate RM bug for nthash had been filed and processed already) Hence please remove ntcard from these archs. Thanks! Nilesh

Bug#1024982: genometools: Please enable build on all architectures

2022-11-27 Thread Nilesh Patra
nt packages. genometools is arch dependent. It should be "any" instead of all. Also, it should be done for all binary packages that src:genometools vendors, not just for the bin:genometools package. I have removed the patch tag. Thanks for bringing this to attention. -- Best, Nilesh signature.asc Description: PGP signature

Bug#1020576: please update sage for pari 2.15.0 and gap 4.12.0

2022-11-27 Thread Nilesh Patra
On Sun, Nov 27, 2022 at 05:35:17PM +, Tobias Hansen wrote: > On 11/27/22 06:37, Nilesh Patra wrote: > > Tobias, since this is done, would you consider to check sagemath now and > > get the ball rolling? :-) > > Hi, > > I actually tried building with the new pa

Bug#1020576: please update sage for pari 2.15.0 and gap 4.12.0

2022-11-26 Thread Nilesh Patra
ready been uploaded/taken care of[1], and it has built with pari 2.15 Tobias, since this is done, would you consider to check sagemath now and get the ball rolling? :-) [1]: https://tracker.debian.org/news/1388406/accepted-giac-19029dfsg2-1-source-into-unstable/ -- Best, Nilesh signature.asc Description: PGP signature

Bug#1024493: Proposed-RM: bs1770gain -- RoQA; inappropriate content

2022-11-24 Thread Nilesh Patra
asons not related to technical aspect. In the end, you will do what you want (i.e. maybe removing the package and I know that) but I just wanted to speak up. (And I see this as a different case as compared to the fortunes-off thing as this does not spit that kind of virtiol onto user's termin

Bug#1023738: orthanc-dicomweb FTBFS with node-axios 1.1

2022-11-24 Thread Nilesh Patra
ooks like axios might be used for an http client which the dicomweb _probably_ aims at doing. So removing that file via your patch _might_ not be correct. But Sebastian is the best judge. Please let us know. -- Best, Nilesh signature.asc Description: PGP signature

Bug#1022307: status on t_coffee causing biopython ftbfs

2022-11-23 Thread Nilesh Patra
d transition? > This bug report should remain open to remind > us bring t-coffee tests back once #1022570 is solved. That sounds quite a reasonable thing to do, but we probably should also decrese the severity of this bug to "important" to let biopython be in testing once the cor

Bug#1024169: csound breaks csound-plugins autopkgtest: *** stack smashing detected ***: terminated

2022-11-22 Thread Nilesh Patra
emely* helpful. I have added relevant forwarded tag. Thanks! -- Best, Nilesh signature.asc Description: PGP signature

Bug#1023678: clasp: diff for NMU version 3.3.5-4.2

2022-11-21 Thread Nilesh Patra
me if I should cancel it. This is a science team package, and I am not quite sure if the uploader is gonna respond. I have granted you push access to the corresponding repo of this package. Will you please commit your NMU (after it is accepted) to the salsa repo? Thanks! -- Best, Nilesh signature.asc Description: PGP signature

Bug#1023731: BioC Transition blocked by new dependencies

2022-11-21 Thread Nilesh Patra
rather looks as updates of various packages disguised as an API change, and at least in debian land, to me it just appears as a broken tool config and not a real transition (like library transition, for example the recent onetbb one). -- Best, Nilesh signature.asc Description: PGP signature

Bug#1024557: python3-branca: __version__ "unknown" breaks folium

2022-11-21 Thread Nilesh Patra
-Depends: debhelper-compat (= 13), dh-python, python3, python3-setuptools, + python3-setuptools-scm, python3-jinja2, python3-six X-Python3-Version: >= 3.7 -- Best, Nilesh signature.asc Description: PGP signature

Bug#1024349: diffoscope -- Fails its autopkgtests blocking testing migration

2022-11-17 Thread Nilesh Patra
Package: diffoscope Version: 226 Severity: serious X-Debbugs-Cc: la...@debian.org Hi, diffocope fails its autopkgtest blocking testing migration both for itself and r-base[1]. _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = <

Bug#1023677: bart-cuda build depends on gcc-10 that should not be in bookworm

2022-11-17 Thread Nilesh Patra
losing. -- Best, Nilesh signature.asc Description: PGP signature

Bug#1023677: bart-cuda build depends on gcc-10 that should not be in bookworm

2022-11-17 Thread Nilesh Patra
On Thu, Nov 17, 2022 at 03:58:42PM +0100, Andreas Beckmann wrote: > On 17/11/2022 15.34, Nilesh Patra wrote: > > In that case, I am re-assigning this to nvidia-cuda-toolkit since nvcc > > needs to > > support gcc-12. > > Please tell this $VENDOR. > > >

Bug#1023677: bart-cuda build depends on gcc-10 that should not be in bookworm

2022-11-17 Thread Nilesh Patra
eing released. -- Best, Nilesh signature.asc Description: PGP signature

Bug#1021971: python3-pychopper: New upstream release available, but routine-update fails.

