Bug#902817: fail2ban: diff for NMU version 0.10.2-2.1

2018-09-24 Thread Yaroslav Halchenko
On Sun, 23 Sep 2018, Mattia Rizzolo wrote: > Control: tags 902817 + patch > Control: tags 902817 + pending > Dear maintainer, > I've prepared an NMU for fail2ban (versioned as 0.10.2-2.1) and > uploaded it to DELAYED/2. Please feel free to tell me if I > should delay it longer. I guess if

Bug#907806: How to disable tests for Python2 only?

2018-09-24 Thread Yaroslav Halchenko
On Mon, 24 Sep 2018, Andreas Tille wrote: > When you talked about new upstream version: Do you want to give 0.20rc1 I did give it a try... From the now empty list of https://github.com/scikit-learn/scikit-learn/issues/created_by/yarikoptic it might be that all of the ones I've filed are

Bug#908531: ITP: pynwb -- Python library for working with Neurodata in the NWB format

2018-09-10 Thread Yaroslav Halchenko
Package: wnpp Severity: wishlist Owner: Yaroslav Halchenko * Package name: pynwb Version : 0.4.1 Upstream Author : PyNWB Team * URL : https://github.com/NeurodataWithoutBorders/pynwb * License : BSD-3 with additional statement Programming Lang: Python

Bug#907806: How to disable tests for Python2 only?

2018-09-10 Thread Yaroslav Halchenko
On Mon, 10 Sep 2018, Andreas Tille wrote: > On Mon, Sep 10, 2018 at 10:54:02AM -0400, Yaroslav Halchenko wrote: > > Outstanding few issues so far are reported/dealt with upstream: > > https://github.com/scikit-learn/scikit-learn/issues?q=is%3Aopen+is%3Aissue+author%3Ayarikoptic+

Bug#907806: How to disable tests for Python2 only?

2018-09-10 Thread Yaroslav Halchenko
On Mon, 10 Sep 2018, Andrey Rahmatullin wrote: > On Mon, Sep 10, 2018 at 04:33:21PM +0200, Andreas Tille wrote: > > Hi, > > looking at the bug log of scikit-learn[1] it seems to be a simple means to > > do > > --- a/debian/control > > +++ b/debian/control > > @@ -20,6 +20,7 @@ Build-Depends:

Bug#907806: scikit-learn: FTBFS in buster/sid (could not import 'distributed')

2018-09-10 Thread Yaroslav Halchenko
FWIW - waiting on upstream to fixup issues I've reported leading to FTBFS of 0.20rc: https://github.com/scikit-learn/scikit-learn/issues?q=is%3Aopen+is%3Aissue+author%3Ayarikoptic+label%3ABlocker when done, will upload the 0.20 to address this one On Sun, 02 Sep 2018, Santiago Vila wrote: >

Bug#907978: ITP: mrtrix3 -- diffusion-weighted MRI white matter tractography

2018-09-04 Thread Yaroslav Halchenko
Package: wnpp Severity: wishlist Owner: Yaroslav Halchenko * Package name: mrtrix3 Version : 3.0~rc3+git86-g4b523b413 Upstream Author : Mrtrix3 Team * URL : http://www.mrtrix3.org * License : GPL-3 Programming Lang: C++ Description : diffusion-weighted

Bug#716538: [Mayhem] Bug report on mrtrix: read_ximg crashes with exit status 139

2018-08-24 Thread Yaroslav Halchenko
Thanks for the report and sorry for the silent. I can only confirm ATM that even the most recent in 0.2.x series 0.2.13 is exhibiting the same issue: $> ./crash.sh ./crash.sh: line 22: 22040 Segmentation fault env -i MALLOC_CHECK_=0 $GDB /usr/lib/mrtrix/bin/read_ximg "`cat

Bug#880245: New version of statsmodels is out possibly fixing important bug - any volunteer

2018-08-12 Thread Yaroslav Halchenko
Fwiw I will look into updating soon unless someone beats me to it On August 11, 2018 1:50:42 AM EDT, Andreas Tille wrote: >Hi, > >it seems upstream dealt with issue #3892 in latest upstream version >0.9. >As far as I can see this will fix #880245. > >Any volunteer to upgrade the package? > >Kind

Bug#902376: I would really appreciate if this simple RM was processed

2018-07-30 Thread Yaroslav Halchenko
thank you in advance -- Yaroslav O. Halchenko Center for Open Neuroscience http://centerforopenneuroscience.org Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755 Phone: +1 (603) 646-9834 Fax: +1 (603) 646-1419 WWW: http://www.linkedin.com/in/yarik

Bug#904359: pending

2018-07-27 Thread Yaroslav Halchenko
Tags +pending Sorry I caused us duplicate work. for a minor slip it wasn't uploaded to debian proper, I will build (now) and upload tomorrow morning cheers, -- Yaroslav O. Halchenko Center for Open Neuroscience http://centerforopenneuroscience.org Dartmouth College, 419 Moore Hall, Hinman

Bug#903438: RFA: asciinema -- Record and share your terminal sessions, the right way

2018-07-18 Thread Yaroslav Halchenko
Fwiw asciinema is quite handy! We use it for our demos (generate them automatically from our *cast scripts, along with possible narrated videos, actual scripts, or just interactive demonstrations where people get blown away at "my" typing speed/stability), see eg those asciinemas at

