Bug#797793: samtools update seems to breaks even more tests

Hi, other uploaders of pysam in CC: When building htseq with current pysam in unstable I get: ... All 26 tests passed. Doctest of tss.rst: ** File "../doc/tss.rst", line 211, in tss.rst Failed example: for almnt in

Bug#788708: Bug#799632: iceweasel: SIGSEGV when playing videos via gstreamer

On Sa, 2015-12-05 at 16:28 +0100, Soeren D. Schulze wrote: > Am 12.11.2015 um 15:02 schrieb Sebastian Dröge: > > On Do, 2015-11-12 at 14:41 +0100, Soeren D. Schulze wrote: > > > Hello, > > > > > > the problem does not seem to occur any more with > > > gstreamer1.0-plugins-bad 1.6.1-1+b1 and

Bug#798167: camitk: depends on vtk 5

Hi Emmanuel and Nicolas, I hope you realised the bug reported in Debian saying: > your package depends on vtk 5.x, which should not be in stretch. Please > switch to vtk 6.x or drop the dependency. It would be great if you could adapt camitk and release a new version. Kind regards

Bug#807114: marked as done (python-acme: needs python-openssl >= 0.15, but dependency is unversioned)

Your message dated Sun, 06 Dec 2015 05:56:22 + with message-id and subject line Bug#807114: fixed in python-acme 0.1.0-2 has caused the Debian Bug report #807114, regarding python-acme: needs python-openssl >= 0.15, but dependency is unversioned to be

Bug#706928: marked as done (zemberek-server doesn't respect to the Java paths of the system)

Your message dated Sat, 05 Dec 2015 12:57:48 + with message-id and subject line Bug#706928: fixed in zemberek-server 0.7.1-12.2 has caused the Debian Bug report #706928, regarding zemberek-server doesn't respect to the Java paths of the system to be marked

Bug#761646: marked as done (zemberek-server: missing dependency on dbus)

Your message dated Sat, 05 Dec 2015 12:57:48 + with message-id and subject line Bug#761646: fixed in zemberek-server 0.7.1-12.2 has caused the Debian Bug report #761646, regarding zemberek-server: missing dependency on dbus to be marked as done. This

Bug#807114: python-acme: needs python-openssl >= 0.15, but dependency is unversioned

Source: python-acme Version: 0.1.0-1 Severity: serious python-acme needs at least version 0.15 of python-openssl. This is reflected in the Build-Depends, but the binary packages have an unversioned dependency on python-openssl. Trying to use the letsencrypt client with older versions of

Bug#797738: marked as done (gdcm: ABI transition needed for libstdc++ v5)

Your message dated Sat, 05 Dec 2015 14:01:48 + with message-id and subject line Bug#797738: fixed in gdcm 2.6.0+dfsg-1 has caused the Debian Bug report #797738, regarding gdcm: ABI transition needed for libstdc++ v5 to be marked as done. This means that

Bug#807113: golang-golang-x-net-dev and golang-golang-x-crypto-dev: error when trying to install together

Package: golang-golang-x-crypto-dev,golang-golang-x-net-dev Version: golang-golang-x-crypto-dev/1:0.0~git20151201.0.7b85b09-2 Version: golang-golang-x-net-dev'0.0+git20151007.b846920+dfsg-1@all, golang-golang-x-net-dev/1:0.0~git20151201.0.7b85b09-1 Severity: serious User: trei...@debian.org

Bug#788708: Bug#799632: iceweasel: SIGSEGV when playing videos via gstreamer

Am 12.11.2015 um 15:02 schrieb Sebastian Dröge: On Do, 2015-11-12 at 14:41 +0100, Soeren D. Schulze wrote: Hello, the problem does not seem to occur any more with gstreamer1.0-plugins-bad 1.6.1-1+b1 and iceweasel 38.4.0esr-1. Do you have any specific packages for me to test? Just a normal

Bug#807091: [Pkg-xfce-devel] Bug#807091: xfce4-terminal fails to start with an error message

control: severity -1 important control: tag -1 unreproducible moreinfo On sam., 2015-12-05 at 11:04 +0100, Thomas Weber wrote: > Package: xfce4-terminal > Version: 0.6.3-2 > Severity: grave > Justification: renders package unusable > > Launching xfce4-terminal as normal user gives the following

Processed: Re: [Pkg-xfce-devel] Bug#807091: xfce4-terminal fails to start with an error message