2022-11-16 Thread Nilesh Patra
Control: reopen -1 Looks like the bug report was for 2.7.2 release which has quite weird structure and it'll take a bunch of hacks to get this going. Reopening. -- Best, Nilesh signature.asc Description: PGP signature

Bug#1024010: compreffor FTBFS with Python 3.11 as supported version

2022-11-16 Thread Nilesh Patra
/longintrepr.h libpython3.11-dev: /usr/include/python3.11/cpython/longintrepr.h Was this really intended? -- Best, Nilesh signature.asc Description: PGP signature

Bug#1024170: mcl breaks roary autopkgtest: different output

2022-11-16 Thread Nilesh Patra
On 11/16/22 18:30, Andreas Tille wrote: Control: tags -1 pending Am Wed, Nov 16, 2022 at 05:35:12PM +0530 schrieb Nilesh Patra: $ debdiff mcl_14-137+ds-9.dsc mcl_22-282+ds-1.dsc 2>/dev/null | wc -l 51040 That's quite a lot of lines. Something definitely changed. And I found out w

Bug#1024170: mcl breaks roary autopkgtest: different output

2022-11-16 Thread Nilesh Patra
On Wed, Nov 16, 2022 at 05:30:21PM +0530, Nilesh Patra wrote: > On Wed, Nov 16, 2022 at 11:25:02AM +0100, Andreas Tille wrote: > > Am Tue, Nov 15, 2022 at 09:16:53PM +0100 schrieb Paul Gevers: > > > 2022/11/15 09:16:56 Cannot find the mcxdeblast executable, please ensure >

Bug#1024170: mcl breaks roary autopkgtest: different output

2022-11-16 Thread Nilesh Patra
l 51040 That's quite a lot of lines. Something definitely changed. [1]: https://packages.debian.org/sid/amd64/mcl/filelist -- Best, Nilesh signature.asc Description: PGP signature

Bug#1023987: RFS: golang-github-vektah-gqlparser/2.5.1-1 [ITP] -- Port of the parser from graphql-js into golang (library)

2022-11-14 Thread Nilesh Patra
kage to NEW with a copyright change. BTW, no need to create RFS bugs/uploads to mentors.d.n while asking for sponsorship in go-team. Sending an RFS mail to the list (like you did earlier) should be enough. Thank you. -- Best, Nilesh signature.asc Description: PGP signature

Bug#1023727: ITP: r-cran-timechange -- Efficient Manipulation of Date-Times

2022-11-08 Thread Nilesh Patra
Package: wnpp Severity: wishlist X-Debbugs-Cc: debian-de...@lists.debian.org Subject: ITP: r-cran-timechange -- Efficient Manipulation of Date-Times Package: wnpp Owner: Nilesh Patra Severity: wishlist * Package name: r-cran-timechange Version : 0.1.1 Upstream Author : Vitalie

Bug#1017871: shiny-server: server-function don't run

2022-11-06 Thread Nilesh Patra
ll does not work after putting in a lot of efforts :-//) -- Best, Nilesh signature.asc Description: PGP signature

Bug#1020135: numpy: FTBFS: AttributeError: 'UnixCCompiler' object has no attribute 'cxx_compiler'

2022-11-04 Thread Nilesh Patra
Control: tags -1 patch This was as simple as a reorder (again same as many py packages) It gets numpy building for me locally atleast. Please consider applying. diff --git a/setup.py b/setup.py index 9df459d..5bf727b 100755 --- a/setup.py +++ b/setup.py @@ -75,8 +75,8 @@ # Its presence/absence

Bug#1019613: ruby-capybara: FTBFS with ruby3.1: ERROR: Test "ruby3.1" failed: Failure/Error: raise LoadError, 'Capybara is unable to load `puma` for its server, please add `puma` to your project or sp

2022-11-03 Thread Nilesh Patra
Control: tags -1 moreinfo It builds fine for me locally. Could you please try a re-build? -- Best, Nilesh signature.asc Description: PGP signature

Bug#1023083: ITP: libquazip1-qt5 -- Qt/C++ wrapper over minizip - Version 1 (Qt5)

2022-10-29 Thread Nilesh Patra
On 10/30/22 09:38, Ben Westover wrote: Hello Nilesh, You're replying to an old message by Filippo; I'm not *trying* to do anything. I have already explained to Filippo that this is not the correct way to do that. Had you simply linked the bug report/alioth-list mails in your original ITP

Bug#1023083: ITP: libquazip1-qt5 -- Qt/C++ wrapper over minizip - Version 1 (Qt5)

2022-10-29 Thread Nilesh Patra
an adopt it. Why should the package be orphaned? > >> Again, my new package libquazip1-qt6 is not > >> related to the existing libquazip package or the Med Team. There are already some changes committed to git for version 1.1 in the med team package. If we happened to miss seeing this ITP, we might have ended up stepping on your toes. -- Best, Nilesh signature.asc Description: PGP signature

Bug#1023060: RM: nthash [armel armhf i386 mipsel s390x] -- ROM; B-D btllib un-supported on 32-bit

2022-10-29 Thread Nilesh Patra
/btllib/issues/62#issuecomment-1295671711 Hence please remove nthash from these archs. Thanks! Nilesh

Bug#1023059: RM: libnthash-dev [arch:all] -- ROM; architecture change from all to any

2022-10-29 Thread Nilesh Patra
! Nilesh

Bug#1022394: python-trustme: FTBFS: make: *** [debian/rules:4: clean] Error 1

2022-10-29 Thread Nilesh Patra
Dear Maintainer, I NMU'd this package since this is directly affecting key packages, and it is FTBFS for sometime by now. Please find the debdiff attached. I have also `dgit push`ed it. Thanks! -- Best, Nilesh diff -Nru python-trustme-0.9.0/debian/changelog python-trustme-0.9.0/debian