Bug#903213: datalad: FTBFS in stretch/buster/sid

2018-07-08 Thread Yaroslav Halchenko
Should be fixable, concerns only testing On July 8, 2018 9:02:07 AM EDT, Sean Whitton wrote: >Hello Santiago, > >On Sat, Jul 07 2018, Santiago Vila wrote: > >> This is just how the build ends in my autobuilder with >dpkg-buildpackage -A, >> but there are full build logs available here: >> >>

Bug#903213: datalad: FTBFS in stretch/buster/sid

2018-07-07 Thread Yaroslav Halchenko
I bet it is the security fix which was recently introduced... Would need a patch to datalad from https://github.com/datalad/datalad/pull/2670 Hopefully still easy to apply since datalad moved way far ahead since 0.4 . For buster/sid we will just release fresh version soon which would be

Bug#903202: please update to the next minor bugfix release 1.42

2018-07-07 Thread Yaroslav Halchenko
Package: rclone Version: 1.36-3 Severity: wishlist One of our (datalad) users reported needing rclone 1.42... I'm yet to check if 1.41 which is in debian would suffice but thought that it might be nice to get it updated anyways. Upstream had >100 commits between the two. Unfortunately I did

Bug#902553: new version (2.8.0) is out and heals the annoying warning msg

2018-06-27 Thread Yaroslav Halchenko
Package: python-h5py Version: 2.7.1-2 Severity: normal one of the annoyances of h5py in Debian now is that a bare import leads to $> python -c 'import h5py' /usr/lib/python2.7/dist-packages/h5py/__init__.py:36: FutureWarning: Conversion of the second argument of issubdtype from `float` to

Bug#901377: ping (was: Re: skimage: FTBFS and Debci failure with NumPy 1.14)

2018-06-26 Thread Yaroslav Halchenko
FWIW -- about to upload, cosmetics now On Mon, 25 Jun 2018, Graham Inggs wrote: > On 25 June 2018 at 18:21, Yaroslav Halchenko wrote: > > I am loosely involved and highly interested ;-) If someone could help > > maintaining it, I would appreciate. > > meanwhile sinc

Bug#892949: [Python-modules-team] Bug#892949: mark decorator packages Multi-Arch: foreign

2018-06-25 Thread Yaroslav Halchenko
Sorry for the late follow up -- would you happen to remember why pymvpa2 is listed as effected? AFAIK we do not use python-decorator, thus we do not build- or run depend on it. So why are we affected? On Wed, 14 Mar 2018, Helmut Grohne wrote: > Source: python-decorator > Version: 4.1.2-1 >

Bug#902389: python3-dicom: Please upgrade to 1.1.0

2018-06-25 Thread Yaroslav Halchenko
On Mon, 25 Jun 2018, Torquil Macdonald Sørensen wrote: > Package: python3-dicom > Version: 0.9.9-3 > Severity: wishlist > Hi! > Please upgrade to pydicom 1.1.0. > The following might be automatically solved by upgrading: it might ;-) upstream renamed dicom to pydicom module, so I guess we

Bug#901377: ping (was: Re: skimage: FTBFS and Debci failure with NumPy 1.14)

2018-06-25 Thread Yaroslav Halchenko
On Mon, 25 Jun 2018, Graham Inggs wrote: > On 25 June 2018 at 18:21, Yaroslav Halchenko wrote: > > I am loosely involved and highly interested ;-) If someone could help > > maintaining it, I would appreciate. > > meanwhile since there were no other activity re

Bug#901377: ping (was: Re: skimage: FTBFS and Debci failure with NumPy 1.14)

2018-06-25 Thread Yaroslav Halchenko
On Sat, 23 Jun 2018, Graham Inggs wrote: > Hi Stefan, Yaroslav > On 22 June 2018 at 21:15, Stefan van der Walt wrote: > > That sounds like a good solution to me. That said, scikit-image in > > Debian is now maintained by the science team, so it would be good to > > hear from a member of that

Bug#902376: RM: connectome-workbench [armel armhf] -- ROM; is no longer buildable/usable on armel|armhf

2018-06-25 Thread Yaroslav Halchenko
Package: ftp.debian.org Severity: normal There is no easy way to provide support for those architectures ATM. Should close #902302

Bug#902302: connectome-workbench FTBFS on armel/armhf: error: conflicting declaration 'typedef khronos_ssize_t GLsizeiptr'

2018-06-24 Thread Yaroslav Halchenko
Thank you Adrian Yes, we will proceed the RM way, will deal with it tomorrow Cheers On June 24, 2018 2:30:35 PM EDT, Adrian Bunk wrote: >Source: connectome-workbench >Version: 1.3.1-1 >Severity: serious > >https://buildd.debian.org/status/package.php?p=connectome-workbench=sid > >... >In file

Bug#902258: any docker command triggers an attempt to unlock my GPG key

2018-06-23 Thread Yaroslav Halchenko
Package: docker.io Version: 18.03.1+dfsg1-3 Severity: grave Filing an official report so it doesn't get forgotten (we had some private correspondence about it). New behavior was detected while testing new version in experimental (17.12.1+dfsg-2) and maintains with current one: running any

Bug#901490: RFP: cloudflare-zlib -- compression library - cloudflare optimized version

2018-06-13 Thread Yaroslav Halchenko
Package: wnpp Severity: wishlist * Package name: cloudflare-zlib Version : v1.2.8-28-ge55212b Upstream Author : zlib authors + 9 new contributors * URL : http://github.com/cloudflare/zlib * License : BSD-3 Programming Lang: C Description : compression