Processing control commands: > severity -1 important Bug #807091 [xfce4-terminal] xfce4-terminal fails to start with an error message Severity set to 'important' from 'grave' > tag -1 unreproducible moreinfo Bug #807091 [xfce4-terminal] xfce4-terminal fails to start with an error message Added

Bug#801228: marked as done (libopenjp2-7-dev should conflict with src:gdcm)

Your message dated Sat, 05 Dec 2015 14:01:48 + with message-id and subject line Bug#801228: fixed in gdcm 2.6.0+dfsg-1 has caused the Debian Bug report #801228, regarding libopenjp2-7-dev should conflict with src:gdcm to be marked as done. This means that

Bug#797673: marked as done (Switch back to SWIB based C# layer in GDCM)

Your message dated Sat, 05 Dec 2015 14:01:48 + with message-id and subject line Bug#797673: fixed in gdcm 2.6.0+dfsg-1 has caused the Debian Bug report #797673, regarding Switch back to SWIB based C# layer in GDCM to be marked as done. This means that you

Bug#806243: [libminc] Test issues when building on mipsel architecture (#66)

Hi, I'm just forwarding this mail from upstream. From my perspective it is possibly not a bug in libminc but rather a problem of certain mips hardware. I wonder in how far this is a serious bug of libminc and should be downgraded to important (at maximum). Kind regards Andreas. On

Bug#802356: Any news about this bug?

Am 05.12.2015 um 18:12 schrieb Andreas Tille: > Hi, > > I just noticed that the reverse depends of this package are removed from > testing. As you know I tried to help in resolving this bug but I was > running out of ideas and contacting upstream was also not helpful. > > Any news about this? >

Bug#807128: gcc-5-base: Differing changelog.Debian.gz between :i386 and :amd64

no binNMU please. On 05.12.2015 19:25, James McCoy wrote: Control: reassign -1 release.debian.org Control: retitle -1 nmu: gcc-5_5.3.0-3 Control: user release.debian@packages.debian.org Control: usertag -1 binnmu nmu gcc-5_5.3.0-3 . amd64 . unstable . -m "Rebuild to fix M-A installability"

Bug#806243: libminc: FTBFS on mipsel

Hi Jurica, On Fri, Dec 04, 2015 at 08:25:09PM +, Jurica Stanojkovic wrote: > I have tried to build package libminc_2.3.00-2 for mipsel and mips64el on > diferent build boards: netlogic-xlp, cavium and loongson-3a. > This package FTBFS only on loongson-3a (lemote). > On other build machines

Bug#775118: [PATCH] Fix postinst

Hi, can we get a fixed version into at least experimental please? The bug is already open since agx. I'm also happy to NMU. Cheers, -- Guido

Bug#806243: libminc: FTBFS on mipsel

Hi, [Adding minc-development as follow-up to previous email; http://www.bic.mni.mcgill.ca/pipermail/minc-development/2015-November/001223.html ] On December 4, 2015 08:25:09 PM Jurica Stanojkovic wrote: > User: debian-m...@lists.debian.org > > Hello, > > I have tried to build package

Bug#806243: [MINC-development] Bug#806243: libminc: FTBFS on mipsel

Steve et al, I used an emulated mipsel environment using some other distributions (found here: https://people.debian.org/~aurel32/qemu/mipsel/) - the bug was not reproducible. I am in the process of building a QEMU environment for a more recent release ("sid" from 20151023), I will try that as

Bug#807113: marked as done (golang-golang-x-net-dev and golang-golang-x-crypto-dev: error when trying to install together)

Your message dated Sat, 5 Dec 2015 09:52:56 -0800 with message-id and subject line Fwd: golang-golang-x-net-dev_0.0+git20150817.66f0418-1_source.changes ACCEPTED into unstable has caused the Debian Bug report #807113,

Processed: fixed 806930 in 2015.11.22-1

Processing commands for cont...@bugs.debian.org: > fixed 806930 2015.11.22-1 Bug #806930 [pianobar] pianobar needs update for new server SSL certificate Marked as fixed in versions pianobar/2015.11.22-1. > thanks Stopping processing here. Please contact me if you need assistance. -- 806930:

Bug#807086: perl/experimental: FTBFS: cpan/podlators/t/devise-date failure

Niko Tyni writes: > Turns out the backported SOURCE_DATE_EPOCH support from podlators-4.00 > doesn't itself survive being build with SOURCE_DATE_EPOCH (or > POD_MAN_DATE, for that matter) set. Patch attached. Doh. Thanks. :) I'll kick out a new version, probably this

Processed: found 806930 in 2014.06.08-1

Processing commands for cont...@bugs.debian.org: > found 806930 2014.06.08-1 Bug #806930 [pianobar] pianobar needs update for new server SSL certificate Marked as found in versions pianobar/2014.06.08-1. > thanks Stopping processing here. Please contact me if you need assistance. -- 806930:

Processed: found 806930 in 2012.05.06-2

Processing commands for cont...@bugs.debian.org: > found 806930 2012.05.06-2 Bug #806930 [pianobar] pianobar needs update for new server SSL certificate Marked as found in versions pianobar/2012.05.06-2. > thanks Stopping processing here. Please contact me if you need assistance. -- 806930:

Bug#802356: Any news about this bug?