Bug#1023026: gavodachs: Fails it autopkgtest

2022-10-29 Thread Nilesh Patra
Source: gavodachs Version: 2.6+dfsg-1.1 Severity: serious X-Debbugs-Cc: oleb...@debian.org Hi gavodachs fails it's autopkgtest with permission errors: | createuser: error: creation of new role failed: ERROR: role "dachsroot" already exists | *** Error: While executing DB query: | | CREATE OR

Bug#1022772: 1.4.9+dfsg-2

2022-10-25 Thread Nilesh Patra
Source: btllib Version: 1.4.9+dfsg-1 Severity: important Control: forwarded -1 https://github.com/bcgsc/btllib/issues/62 Hi, btllib fails to build on i386, this affects nthash which B-D on it. https://buildd.debian.org/status/fetch.php?pkg=btllib=i386=1.4.9%2Bdfsg-2=121292=0

Bug#1022307: python-biopython: FTBFS: mv: cannot stat 'Tests/test_NACCESS_tool.py': No such file or directory

2022-10-24 Thread Nilesh Patra
to add it. I have hopefully compensated some of that with fixing several bugs in past days :)) -- Best, Nilesh signature.asc Description: PGP signature

Bug#1022307: python-biopython: FTBFS: mv: cannot stat 'Tests/test_NACCESS_tool.py': No such file or directory

2022-10-24 Thread Nilesh Patra
cp -a Tests > > /<>/.pybuild/cpython3_3.10/build; \ > > cd > > /<>/.pybuild/cpython3_3.10/build/Tests; \ > > env DIALIGN2_DIR=/usr/share/dialign > > EMBOSS_ROOT=/usr/lib/emboss > > HOME=/<>/.pybuild/cpython3_3.10/build/home python3.10 > > run_tests.py --offline > > /<>/.pybuild/cpython3_3.10/build/Tests/run_tests.py:33: > > DeprecationWarning: The distutils package is deprecated and slated for > > removal in Python 3.12. Use setuptools or check PEP 632 for potential > > alternatives -- Best, Nilesh signature.asc Description: PGP signature

Bug#1011656: flexbar ftbfs: cannot find tbb header

2022-10-24 Thread Nilesh Patra
Control: severity -1 serious Now that onetbb is default tbb lib in bookworm and unstable both, this bug can no longer be marked important. It is RC since flexbar can not build at the moment, raising accordingly. -- Best, Nilesh signature.asc Description: PGP signature

Bug#1022239: festival FTBFS: make[2]: *** [/usr/lib/speech_tools/config/rules/targets.mak:55: src] Error 2

2022-10-22 Thread Nilesh Patra
Control: tags -1 patch On Sat, Oct 22, 2022 at 05:07:54PM +0200, Samuel Thibault wrote: > Control: severity -1 wishlist > > Samuel Thibault, le sam. 22 oct. 2022 17:06:07 +0200, a ecrit: > > Nilesh Patra, le sam. 22 oct. 2022 20:09:05 +0530, a ecrit: > > > Command: dpkg

Bug#1022239: festival FTBFS: make[2]: *** [/usr/lib/speech_tools/config/rules/targets.mak:55: src] Error 2

2022-10-22 Thread Nilesh Patra
Source: festival Version: 1:2.5.0-8 Severity: serious X-Debbugs-Cc: sthiba...@debian.org Hi, Festival fails to build from source with: look at library Festival UniSyn.o us_prosody.o us_unit.o ps_synthesis.o us_mapping.o us_features.o Update library Festival UniSyn.o us_prosody.o us_unit.o

Bug#1022087: jellyfish: FTBFS with pkgconf

2022-10-21 Thread Nilesh Patra
>> https://github.com/pkgconf/pkgconf/commit/a61193c7236f5b240585c4f8eef6f452f1d9a7ee > >> but has not hit a release yet. > > > > Indeed applying the upstream patch fixes the testcase Nilesh provided. > > > > I have not tried rebuilding jellyfish with p

Bug#1022186: sonivox -- does not honor the nocheck profile while building

2022-10-21 Thread Nilesh Patra
-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8), LANGUAGE not set Shell: /bin/sh linked to /usr/bin/dash Init: systemd (via /run/systemd/system) LSM: AppArmor: enabled >From ee2eedcca81e36db113d2711328342ada166b18a Mon Sep 17 00:00:00 2001 From: Nilesh Patra Date: Fri, 21 Oct 2022 20:54:30 +0530 Subj

Bug#937234: trying to remove python2.7 from bookworm

2022-10-21 Thread Nilesh Patra
d freshly > > from VAC yesterday). > > One month went by, is there any progress to report? . and it is two months now, w/ nothing happening on this bug reoport. Mike, do you intend to get working on it? -- Best, Nilesh signature.asc Description: PGP signature

Bug#1020043: pillow: FTBFS: ModuleNotFoundError: No module named 'PIL'

2022-10-21 Thread Nilesh Patra
I have NMU'd and put the pakcage to the DELAY queue with 7-day delay. Let me know if I should cancel it or reduce the delay. On Thu, 13 Oct 2022 17:58:54 +0530 Nilesh Patra wrote: > diff --git a/debian/rules b/debian/rules > index 68e9a8c..96cc5ca 100755 > --- a/debian/rules > +++ b/