Bug#900526: testing of modules which rely on entry points is broken

2018-05-31 Thread Yaroslav Halchenko
Seemed to work like a charm, thank you Piotr! Feel free to close if you think this should be done manually (and not by default) On Thu, 31 May 2018, Piotr Ożarowski wrote: > [Yaroslav Halchenko, 2018-05-31] > > I will meanwhile provide a workaround one way (skipping tests) o

Bug#900526: testing of modules which rely on entry points is broken

2018-05-31 Thread Yaroslav Halchenko
Package: dh-python Version: 3.20180326 Severity: normal My use case is datalad. In upcoming release we will rely on entry points more and our tests verify that entry points could be correctly loaded etc. For the "scripts" we just provided a custom workaround, but now we will use

Bug#739300: [Python-modules-team] Bug#739300: dh_sphinxdoc: Please replace MathJax.js with links to the packaged libjs-mathjax

2018-05-15 Thread Yaroslav Halchenko
severity 739300 normal thanks On Tue, 04 Mar 2014, Sebastian Ramacher wrote: > - lintian emits a privacy-breach-generic because of this [1]. > ... > [1] http://lintian.debian.org/tags/privacy-breach-generic.html lists > some packages that emit the warning for multiple possible MathJax > URLs. I

Bug#895226: FTBFS on amd64 in testing/unstable - a number of tests failures

2018-04-08 Thread Yaroslav Halchenko
Package: python-cffi Version: 1.11.5-1 Severity: serious Justification: fails to build from source (but built successfully in the past) testing/cffi0/test_verify.py ..s [ 35%] [ 39%]

Bug#894526: Taking over scikit-learn into Debian Science team maintenance

2018-04-08 Thread Yaroslav Halchenko
meanwhile may be let me just take care about this tiny issue myself On Sun, 08 Apr 2018, Yaroslav Halchenko wrote: > Ok. Go ahead. Thanks. > But indeed please keep it in a shape so it could be easily backported. > On April 8, 2018 1:59:53 AM EDT, Andreas Tille <andr...@fam-til

Bug#894526: Taking over scikit-learn into Debian Science team maintenance

2018-04-08 Thread Yaroslav Halchenko
Ok. Go ahead. Thanks. But indeed please keep it in a shape so it could be easily backported. On April 8, 2018 1:59:53 AM EDT, Andreas Tille wrote: >Hi Yaroslav and Michael, > >as I did in the past with other scientific packages I would like to >take >over scikit-learn into

Bug#895055: ITP: python-sounddevice -- Python module to play and record sound

2018-04-06 Thread Yaroslav Halchenko
Package: wnpp Severity: wishlist Owner: Yaroslav Halchenko <deb...@onerussian.com> * Package name: python-sounddevice Version : 0.3.10 Upstream Author : Matthias Geier <matthias.ge...@gmail.com> * URL : http://python-sounddevice.readthedocs.io/ * License

Bug#871993: fail2ban.system PartOf is broken causing firewalld to fail

2018-04-03 Thread Yaroslav Halchenko
On Wed, 04 Apr 2018, Sunil Mohan Adapa wrote: > Every system that is using firewalld and fail2ban fails upgrading from > stable to testing (or next stable eventually) because this issue. > Please consider releasing a fix with priority by taking Fedora's > workaround in the posted patch. thanks

Bug#894657: ytdl -i results in AttributeError: 'YtdlPafy' object has no attribute 'encode'

2018-04-02 Thread Yaroslav Halchenko
Package: python3-pafy Version: 0.5.2-2 Severity: normal $> ytdl -i 'https://www.youtube.com/watch?v=Lm4T-ALEIUM' Traceback (most recent call last): File "/usr/bin/ytdl", line 194, in main() File "/usr/bin/ytdl", line 158, in main xprint(vid) File "/usr/bin/ytdl", line 68, in

Bug#887082: confirming that issue is still out there and biting really strong

2018-03-20 Thread Yaroslav Halchenko
On Tue, 20 Mar 2018, Yaroslav Halchenko wrote: > > https://gitlab.gnome.org/GNOME/gnome-shell/merge_requests/4 > Unfortunately that patch isn't directly applicable any longer, so I am at your > mercy to guide me through the darkness: FWIW -- I went back to Xorg from wayland (jus

Bug#887082: confirming that issue is still out there and biting really strong

2018-03-20 Thread Yaroslav Halchenko
On Tue, 20 Mar 2018, Yaroslav Halchenko wrote: > https://gitlab.gnome.org/GNOME/gnome-shell/merge_requests/4 Unfortunately that patch isn't directly applicable any longer, so I am at your mercy to guide me through the darkness: hopa:~/deb/debug/gnome-shell-3.28.0 $> wget

Bug#887082: confirming that issue is still out there and biting really strong

2018-03-20 Thread Yaroslav Halchenko
It might be a separate issue, but since this one was reopened and not yet closed, I just decided to follow up. My laptop decided to reboot this night and I booted into a barely usable desktop -- besides changed behaviors I have massive slowdowns: since every glitch (2 second switching between

Bug#893133: Could we maintain compatibility with older debhelpers to ease backporting

2018-03-16 Thread Yaroslav Halchenko
On Fri, 16 Mar 2018, Afif Elghraoui wrote: > >Thanks for maintaining and updating the package through the latest > >releases. > >But I wondered -- since you also had similar (minor but still) pains -- > >could > >we retain/maintain compatibility with previous versions of debhelper, > >e.g. 10 >