Hi, I just noticed that the reverse depends of this package are removed from testing. As you know I tried to help in resolving this bug but I was running out of ideas and contacting upstream was also not helpful. Any news about this? Kind regards Andreas. -- http://fam-tille.de

Bug#807113: [pkg-go] Bug#807113: golang-golang-x-net-dev and golang-golang-x-crypto-dev: error when trying to install together

On 5 December 2015 at 05:45, Ralf Treinen wrote: > automatic installation tests of packages that share a file and at the > same time do not conflict by their package dependency relationships has > detected the following problem: This whole mess was my fault. :( (See #807002 for

Bug#807128: gcc-5-base: Differing changelog.Debian.gz between :i386 and :amd64

Package: gcc-5-base Version: 5.3.0-3 Severity: serious Unpacking gcc-5-base:amd64 (5.3.0-3) over (5.2.1-27) ... Preparing to unpack .../gcc-5-base_5.3.0-3_i386.deb ... Unpacking gcc-5-base:i386 (5.3.0-3) over (5.2.1-27) ... dpkg: error processing archive

Bug#807128: gcc-5-base: Differing changelog.Debian.gz between :i386 and :amd64

Control: reassign -1 release.debian.org Control: retitle -1 nmu: gcc-5_5.3.0-3 Control: user release.debian@packages.debian.org Control: usertag -1 binnmu nmu gcc-5_5.3.0-3 . amd64 . unstable . -m "Rebuild to fix M-A installability" On Sat, Dec 05, 2015 at 01:00:20PM -0500, James McCoy

Processed (with 2 errors): Re: Bug#807128: gcc-5-base: Differing changelog.Debian.gz between :i386 and :amd64

Processing control commands: > reassign -1 release.debian.org Bug #807128 [gcc-5-base] gcc-5-base: Differing changelog.Debian.gz between :i386 and :amd64 Bug reassigned from package 'gcc-5-base' to 'release.debian.org'. No longer marked as found in versions gcc-5/5.3.0-3. Ignoring request to

Bug#807038: marked as done (perl/experimental: FTBFS on powerpc: t/op/sprintf2.t failure)

Your message dated Sat, 05 Dec 2015 10:23:10 + with message-id and subject line Bug#807038: fixed in perl 5.22.1~rc3-2 has caused the Debian Bug report #807038, regarding perl/experimental: FTBFS on powerpc: t/op/sprintf2.t failure to be marked as done.

Bug#807097: python-django: Undeclared removal of previously supported features causes crashes

Package: python-django Version: 1.9-1 Severity: grave Justification: renders package unusable http://paste.debian.net/341382/ http://paste.debian.net/341383/ I had previously tested django1.9 from experimental and have prepared changes which allow lava-server to run and for all the unit tests

Bug#807097: testing is fine, as *was* experimental.

Downgrading to testing fixes both the server import error and the unit test import error. Neither of these issues were seen with the version of 1.9 that was actually in experimental. -- Neil Williams = http://www.linux.codehelp.co.uk/ pgpMEYlQysxlW.pgp Description: OpenPGP

Bug#802461: marked as done (dolphin4: fails to upgrade from 'jessie' - trying to overwrite /usr/lib/kde4/dolphinpart.so)

Your message dated Sat, 05 Dec 2015 11:22:03 + with message-id and subject line Bug#802461: fixed in kde-baseapps 4:15.08.3-1 has caused the Debian Bug report #802461, regarding dolphin4: fails to upgrade from 'jessie' - trying to overwrite

Processed: reassign 807015 to xserver-xorg-core

Processing commands for cont...@bugs.debian.org: > reassign 807015 xserver-xorg-core 2:1.17.2-2 Bug #807015 [xinit] xinit: startx freezes, mouse and keyboard don't work Bug reassigned from package 'xinit' to 'xserver-xorg-core'. No longer marked as found in versions xinit/1.3.4-3. Ignoring

Bug#807086: marked as done (perl/experimental: FTBFS: cpan/podlators/t/devise-date failure)

Your message dated Sat, 05 Dec 2015 10:23:10 + with message-id and subject line Bug#807086: fixed in perl 5.22.1~rc3-2 has caused the Debian Bug report #807086, regarding perl/experimental: FTBFS: cpan/podlators/t/devise-date failure to be marked as done.