Bug#1022087: jellyfish: FTBFS with pkgconf

2022-10-20 Thread Nilesh Patra
SYSROOT_DIR=debian/tmp/ pkg-config --cflags jellyfish-2.0 -I/usr/include/jellyfish-2.3.0 This looks like a problem with pkgconf instead. Let me know if I am mistaken. If not, could you fix this, please? [1]: https://sources.debian.org/src/jellyfish/2.3.0-15/debian/rules/#L12 Thanks! -- Best, Nile

Bug#1022077: xwax -- FTCBFS due to not exporting host compiler

2022-10-19 Thread Nilesh Patra
Source: xwax Version: 1.8-1 Severity: normal Tags: patch X-Debbugs-Cc: s...@y0o.de Hi Dennis, xwax does not seem to have defined a proper compilation command and hence takes in the build arch compiler instead of host arch one. Please consider applying the patch which could help it cross-build.

Bug#1021895: pylint: fails to honor "--" argument

2022-10-17 Thread Nilesh Patra
Since this bug causes ionit to FTBFS and ionit is a dependency of lsb (key package) I will team-upload pylint if I don't get a response and/or it is not done within a week. Just a heads up. -- Best, Nilesh signature.asc Description: PGP signature

Bug#1021923: ionit: FTBFS dh_auto_test: error: pybuild --test -i python{version} -p 3.10 returned exit code 13

2022-10-17 Thread Nilesh Patra
gt; Test: Run pylint on Python source code. ... Running following command: > [...] This FTBFS occurs due to a bug in pylint which has been fixed upstream and needs fixing at debian end. I'll team-upload the fix in a week if no activity happens from maintainer's end. I am closing your bug.

Bug#1021895: pylint: fails to honor "--" argument

2022-10-16 Thread Nilesh Patra
am already in this commit[2]. Please - either apply this or upgrade to latest upstream (which is just one patch release later). [1]: https://ci.debian.net/data/autopkgtest/testing/amd64/i/ionit/27128934/log.gz [2]: https://github.com/PyCQA/pylint/commit/43ecd7dbf34d9a4ed0e3085a9c6e047a8326e131 Than

Bug#1021841: setbfree FTCBFS -- multiple reasons

2022-10-15 Thread Nilesh Patra
rom 131fbc61c9baf052d0693b7f7d63d69fcd970d14 Mon Sep 17 00:00:00 2001 From: Nilesh Patra Date: Sat, 15 Oct 2022 22:19:54 +0530 Subject: [PATCH] Get package cross-building --- debian/patches/cross.patch | 252 + debian/patches/series | 1 + debian/ru

Bug#997296: r-cran-rpf: FTBFS on hppa with gcc-11

2022-10-13 Thread Nilesh Patra
fixed 997296 1.0.11+dfsg-1 close 997296 stop This builds on hppa now with gcc-11 so closing. https://buildd.debian.org/status/logs.php?pkg=r-cran-rpf=hppa https://buildd.debian.org/status/fetch.php?pkg=r-cran-rpf=hppa=1.0.11%2Bdfsg-1=1635367343=0 -- Best, Nilesh

Bug#1020043: pillow: FTBFS: ModuleNotFoundError: No module named 'PIL'

2022-10-13 Thread Nilesh Patra
Control: tags -1 patch Hi, Please consider applying the patch pasted inline if deemed appropriate. I confirm that it fixes the build locally for me. Thanks! diff --git a/debian/rules b/debian/rules index 68e9a8c..96cc5ca 100755 --- a/debian/rules +++ b/debian/rules @@ -23,7 +23,7 @@

Bug#1021435: python3-matrix-common: matrix-synapse not starting due to ModuleNotFoundError: No module named 'matrix_common'

2022-10-08 Thread Nilesh Patra
LSM: AppArmor: enabled > > Versions of packages python3-matrix-common depends on: > ii python3 3.9.2-3 > ii python3-attr20.3.0-1 > ii python3-importlib-metadata 1.6.0-2 > > python3-matrix-common recommends no packages. > > python3-matrix-common suggests no packages. > > -- no debconf information > > -- Best, Nilesh signature.asc Description: PGP signature

Bug#951805: Help with glbinding

2022-10-05 Thread Nilesh Patra
Picking DM Andrea Pappacoda (Tachi's main key) with fingerprint 66DEF15282990C2199EFA801A8A128A8AB1CEE49 | Uploading nilesh-1664959544.dak-commands to ftp-master > If you prefer, I can publish my changes in a Salsa fork so > that you can take a look at them before trusting me too much :) T

Bug#1020041: zope.testrunner: FTBFS: AttributeError: 're.Pattern' object has no attribute 'replace'

2022-10-01 Thread Nilesh Patra
quot;'\''") > > AttributeError: 're.Pattern' object has no attribute 'replace' > > make[1]: *** [debian/rules:20: override_dh_python3] Error 1 This looks like a bug with dh-python itself. Maybe this needs to be "sub" instead of "replace", similar string regex replaces at a couple more places. Please let me know if I made a mistake here and this is not a bug in dh-python. -- Best, Nilesh signature.asc Description: PGP signature

Bug#1012893: [Help] anfo: ftbfs with GCC-12

2022-09-30 Thread Nilesh Patra
e that it needs more code changes and isn't a ~trivial bug to fix. If no one gets to it, asking for removal is a sensible option. It otherwise imho becomes another time sapping package that no one cares about much. -- Best, Nilesh

Bug#1015102: heudiconv: FTBFS: FAILED heudiconv/tests/test_heuristics.py::test_reproin_largely_smoke[--files /<>/.pybuild/cpython3_3.10_heudiconv/build/heudiconv/tests/data-reproin]

2022-09-29 Thread Nilesh Patra
hing " > "and -c specified so we did conversion already" > ) > with pytest.raises(RuntimeError): > runner(args) > > # but there should be nothing new > assert not ds.repo.dirty > > assert head == ds.repo.get_hexsha() > E AssertionError: assert '2c32d90c7252...452338c3a611a' == > '52121805b02b...b36be77769e34' > E - 52121805b02b454149686a4ae12b36be77769e34 > E + 2c32d90c7252c966ebdba876f6f452338c3a611a > > /<>/.pybuild/cpython3_3.9_heudiconv/build/heudiconv/tests/test_heuristics.py:93: > AssertionError > - Captured stdout call > - -- Best, Nilesh signature.asc Description: PGP signature

Bug#1020208: singularity-container: FTBFS: make[2]: *** [Makefile:181: singularity] Error 2

2022-09-25 Thread Nilesh Patra
On Sun, Sep 25, 2022 at 01:19:38PM +0800, Shengjing Zhu wrote: > Control: notfound -1 umoci/0.4.7+ds-3 > > On Sun, Sep 25, 2022 at 11:34 AM Nilesh Patra wrote: > > > > Control: found -1 singularity-container/3.10.2+ds2-3 > > Control: found -1 umoci/0.4.7+ds-3 > >

Bug#1020208: singularity-container: FTBFS: make[2]: *** [Makefile:181: singularity] Error 2

2022-09-24 Thread Nilesh Patra
. This and rootless-containers-proto-dev are the only two packages that changed in chroot. The failing code in the question does not stem from singularity-container. -- Best, Nilesh signature.asc Description: PGP signature

Bug#1020638: RM: khmer [arm64] -- ROM; Cannot build on !amd64 due to asm in cqf

2022-09-24 Thread Nilesh Patra
-3-source-into-unstable/ [2]: https://sources.debian.org/src/khmer/2.1.2%2Bdfsg-11/debian/control/#L48 Best, Nilesh

Bug#1020049: [notificati...@github.com: Re: [hhoeflin/hdf5r] datatype_export.c:1903:19: error: storage size of ‘myenum’ isn’t known (Issue #192)]

2022-09-22 Thread Nilesh Patra
[1]: https://github.com/hhoeflin/hdf5r/blob/master/src/1_10_0/datatype_export.c#L1867 -- Best, Nilesh signature.asc Description: PGP signature

Bug#1019513: node-jquery breaks r-cran-pkgdown autopkgtest: replacement has 11 rows, data has 10

2022-09-12 Thread Nilesh Patra
)' for some demos, 'help()' for on-line help, or > 'help.start()' for an HTML browser interface to help. > Type 'q()' to quit R. > > > library(testthat) > > library(pkgdown) > > > > test_check("pkgdown") > [ FAIL 8 | WARN 0 | SKIP 86 | PASS 514 ] > -- Best, Nilesh signature.asc Description: PGP signature

Bug#1017391: kpmcore: FTBFS on armel

2022-09-12 Thread Nilesh Patra
_gnu_cxx12_Lock_policyE1EE@Base > 22.04.3-1 > +#MISSING: 22.04.3-1# > _ZTVSt23_Sp_counted_ptr_inplaceI11SmartStatusSaIvELN9__gnu_cxx12_Lock_policyE2EE@Base > 22.04.3 > _ZZNSt19_Sp_make_shared_tag5_S_tiEvE5__tag@Base 22.04.3 > > _ZZZN10KAboutDataC4ERK7QStringS2_S2_S2_N13KAboutLicense10LicenseKeyES2_S2_S2_S2_Ed_NKUlvE_clEvE15qstring_literal@Base >

Bug#1014923: riseup-vpn: GUI seems stalled, no icon shown.

2022-09-04 Thread Nilesh Patra
please try if it works fine for you now? Looking forward to hear from you. -- Best, Nilesh signature.asc Description: PGP signature

Bug#1012219: Please adjust StanHeaders to new version of (one)tbb

2022-09-03 Thread Nilesh Patra
's a good indication), but I'd be thrilled to believe so. [1]: https://github.com/stan-dev/math [2]: https://github.com/stan-dev/math/commit/6f94b2a70d11276a53e5b5bc4100d3ffa524b96c -- Best, Nilesh OpenPGP_signature Description: OpenPGP digital signature

Bug#1017034: ITP: golang-github-marten-seemann-qtls-go1-19 -- Go standard library TLS 1.30 implementation, modified for QUIC (Go-1.19)

2022-08-29 Thread Nilesh Patra
done by you to get the go transition going to testing. Would it be OK if I add you in to Uploaders for this package? (Repository on salsa) PS: I also sent a question to the debian go ML pertaining to this package. -- Best, Nilesh signature.asc Description: PGP signature

Bug#1018701: ITP: golang-github-marten-seemann-qtls-go1-19 -- Go standard library TLS 1.3 implementation, modified for QUIC (Go-1.19)