Bug#893133: Could we maintain compatibility with older debhelpers to ease backporting

2018-03-16 Thread Yaroslav Halchenko
Package: singularity-container Version: 2.4.2-4 Severity: wishlist Dear Afif Thanks for maintaining and updating the package through the latest releases. But I wondered -- since you also had similar (minor but still) pains -- could we retain/maintain compatibility with previous versions of

Bug#892472: please refer to nftables

2018-03-10 Thread Yaroslav Halchenko
I guess I have missed up with inability to version recommended packages... Yeah, then we should provide as an alternative. Will do On March 10, 2018 8:10:07 AM EST, Arturo Borrero Gonzalez <art...@debian.org> wrote: >On 10 March 2018 at 14:04, Yaroslav Halchenko <y...@onerussian

Bug#892472: please refer to nftables

2018-03-10 Thread Yaroslav Halchenko
There is no | for recommends afaik On March 10, 2018 7:54:01 AM EST, Arturo Borrero Gonzalez <art...@debian.org> wrote: >On 9 March 2018 at 16:26, Yaroslav Halchenko <y...@debian.org> wrote: >> THANKS! but... >> >> On Fri, 09 Mar 2018, Arturo Borrero Gon

Bug#892472: please refer to nftables

2018-03-09 Thread Yaroslav Halchenko
THANKS! but... On Fri, 09 Mar 2018, Arturo Borrero Gonzalez wrote: > Also, no need to `Recommends: iptables`, since is installed by default in > every > Debian system. indeed it is (triple checked with debootstrap) but it could also as easily be uninstalled. And that is what I guess is

Bug#822766: Python3 binary for pyglet

2018-02-24 Thread Yaroslav Halchenko
On Sat, 24 Feb 2018, Rock Storm wrote: > What's the status of this issue? it is stable. contributions would be welcome(d) > Will it ever be a python3 binary package? yes > I fail to use the package 'python-pyglet' for a python3 application, I > keep getting the following error even though

Bug#890838: duplicate "Example" in a docstring causes FTBFS due to sphinx in dependent package(s)

2018-02-19 Thread Yaroslav Halchenko
Package: python-sympy Version: 1.1.1-3 Severity: important Tags: upstream I am trying to update python-nipy package and it FTBFS due to docs failing to build, because sphinx parses imported interfaces as well and pukes due to https://github.com/numpy/numpydoc/issues/115 since there is two

Bug#887342: please update to pytest >= 3.3.0

2018-02-18 Thread Yaroslav Halchenko
Indeed, new releases are out and since 3.3.0 there is a new fixture (caplog) which an increasing number of projects start to use, so we would need an updated py.test to be able to package them (we run tests at build time) Cheers and thanks in advance -- Yaroslav O. Halchenko Center for Open

Bug#878926: Btrbk (>=0.26.0) bpo needed for users of stretch-backports

2018-02-17 Thread Yaroslav Halchenko
On Sun, 18 Feb 2018, Axel Burri wrote: > > Hi Axel, > > On a somewhat tangentially related topic, please address these two > > lintian errors when you have a chance: > > https://lintian.debian.org/maintainer/a...@tty0.ch.html#btrbk > python-script-but-no-python-dep > The issue here is that

Bug#878926: Btrbk (>=0.26.0) bpo needed for users of stretch-backports

2018-02-07 Thread Yaroslav Halchenko
On Wed, 07 Feb 2018, Nicholas D Steeves wrote: > On Fri, Nov 17, 2017 at 09:50:41AM -0300, Leonhard Weber wrote: > > Hi, > > I'd like to second the request for a bpo release due to the exact same > > rationale. > > In the meantime deferring btrfs bpo upgrades because of btrbk. > :-o > Dear

Bug#866433: impressive: diff for NMU version 0.11.2-1.1

2018-02-03 Thread Yaroslav Halchenko
Feel welcome to upload without delays On February 3, 2018 7:47:15 AM EST, Adrian Bunk wrote: >Control: tags 866433 + patch >Control: tags 866433 + pending > >Dear maintainer, > >I've prepared an NMU for impressive (versioned as 0.11.2-1.1) and >uploaded it to DELAYED/15. Please

Bug#865051: fail2ban: Fails to start after Jessie to Stretch upgrade due to no accessible config files

2018-01-31 Thread Yaroslav Halchenko
On Wed, 31 Jan 2018, Przemysław Pawełczyk wrote: > ERROR Unable to read the filter > ERROR Errors in jail 'ssh-ddos'. Skipping... > It seems that ssh and ssh-ddos were renamed in jail.conf to sshd and > sshd-ddos. > So I had to edit /etc/fail2ban/jail.local to replace [ssh] with [sshd] > and

Bug#880793: closed by Yaroslav Halchenko <deb...@onerussian.com> (Bug#880793: fixed in pymvpa2 2.6.4-1)

2018-01-30 Thread Yaroslav Halchenko
On Tue, 30 Jan 2018, Yaroslav Halchenko wrote: > On Tue, 30 Jan 2018, Adrian Bunk wrote: > > Control: reopen -1 > > On Tue, Jan 30, 2018 at 03:39:04AM +, Debian Bug Tracking System wrote: > > >... > > > pymvpa2 (2.6.4-1) unstable; urgency=medium