Bug#807015: xinit: startx freezes, mouse and keyboard don't work

On Sat, 5 Dec 2015 07:55:54 +1100 Craig Sanders wrote: > On Fri, Dec 04, 2015 at 01:57:53PM +0100, Laurent Bigonville wrote: > > Are you using systemd? > > Nope, this particular machine is still sysvinit. > > It also has over 20 years worth of cruft on it, as i first built it in

Bug#806243: [libminc] Test issues when building on mipsel architecture (#66)

On Sat, 2015-12-05 at 18:21 +0100, Andreas Tille wrote: > Hi, > > I'm just forwarding this mail from upstream.  From my perspective it is > possibly not a bug in libminc but rather a problem of certain mips > hardware.  I haven't looked at this build failure in particular, but I do know the FPUs

Bug#807128: gcc-5-base: Differing changelog.Debian.gz between :i386 and :amd64

On 05/12/2015 20:37, Matthias Klose wrote: > no binNMU please. > > On 05.12.2015 19:25, James McCoy wrote: >> Control: reassign -1 release.debian.org >> Control: retitle -1 nmu: gcc-5_5.3.0-3 >> Control: user release.debian@packages.debian.org >> Control: usertag -1 binnmu >> >> nmu

Bug#804586: marked as done (qtiplot: FTBFS: Error: pdflatex compilation failed)

Your message dated Sat, 05 Dec 2015 23:43:51 + with message-id and subject line Bug#804586: fixed in qtiplot 0.9.8.9-11 has caused the Debian Bug report #804586, regarding qtiplot: FTBFS: Error: pdflatex compilation failed to be marked as done. This means

Bug#807128: gcc-5-base: Differing changelog.Debian.gz between :i386 and :amd64

On Sat, Dec 05, 2015 at 08:37:15PM +0100, Matthias Klose wrote: > no binNMU please. Why? Are you planning to do a sourceful upload? If not, that would resolve the installability issues that people are going to encounter. Cheers, -- James GPG Key: 4096R/331BA3DB 2011-12-05 James McCoy

Processed: affects 807128

Processing commands for cont...@bugs.debian.org: > affects 807128 gcc-5-base libgcc1 Bug #807128 [release.debian.org] nmu: gcc-5_5.3.0-3 Added indication that 807128 affects gcc-5-base and libgcc1 > thanks Stopping processing here. Please contact me if you need assistance. -- 807128:

Bug#802671: marked as done (CVE-2015-7940: bouncycastle: ECC private keys can be recovered via invalid curve attack)

Your message dated Sun, 06 Dec 2015 01:19:15 + with message-id and subject line Bug#802671: fixed in bouncycastle 1.51-2 has caused the Debian Bug report #802671, regarding CVE-2015-7940: bouncycastle: ECC private keys can be recovered via invalid curve

Bug#795141: marked as done (zeitgeist-explorer: FTBFS: invalid dates in changelog)

Your message dated Sun, 06 Dec 2015 01:23:47 + with message-id and subject line Bug#795141: fixed in zeitgeist-explorer 0.2-1.1 has caused the Debian Bug report #795141, regarding zeitgeist-explorer: FTBFS: invalid dates in changelog to be marked as done.

Bug#806769: marked as done (FTBS: failed test on mipsel architecture: random Bus error emitted from GOMP)

Your message dated Sun, 06 Dec 2015 01:22:55 + with message-id and subject line Bug#806769: fixed in normaliz 3.0.0+ds-3 has caused the Debian Bug report #806769, regarding FTBS: failed test on mipsel architecture: random Bus error emitted from GOMP to be

Bug#805565: [Pkg-utopia-maintainers] Bug#805565: network-manager: ppp new upstream release; dh_ppp

On 2015-12-04 23:38, Michael Biebl wrote: > Hi > > Am 04.12.2015 um 10:06 schrieb Chris Boot: >> Control: severity serious >> >> Hi Michael, >> >> I have now uploaded ppp 2.4.7-1+1 to unstable, therefore the ppp plugin >> this package ships is now broken in sid. Please upload a patched version >>