2022-08-29 Thread Nilesh Patra
Package: wnpp Severity: wishlist Owner: Nilesh Patra * Package name: golang-github-marten-seemann-qtls-go1-19 Version : 0.1.0-1 Upstream Author : Marten Seemann * URL : https://github.com/marten-seemann/qtls-go1-19 * License : BSD-3-clause Programming Lang

Bug#1018694: [udd] upload_date stalled

2022-08-28 Thread Nilesh Patra
Package: qa.debian.org Severity: normal X-Debbugs-Cc: eribe...@debian.org Hi, The last upload_date that I can see from `bapase' seems to be 17th of August. Same case while checking `date' from `upload_history'. Could you consider checking what might be wrong? Best, Nilesh

Bug#1017247: golang-github-gatherstars-com-jwz: FTBFS: dh_auto_test: error: cd _build && go test -vet=off -v -p 8 github.com/gatherstars-com/jwz github.com/gatherstars-com/jwz/examples/visualize retur

2022-08-27 Thread Nilesh Patra
On 8/27/22 15:32, Nilesh Patra wrote: On 8/25/22 22:47, Robin Jarry wrote: Hey Nilesh, Nilesh Patra, Aug 25, 2022 at 14:20: This bug is causing an autoremoval warning for aerc. There does not seem to be a fix upstream about this. I am not sure what exactly is triggering this, but my hunch

Bug#1017247: golang-github-gatherstars-com-jwz: FTBFS: dh_auto_test: error: cd _build && go test -vet=off -v -p 8 github.com/gatherstars-com/jwz github.com/gatherstars-com/jwz/examples/visualize retur

2022-08-27 Thread Nilesh Patra
On 8/25/22 22:47, Robin Jarry wrote: Hey Nilesh, Nilesh Patra, Aug 25, 2022 at 14:20: This bug is causing an autoremoval warning for aerc. There does not seem to be a fix upstream about this. I am not sure what exactly is triggering this, but my hunch is it might be related to change in sort

Bug#1017247: golang-github-gatherstars-com-jwz: FTBFS: dh_auto_test: error: cd _build && go test -vet=off -v -p 8 github.com/gatherstars-com/jwz github.com/gatherstars-com/jwz/examples/visualize retur

2022-08-25 Thread Nilesh Patra
utf8internal > > internal/nettrace > > golang.org/x/net/html/atom > > crypto/internal/subtle > > crypto/subtle > > crypto/internal/boring/sig > > vendor/golang.org/x/crypto/cryptobyte/asn1 > > vendor/golang.org/x/crypto/internal/subtle > > runtime > > sync > > internal/reflectlite > > internal/testlog > > math/rand -- Best, Nilesh signature.asc Description: PGP signature

Bug#1016625: bart-cuda: FTBFS: redefinition of 'constexpr const _Tp std::integral_constant<_Tp, __v>::value'

2022-08-23 Thread Nilesh Patra
Control: reassign -1 nvidia-cuda-toolkit/11.4.3-4 Control: retitle -1 Please update nvidia-cuda-toolkit to 11.5.1 or later On 8/23/22 23:58, Martin Uecker wrote: Am Dienstag, den 23.08.2022, 23:45 +0530 schrieb Nilesh Patra: On Tue, Aug 23, 2022 at 07:00:44PM +0200, Martin Uecker wrote: I

Bug#1016625: bart-cuda: FTBFS: redefinition of 'constexpr const _Tp std::integral_constant<_Tp, __v>::value'

2022-08-23 Thread Nilesh Patra
On Tue, Aug 23, 2022 at 07:00:44PM +0200, Martin Uecker wrote: > > I think I fixed this. At least it compiles locally in > a sid pbuilder environment, but I needed to build-depend > on gcc-10. gcc-10 will be removed from the archive some day, so this cannot be a permanent fix. --

Bug#1015654: sambamba: ftbfs with LTO (link time optimization) enabled

2022-08-22 Thread Nilesh Patra
On Sat, Aug 13, 2022 at 03:58:38PM +0530, Nilesh Patra wrote: > Hi Matthias, > > On Tue, 19 Jul 2022 17:00:38 + Matthias Klose wrote: > > Package: src:sambamba > > > > ldc2: for the --flto option: Cannot find option named 'auto'! > > ldc2: Unknown command

Bug#1017292: r-cran-av: FTBFS: Error: package or namespace load failed for ‘av’ in dyn.load(file, DLLpath = DLLpath, ...):

2022-08-20 Thread Nilesh Patra
g=1=1=1=1#results > > A list of current common problems and possible solutions is available at > http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! > > If you reassign this bug to another package, please marking it as > 'affects'-ing > this package. See https://www.debian.org/Bugs/server-control#affects > > If you fail to reproduce this, please provide a build log and diff it with > mine > so that we can identify if something relevant changed in the meantime. > > -- Best, Nilesh signature.asc Description: PGP signature

Bug#1017237: sambamba: FTBFS: ../meson.build:9:0: ERROR: Unable to detect linker for compiler `ldc2 -L=--version /tmp/tmp1izbdod0.d -Wl,-z,relro -O -g -release -wi`

2022-08-19 Thread Nilesh Patra
> > Build type: native build > > Project name: Sambamba > > Project version: 0.8.2 > > - > > Detecting compiler via: cc --version > > compiler returned > > compiler stdout: > > cc (Debian 12.1.0-8) 12.1.0 > > Copyright (C) 2022 Free Software Foundation, Inc. > > This is free software; see the source for copying conditions. There is NO > > warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. > > > > > > compiler stderr: > > -- Best, Nilesh signature.asc Description: PGP signature

Bug#1017077: sets compiler and flags wrong for armhf

2022-08-19 Thread Nilesh Patra
code a bit, or maybe please provide a README.Debian, or atleast remove the no-op? > I'm currently traveling, so I'll look at this issue properly later. Sure. -- Best, Nilesh signature.asc Description: PGP signature

Bug#1017087: meson: All ldc related packages FTBFS with 0.63.1-1

2022-08-13 Thread Nilesh Patra
Package: meson Version: 0.63.1-1 Severity: serious X-Debbugs-Cc: jpakk...@gmail.com Hi, On building any d-lang package (which uses ldc in build) with new meson, it goes FTBFS with errors similar to the one pasted below. This was working fine just minutes before (with meson 0.63.0) Tried with

Bug#1015654: sambamba: ftbfs with LTO (link time optimization) enabled

2022-08-13 Thread Nilesh Patra
bug reports should be either updated or closed for time being. There are a few more ldc-related bugs (like for mir-core) Let me know what you'd think? -- Best, Nilesh signature.asc Description: PGP signature

Bug#1003165: scikit-learn testing migration

2022-08-13 Thread Nilesh Patra
://salsa.debian.org/science-team/scikit-learn/-/blob/master/debian/rules#L227 -- Best, Nilesh

Bug#1017077: sets compiler and flags wrong for armhf

2022-08-13 Thread Nilesh Patra
Package: dh-dlang Version: 0.6.5 Severity: important X-Debbugs-Cc: m...@debian.org Hi, dh-dlang seems to export flags for armhf incorrectly. ldc is supported on armhf and hence this should be exported if available however dh-dlang does not seem to honor that[1] Furthermore, it has a snippet in

Bug#1016732: node-sockjs throws: TypeError: Cannot read properties of undefined (reading 'addEventListener') at WebSocketReceiver.setUp

2022-08-10 Thread Nilesh Patra
Hi, Sorry to bother you over this again, but would you have any idea? I'd be OK with a workaround if you don't have the bandwidth at the moment, but this seems to come from coffee related modifications only. On Sun, 7 Aug 2022 11:42:45 +0530 Nilesh Patra wrote: > On 8/7/22 11:04 AM, Yadd wr

Bug#985026: python3-pulp: SyntaxWarning during package installation

2022-08-09 Thread Nilesh Patra
="? > if other is 0: return self > /usr/lib/python3/dist-packages/pulp/pulp.py:720: SyntaxWarning: "is" with a > literal. Did you mean "=="? > if other is 0: return self > > > Andreas > > -- Best, Nilesh signature.asc Description: PGP signature

Bug#1016625: bart-cuda: FTBFS: redefinition of 'constexpr const _Tp std::integral_constant<_Tp, __v>::value'

2022-08-07 Thread Nilesh Patra
~ > make[2]: *** [Makefile:332: /build/bart-cuda-0.7.00/src/wavelet/wl3-cuda.o] > Error 1 > > Andreas -- Best, Nilesh signature.asc Description: PGP signature

Bug#1016732: node-sockjs throws: TypeError: Cannot read properties of undefined (reading 'addEventListener') at WebSocketReceiver.setUp

2022-08-07 Thread Nilesh Patra
On 8/7/22 11:04 AM, Yadd wrote: On 06/08/2022 14:59, Nilesh Patra wrote: Yadd, Since you added in coffeescript patch for this package, I'd highly appreciate if you could consider taking a look. Hi, is there a test somewhere to see this error ? I'm not aware of any specific test that could

Bug#1016760: RM: golang-github-templexxx-xor -- ROM; superseded by templexxx-xorsimd

2022-08-06 Thread Nilesh Patra
have migrated to xorsimd. The removal has been ACK'ed by its uploader here[1] Hence, please consider removing this package from the archive. [1]: https://lists.debian.org/debian-go/2022/08/msg00015.html Best, Nilesh

Bug#1016732: node-sockjs throws: TypeError: Cannot read properties of undefined (reading 'addEventListener') at WebSocketReceiver.setUp

2022-08-06 Thread Nilesh Patra
Yadd, Since you added in coffeescript patch for this package, I'd highly appreciate if you could consider taking a look. On Sat, 06 Aug 2022 17:54:13 +0530 Nilesh Patra wrote: > Package: node-sockjs > Version: 0.3.24+~0.3.33-1 > Severity: serious > X-Debbugs-Cc: e...@ericebrown

Bug#1016732: node-sockjs throws: TypeError: Cannot read properties of undefined (reading 'addEventListener') at WebSocketReceiver.setUp

2022-08-06 Thread Nilesh Patra
Package: node-sockjs Version: 0.3.24+~0.3.33-1 Severity: serious X-Debbugs-Cc: e...@ericebrown.com Hi, On running shiny-server with 0.3.24+~0.3.33-1 it chokes with: | [2022-08-06T04:59:03.613] [ERROR] shiny-server - Uncaught exception: TypeError: Cannot read properties of undefined (reading

Bug#1016454: megadepth: autopkgtest failure on s390x: segmentation fault

2022-08-06 Thread Nilesh Patra
auc --min-unique-qual 10 > --annotation tests/test_exons.bed --frag-dist --alts --include-softclip > --only-polya --read-ends --test-polya --no-annotation-stdout > --no-auc-stdout --filter-out 260 --add-chr-prefix human > autopkgtest [04:42:40]: test run-unit-test > -- Best, Nilesh signature.asc Description: PGP signature

Bug#1016705: RM: golang-github-audriusbutkevicius-kcp-go -- ROM; un-needed, upstream repo pruned

2022-08-05 Thread Nilesh Patra
of golang-github-xtaci-kcp (in the archive) and the former does not seem to be of any use. The current maintainer(uploader) of the package(in X-debbugs-cc) has ACK'ed the removal -- I checked with them over private message. Best, Nilesh

Bug#1016677: ITP: golang-github-templexxx-cpu -- internal/cpu in Go ( add AVX512)

2022-08-04 Thread Nilesh Patra
Package: wnpp Severity: wishlist Owner: Nilesh Patra * Package name: golang-github-templexxx-cpu Version : 0.0.9-1 Upstream Author : Temple3x * URL : https://github.com/templexxx/cpu * License : BSD-3-clause Programming Lang: Go Description : Provides

Bug#1016676: ITP: golang-github-templexxx-xorsimd -- XOR code engine in pure Go, more than 270GB/S per core

2022-08-04 Thread Nilesh Patra
Package: wnpp Severity: wishlist Owner: Nilesh Patra * Package name: golang-github-templexxx-xorsimd Version : 0.4.1-1 Upstream Author : Temple3x * URL : https://github.com/templexxx/xorsimd * License : Expat Programming Lang: Go Description : XOR code

Bug#1002227: Move to templexxx-xorsimd? (Was: Bug#1002227: golang-github-templexxx-xor: FTBFS: dh_auto_test: error: cd obj-x86_64-linux-gnu && go test -vet=off -v -p 4 github.com/templexxx/xor returne

2022-08-04 Thread Nilesh Patra
On 8/5/22 1:18 AM, Shengjing Zhu wrote: On Fri, Aug 5, 2022 at 3:39 AM Nilesh Patra wrote: Hi, On 8/5/22 12:42 AM, Shengjing Zhu wrote: On Fri, Aug 5, 2022 at 3:09 AM Nilesh Patra wrote: Control: severity -1 important I am uploading a new revision shortly disabling this test so

Bug#1002227: Move to templexxx-xorsimd? (Was: Bug#1002227: golang-github-templexxx-xor: FTBFS: dh_auto_test: error: cd obj-x86_64-linux-gnu && go test -vet=off -v -p 4 github.com/templexxx/xor returne

2022-08-04 Thread Nilesh Patra
Hi, On 8/5/22 12:42 AM, Shengjing Zhu wrote: On Fri, Aug 5, 2022 at 3:09 AM Nilesh Patra wrote: Control: severity -1 important I am uploading a new revision shortly disabling this test so it allows revdeps to migrate atleast most which have nothing to do with the failing function test

Bug#1002227: Move to templexxx-xorsimd? (Was: Bug#1002227: golang-github-templexxx-xor: FTBFS: dh_auto_test: error: cd obj-x86_64-linux-gnu && go test -vet=off -v -p 4 github.com/templexxx/xor returne

2022-08-04 Thread Nilesh Patra
to it. -- Best, Nilesh signature.asc Description: PGP signature

Bug#1002227: Move to templexxx-xorsimd? (Was: Bug#1002227: golang-github-templexxx-xor: FTBFS: dh_auto_test: error: cd obj-x86_64-linux-gnu && go test -vet=off -v -p 4 github.com/templexxx/xor returne

2022-08-03 Thread Nilesh Patra
/runtime/panic.go:1198 +0x71 fp=0xc33638 > > > > sp=0xc33608 pc=0x433f11 > > > > runtime.sigpanic() > > > > /usr/lib/go-1.17/src/runtime/signal_unix.go:742 +0x2f6 > > > > fp=0xc33688 sp=0xc33638 pc=0x448696 > > > > github.com/templexxx/xor.xorSrc0({0xc1a288, 0x11, 0x11}, > > > > {0xc1a2a0, 0x11, 0x11}, {0xc1a2b8, 0x11, 0x11}) > > > > > > > > /<>/obj-x86_64-linux-gnu/src/github.com/templexxx/xor/sse2_amd64.s:43 > > > > +0x34 fp=0xc33690 sp=0xc33688 pc=0x4e7234 -- Best, Nilesh signature.asc Description: PGP signature

Bug#1014923: riseup-vpn: GUI seems stalled, no icon shown.

2022-08-03 Thread Nilesh Patra
onsider trying on latest updated testing/unstable system? > screenshot : https://share.riseup.net/#vR_qf95LpaIev2eWqrnavg PS: this link has expired Thanks for your bug report and I look forward to hear from you soonish. -- Best, Nilesh signature.asc Description: PGP signature

Bug#1016357: Fails tests with insufficient network connectivity

2022-08-01 Thread Nilesh Patra
On 8/1/22 8:38 PM, Shengjing Zhu wrote: On Mon, Aug 1, 2022 at 11:05 PM Nilesh Patra wrote: On Mon, Aug 01, 2022 at 10:54:20PM +0800, Shengjing Zhu wrote: The package fails tests (see log of failing test below) when run on a machine with limited network (in this case: Can only reach

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