Bug#888910: outdated package, outdated homepage

2018-01-30 Thread Yaroslav Halchenko
Package: python-ptrace Version: 0.7-1 Severity: normal Project migrated to github https://github.com/vstinner/python-ptrace and its docs to http://python-ptrace.readthedocs.io/en/latest/ so the homepage in the pkg pointing to http://fusil.hachoir.org/trac/wiki/Ptrace is very outdated Also

Bug#880793: closed by Yaroslav Halchenko <deb...@onerussian.com> (Bug#880793: fixed in pymvpa2 2.6.4-1)

2018-01-30 Thread Yaroslav Halchenko
On Tue, 30 Jan 2018, Yaroslav Halchenko wrote: > On Tue, 30 Jan 2018, Adrian Bunk wrote: > > Control: reopen -1 > > On Tue, Jan 30, 2018 at 03:39:04AM +, Debian Bug Tracking System wrote: > > >... > > > pymvpa2 (2.6.4-1) unstable; urgency=medium

Bug#880793: closed by Yaroslav Halchenko <deb...@onerussian.com> (Bug#880793: fixed in pymvpa2 2.6.4-1)

2018-01-30 Thread Yaroslav Halchenko
On Tue, 30 Jan 2018, Adrian Bunk wrote: > Control: reopen -1 > On Tue, Jan 30, 2018 at 03:39:04AM +, Debian Bug Tracking System wrote: > >... > > pymvpa2 (2.6.4-1) unstable; urgency=medium > >... > >* debian/rules > > - run tests under fixed MVPA_SEED=1 to avoid surprises, so

Bug#888884: segfault for no obvious reason on rcp from remote host

2018-01-30 Thread Yaroslav Halchenko
Package: rsh-client Version: 0.17-15 Severity: important I was truly amazed to find an 11 year old segfault-reporting #366535 but since my traceback/use case is different, decided that it might be a different issue. We use rcp/rsh on our local cluster between nodes. rcp "doesn't work":

Bug#888871: "better" summary and machine readable outputs

2018-01-30 Thread Yaroslav Halchenko
Package: numdiff Version: 5.9.0-1 Severity: wishlist Tags: upstream While using numdiff for comparing across a bulk of results files I came up with some wishes which I have shared with Paolo and we decided to cement them in an official bug report. I was whining about "clutter" in the output

Bug#850753: [docker pkg] please please please, or may be we could help?

2018-01-30 Thread Yaroslav Halchenko
Current docker version in Debian started to "break on me"... Please let us know/guide us if you need help with the update. -- Yaroslav O. Halchenko Center for Open Neuroscience http://centerforopenneuroscience.org Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755 Phone:

Bug#888784: numpy.ctypeslib.load_library looks for incorrect lib suffix on python2

2018-01-29 Thread Yaroslav Halchenko
Package: python-numpy Version: 1:1.13.3-2 Severity: normal I guess it is a rare usecase since I haven't spotted another bugreport, and we have managed to miss it for a while I guess. dh_python2 installs built .so extensions with a arch specific suffix, e.g.: neurodebian@smaug

Bug#888711: fail2ban fails to start sshd-ddos filter.

2018-01-29 Thread Yaroslav Halchenko
guration left from the previous version(s) would either not work or would not work as intended. You are advised to accept new configuration and adjust it for your customizations (if any). -- Yaroslav Halchenko <deb...@onerussian.com> Sun, 21 Jan 2018 22:25

Bug#867550: libgiftiio-dev: This package should have a strong dependance on libnifti-dev

2018-01-25 Thread Yaroslav Halchenko
severity 867550 normal thanks On Fri, 07 Jul 2017, Manonam wrote: > Package: libgiftiio-dev > Version: 1.0.9-1+b2 > Severity: serious > Justification: fails to build from source (but built successfully in the past) Sorry for a delayed reply. As far as I see - it builds fine for me in a clean

Bug#498164: marked as done ([fail2ban] Allow repeated attacker to be blocked for increasingly longer times)

2018-01-24 Thread Yaroslav Halchenko
tags 498164 + fixed-upstream reopen 498164 thanks oops, my bad . As Serge reminded, this will be provided in 0.11 release. So the issue is pending and fixed upstream -- Yaroslav O. Halchenko Center for Open Neuroscience http://centerforopenneuroscience.org Dartmouth College, 419 Moore Hall,

Bug#888110: fail2ban: /etc/fail2ban/action.d/helpers-common.conf has CRLF line terminators

2018-01-23 Thread Yaroslav Halchenko
On Tue, 23 Jan 2018, Vincent Lefevre wrote: > Package: fail2ban > Version: 0.10.2-1 that was quick > Severity: minor > /etc/fail2ban/action.d/helpers-common.conf has CRLF line terminators: > $ file /etc/fail2ban/action.d/helpers-common.conf > /etc/fail2ban/action.d/helpers-common.conf: ASCII

Bug#847728: Fail2ban running shorewall instructions before shorewall is started

2018-01-22 Thread Yaroslav Halchenko
On Mon, 22 Jan 2018, Ben Coleman wrote: > I ran into this on Ubuntu, and it seems the best way to handle this is > via a systemd override. I created a file > /etc/systemd/system/fail2ban.service.d/override.conf with contents: > [Unit] > Requires=shorewall.service > After=shorewall.service >

Bug#866458: Please update Git repository mentioned in VCS fields

2018-01-20 Thread Yaroslav Halchenko
On Sat, 20 Jan 2018, Andreas Tille wrote: > Could you please bring the Git repository in sync to enable me to make > a proper team upload instead of putting the work to inject a NMU into > the repository for something that is so simple that if it would be less > work if you do it yourself.

Bug#881648: outdated - fail2ban 0.10 is available with ipv6 support

2018-01-15 Thread Yaroslav Halchenko
I Will try to do that later this week On January 14, 2018 9:02:03 PM EST, m...@linux.it wrote: >On Nov 13, Christian Kohlstedde wrote: > >> IPv6 usage is growing day by day and so getting fail2ban 0.10 to the >> official debian repositories gets more important, too. I'm

Bug#777089: If there is no response in debian-python then debian-science might be the right team (Was: Packaging python-aws-xray-sdk to fullfil a dependency for python-moto)

2018-01-15 Thread Yaroslav Halchenko
I don't mind helping to maintain it under any of those teams. Thank you Andreas for taking care about this new dependency. I will look into updating pandas package On January 15, 2018 3:37:53 AM EST, Andreas Tille wrote: >Hi again, > >is it correct to assume that Debian

Bug#866446: Where is an up to date Git for openpyxl (Was: What branch of the git repository is featuring the latest packaging)

2018-01-12 Thread Yaroslav Halchenko
On Fri, 12 Jan 2018, Andreas Tille wrote: > On Thu, Jan 11, 2018 at 10:12:52AM -0500, Yaroslav Halchenko wrote: > > BUT I would appreciate if you do ;) > Done and fixed / closed all other bugs. I Upgraded to the latest stable > version by leaving alone beta. Thanks! I

Bug#866446: Where is an up to date Git for openpyxl (Was: What branch of the git repository is featuring the latest packaging)

2018-01-11 Thread Yaroslav Halchenko
Regarding the original report: $> grep python-pil debian/control python-pytest, python-pil | python-imaging, Recommends: python-pytest, python-pil, python-imaging so the only "harm" here is a possible recommends of python-imaging. IMHO severity is exaggerated. Anyways, I will

Bug#886373: ITP: json-tricks -- Python module with extra features for JSON files

2018-01-04 Thread Yaroslav Halchenko
Package: wnpp Severity: wishlist Owner: Yaroslav Halchenko <deb...@onerussian.com> * Package name: json-tricks Version : 3.11.0 Upstream Author : Mark V <markv.nl@gmail.com> * URL : https://github.com/mverleg/pyjson_tricks * License : Revised

Bug#855666: peek debian packaging?

2018-01-04 Thread Yaroslav Halchenko
Hi Paulo Saw https://askubuntu.com/a/833995 so decided to check WNPP and found this ITP. Any progress or should I consider peek'ing into that ppa? -- Yaroslav O. Halchenko Center for Open Neuroscience http://centerforopenneuroscience.org Dartmouth College, 419 Moore Hall, Hinman Box 6207,

Bug#853492: libgdf: ftbfs with GCC-7

2017-12-17 Thread Yaroslav Halchenko
Thanks! On Mon, 18 Dec 2017, Juhani Numminen wrote: > Control: tags -1 + patch > This patch removes -Werror to resolve this FTBFS. Removing the deprecated > exception specifications is another option but I didn't feel like editing > the public headers of the library. -- Yaroslav O. Halchenko

Bug#883466: singularity-container: FTBFS on mips*

2017-12-05 Thread Yaroslav Halchenko
Thanks -- I have submitted them for upstream review/feedback https://github.com/singularityware/singularity/pull/1195 On Mon, 04 Dec 2017, James Cowgill wrote: > Source: singularity-container > Version: 2.4-1 > Severity: serious > Tags: sid buster patch > Hi, > singularity-container FTBFS on

Bug#877344: [Debian-med-packaging] Bug#877344: Bug#877344: python-mne FTBFS: ERROR: Test ICA on raw and epochs

2017-12-04 Thread Yaroslav Halchenko
On Mon, 04 Dec 2017, Alexandre Gramfort wrote: >oh mayavi >I would really be in favor of removing mayavi as a hard dependency. >is it an option? well, it is not a hard dependency already... I just hate when users keep reporting all those and then I need to react. Prefer not to

Bug#877344: [Debian-med-packaging] Bug#877344: python-mne FTBFS: ERROR: Test ICA on raw and epochs

2017-12-04 Thread Yaroslav Halchenko
On Mon, 04 Dec 2017, Alexandre Gramfort wrote: >Hi Andreas, >I don't have the bandwidth to address this sorry. >Also mne 0.13 is now 2 versions behind where we are now. >Nobody found the time to do the debian packaging for 0.14 >and 0.15 so far. >Really sorry about this.

Bug#877344: [Debian-med-packaging] Bug#877344: python-mne FTBFS: ERROR: Test ICA on raw and epochs

2017-12-04 Thread Yaroslav Halchenko
I will look into updating it in upcoming days On December 4, 2017 8:54:28 AM EST, Alexandre Gramfort wrote: >Hi Andreas, > >I don't have the bandwidth to address this sorry. > >Also mne 0.13 is now 2 versions behind where we are now. >Nobody found the time to do the

Bug#873075: I would cheer up too

2017-11-13 Thread Yaroslav Halchenko
if there was a new release packaged so we could test it well before the next stable Debian release. Thank you very much for packaging and maintaining backuppc -- Yaroslav O. Halchenko Center for Open Neuroscience http://centerforopenneuroscience.org Dartmouth College, 419 Moore Hall,

Bug#880234: Re%3A nibabel%3A FTBFS%3A Test failures

2017-11-07 Thread Yaroslav Halchenko
Thanks for checking it out! I will issue an updated package shortly Cheers and thnks again On Tue, 07 Nov 2017, Thiago Franco de Moraes wrote: > Hi > I cloned the git repo from nibabel and did some tests. I saw the HEAD of > upstream doesn't have this problem. The difference from the HEAD to

Bug#878930: psychopy: Please update to 1.85.4

2017-10-17 Thread Yaroslav Halchenko
On Tue, 17 Oct 2017, Jeremy Bicha wrote: > Source: psychopy > Version: 1.85.3.dfsg-1 > According to http://www.psychopy.org/changelog.html > the 1.85.3 release was incorrectly generated. You likely want 1.85.4 instead. oh... thanks Jeremy... I will try to fix it up soonish for 1.85.4 I had to

Bug#877419: [Help] Exclusion did not worked (Was: Bug#877419: Bug#877700: RM: pandas [arm64 armel armhf mips mips64el mipsel s390x] ...)

2017-10-14 Thread Yaroslav Halchenko
On Sat, 14 Oct 2017, Ghislain Vaillant wrote: > On 14/10/17 07:54, Andreas Tille wrote: > > On Fri, Oct 13, 2017 at 08:00:36PM +0200, Andreas Tille wrote: > > ... > > pandas_datareader: None > > usage: pytest.py [options] [file_or_dir] [file_or_dir] [...] > > pytest.py: error: unrecognized

Bug#877419: Bug#877700: RM: pandas [arm64 armel armhf mips mips64el mipsel s390x] -- ROM; Some build time tests are failing on specific architectures

2017-10-13 Thread Yaroslav Halchenko
On Fri, 13 Oct 2017, Andreas Tille wrote: >1. proceed as I suggested here: > https://lists.debian.org/debian-science/2017/10/msg1.html >... > Is there anybody who is no happy about this? sorry to be the pain, I am ... And first of all -- thanks for taking care about pandas! I

Bug#868582: skimage (was: Re: Bug#729956: Python 3 Statsmodels & Pandas)

2017-10-10 Thread Yaroslav Halchenko
On Tue, 10 Oct 2017, Yuri D'Elia wrote: > On Sat, Sep 16 2017, Yuri D'Elia wrote: > > Looking at python3-skimage-lib (which also requires a rebuild), it seems > > that the package failed to pass some tests. > > Bug #868582 even includes a patch to update to 0.13 [and disables some > > test

Bug#875797: fixed up pkging is available from http://github.com/yarikoptic/wrapt

2017-09-18 Thread Yaroslav Halchenko
On Thu, 14 Sep 2017, Yaroslav Halchenko wrote: > On Thu, 14 Sep 2017, Yaroslav Halchenko wrote: > > I pushed branch debian/pike with all needed changes to my "fork" of > > upstream (since you package on top of it) to > > http://github.com/yarikoptic/wra

Bug#875797: fixed up pkging is available from http://github.com/yarikoptic/wrapt

2017-09-14 Thread Yaroslav Halchenko
I pushed branch debian/pike with all needed changes to my "fork" of upstream (since you package on top of it) to http://github.com/yarikoptic/wrapt Please consider adopting ;) Trying to build now -- Yaroslav O. Halchenko Center for Open Neuroscience http://centerforopenneuroscience.org

Bug#875797: fixed up pkging is available from http://github.com/yarikoptic/wrapt

2017-09-14 Thread Yaroslav Halchenko
On Thu, 14 Sep 2017, Yaroslav Halchenko wrote: > I pushed branch debian/pike with all needed changes to my "fork" of > upstream (since you package on top of it) to > http://github.com/yarikoptic/wrapt > Please consider adopting ;) > Trying to build now may be no

Bug#875799: debian/watch is not usable

2017-09-14 Thread Yaroslav Halchenko
2.7.13-2 ii python-six 1.10.0-3 pn python:any python-wrapt recommends no packages. python-wrapt suggests no packages. -- no debconf information >From 571f5a2b7ba75291bc8d8268d96a7a7dc0d2eb04 Mon Sep 17 00:00:00 2001 From: Yaroslav Halchenko <deb...@onerussian.com> Date: Thu, 14 Sep 2

Bug#875798: vcs url is wrong

2017-09-14 Thread Yaroslav Halchenko
Package: python-wrapt Version: 1.9.0-2 Severity: normal $> debcheckout python-wrapt declared git repository at https://anonscm.debian.org/git/openstack/python-wrapt.git git clone https://anonscm.debian.org/git/openstack/python-wrapt.git python-wrapt ... Cloning into 'python-wrapt'... fatal:

Bug#875797: need 1.10.11 to workaround segfault due to wrapt

2017-09-14 Thread Yaroslav Halchenko
Package: python-wrapt Version: 1.9.0-2 Severity: important Tags: upstream Dear wrapt maintainers, In our datalad project we ran into a quite nasty issue causing segfaults: https://github.com/GrahamDumpleton/wrapt/issues/98 which now prevents tests to pass for the upcoming new release of

Bug#872277: patched version needed to avoid fatal: Out of memory, getdelim failed crash

2017-08-16 Thread Yaroslav Halchenko
Hi Jonathan -- thank you very much for looking into it > > Subject: patched version needed to avoid fatal: Out of memory, getdelim > > failed crash > You could say that about all bugs. A patched version is needed to fix > the bug. :) ;) indeed... should have said "attached patch is needed to

Bug#868977: statsmodels is marked for autoremoval from testing

2017-08-16 Thread Yaroslav Halchenko
On August 16, 2017 8:11:50 PM EDT, Andreas Tille wrote: >Hi Yaroslav, > >> apparently it is a problem in recent pandas, which isn't yet resolved >or >> worked around in statsmodels >> >https://github.com/statsmodels/statsmodels/issues/3841#issuecomment-318630239 >> so we might

Bug#872277: patched version needed to avoid fatal: Out of memory, getdelim failed crash

2017-08-15 Thread Yaroslav Halchenko
the file and if it encounters an error, but sets errno only in the latter case. Set errno to zero before calling it to avoid misdiagnosing an out-of-memory condition due to a left-over value from some other function call. Reported-by: Yaroslav Halchenko <y...@onerussian.com> Suggested-by: Junio C Hamano <

Bug#847728: fail2ban: Fail2ban running shorewall instructions before shorewall is started

2017-08-09 Thread Yaroslav Halchenko
On Tue, 08 Aug 2017, Graham Bosworth wrote: >### Note that this is from Gentoo, rather than Debian yeah >On a Pentium at 200MHz, wow!!! do you have a physical beast like that from 90s? > it seems that it can indeed terminateprematurely. any chance you could also try 0.9.7

Bug#871371: singularity-container: FTBFS: help2man: can't get `--version' info from /tmp/tmp.YU5T8oOc4W/run-singularity

2017-08-07 Thread Yaroslav Halchenko
On Mon, 07 Aug 2017, Lucas Nussbaum wrote: > Hi, > On 07/08/17 at 14:32 -0400, Yaroslav Halchenko wrote: > > severity 871371 important > > tags 871371 + unreproducible > > thanks > > Ran rebuild which succeeded just fine on up to date sid for both amd64 > &g

Bug#871371: singularity-container: FTBFS: help2man: can't get `--version' info from /tmp/tmp.YU5T8oOc4W/run-singularity

2017-08-07 Thread Yaroslav Halchenko
severity 871371 important tags 871371 + unreproducible thanks Ran rebuild which succeeded just fine on up to date sid for both amd64 and i386 (binary only) Would need to be able to reproduce to figure out WTF On Mon, 07 Aug 2017, Lucas Nussbaum wrote: > Source: singularity-container > Version:

Bug#870651: fail2ban: systemd-journald support broken

2017-08-03 Thread Yaroslav Halchenko
Oh, we definitely should update Sid version of fail2ban. Thanks for the buzz, will do later today Cheers -- Sent from a phone which beats iPhone.

Bug#868977: Confirm that I'm able to verify the problem

2017-07-28 Thread Yaroslav Halchenko
On Thu, 27 Jul 2017, Andreas Tille wrote: > > would need to dig in, may be later, meanwhile pushed my slight tune ups, > > feel > > welcome to fix up. You do know where to get the .orig.tar.gz ;) > Sure I know and I used it for building. What about simplifying things > for your team mates

Bug#868977: Confirm that I'm able to verify the problem

2017-07-27 Thread Yaroslav Halchenko
On Thu, 27 Jul 2017, Andreas Tille wrote: > Hi, > I was hoping that taking over the version from experimental to unstable > might help to fix this bug but I can only confirm that I can reproduce eh -- plain rebuild doesn't suffice -- tests still fail and some new failures happen:

Bug#868977: Confirm that I'm able to verify the problem

2017-07-27 Thread Yaroslav Halchenko
On Thu, 27 Jul 2017, Yaroslav Halchenko wrote: > Is there any demand/requirement for debhelper 10 for this package? > Could we settle on 9 (to ease backportability to old jessie and alike)? I would guess that the answers are no and yes, fixed up, building now, will upload whenever done

Bug#868977: Confirm that I'm able to verify the problem

2017-07-27 Thread Yaroslav Halchenko
On July 27, 2017 9:23:16 AM EDT, Andreas Tille wrote: >Hi, > >I was hoping that taking over the version from experimental to unstable >might help to fix this bug but I can only confirm that I can reproduce >the problem here. So it also happens for version 0.8.0. I've

Bug#868977: Confirm that I'm able to verify the problem

2017-07-27 Thread Yaroslav Halchenko
On Thu, 27 Jul 2017, Andreas Tille wrote: > Hi, > I was hoping that taking over the version from experimental to unstable > might help to fix this bug but I can only confirm that I can reproduce > the problem here. So it also happens for version 0.8.0. I've commited > my attempt to Git and

Bug#869189: ITP: git-annex-remote-rclone -- rclone-based git annex special remote

2017-07-21 Thread Yaroslav Halchenko
Package: wnpp Severity: wishlist Owner: Yaroslav Halchenko <deb...@onerussian.com> * Package name: git-annex-remote-rclone Version : 0.5 Upstream Author : Daniel Dent <sourcec...@contactdaniel.net> * URL : https://github.com/DanielDent/git-annex-remote-rclo

Bug#851725: seems to FTBFS quite reliably for me on recent debians

2017-07-19 Thread Yaroslav Halchenko
tried on local laptop -- FTBFS, and then in clean sid/testing built fine on debian stable (stretch) and ubuntu 17.04 -- Yaroslav O. Halchenko Center for Open Neuroscience http://centerforopenneuroscience.org Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755 Phone: +1

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