Bug#807091: xfce4-terminal fails to start with an error message

Package: xfce4-terminal Version: 0.6.3-2 Severity: grave Justification: renders package unusable Launching xfce4-terminal as normal user gives the following error message in an error window: "Failed to execute child grantpt failed: Operation not permitted" After closing the error message, the

Processed: tagging 807038

Processing commands for cont...@bugs.debian.org: > tags 807038 + patch fixed-upstream Bug #807038 [perl] perl/experimental: FTBFS on powerpc: t/op/sprintf2.t failure Added tag(s) fixed-upstream and patch. > thanks Stopping processing here. Please contact me if you need assistance. -- 807038:

Bug#807038: Perl 5.22.1-RC3 is now available!

On Fri, Dec 04, 2015 at 02:08:01PM -0600, Craig A. Berry wrote: > On Fri, Dec 4, 2015 at 12:24 PM, Niko Tyni wrote: > > doublekind='4'; looks like those tests get run only on linux > > with that doublekind. > > Right. I hadn't noticed the linux-only part before. These tests

Bug#807080: marked as done (libraw1394: Please drop obsolete MAKEDEV call)

Your message dated Sat, 05 Dec 2015 09:37:28 + with message-id and subject line Bug#807080: fixed in libraw1394 2.1.1-2 has caused the Debian Bug report #807080, regarding libraw1394: Please drop obsolete MAKEDEV call to be marked as done. This means that

Bug#807086: perl/experimental: FTBFS: cpan/podlators/t/devise-date failure

Package: perl Version: 5.22.1~rc3-1 Severity: serious Tags: upstream patch X-Debbugs-Cc: Russ Allbery This package failed to build on ppc64el and mips64el: cpan/podlators/t/devise-date .. # Failed test 'devise_date matches strftime' # at

Bug#805565: marked as done (network-manager: ppp new upstream release; dh_ppp)

Your message dated Sat, 05 Dec 2015 22:52:22 + with message-id and subject line Bug#805565: fixed in network-manager 1.0.8-2 has caused the Debian Bug report #805565, regarding network-manager: ppp new upstream release; dh_ppp to be marked as done. This

Bug#805566: marked as done (network-manager-pptp: ppp new upstream release; dh_ppp)

Your message dated Sat, 05 Dec 2015 22:52:27 + with message-id and subject line Bug#805566: fixed in network-manager-pptp 1.0.8-2 has caused the Debian Bug report #805566, regarding network-manager-pptp: ppp new upstream release; dh_ppp to be marked as

Processed: gramps: FTBFS - fix is pending

Processing control commands: > tags -1 pending Bug #805202 [src:gramps] gramps: FTBFS: test_regular_date_parsed_dmy: Failure: ImproperlyConfigured Added tag(s) pending. -- 805202: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=805202 Debian Bug Tracking System Contact ow...@bugs.debian.org

Bug#805202: gramps: FTBFS - fix is pending

Control: tags -1 pending Hi, I was expecting this issue as I had a preview of a similar failure in Ubuntu when Python 3.5 is the default. I had been waiting for Django 1.8, and now we have Django 1.9 and the failure still exists. As the Django webapp in Gramps is not yet enabled (not used),

Bug#807097: python-django: Undeclared removal of previously supported features causes crashes

On Sat, 05 Dec 2015, Neil Williams wrote: > http://paste.debian.net/341382/ So this one is fairly obvious, I already replied that it's django.template.base.Origin that you should have used in the first place since where the code actually is... relying on the fact that it was also imported in

Bug#755632: [Python-modules-team] Bug#807101: python-django-voting: Too loose dependency on python-django

Valentin Lorentz writes: > python-django-voting 0.2-1 (the current version in Sid) is not > compatible with python-django 1.9-1 (the current version in Sid), but > the dependency specification does not mention this incompatibility: it > only requires: “python-django (>=

Bug#807097: [Python-modules-team] Bug#807097: python-django: Undeclared removal of previously supported features causes crashes

Raphael Hertzog writes: > This one is actually documented, add_to_builtins has never been a public > API. > > https://docs.djangoproject.com/en/1.9/releases/1.9/#django-template-base-add-to-builtins-is-removed I thought this was removed in Django 1.8 - I remember as it

Processed: fix severity

Processing commands for cont...@bugs.debian.org: > severity 805746 serious Bug #805746 [src:aghermann] aghermann: Fails to build with GSL 2 Severity set to 'serious' from 'important' > thanks Stopping processing here. Please contact me if you need assistance. -- 805746: