Re: Request for sponsoring: beagle

2016-03-26 Thread Afif Elghraoui
على السبت 26 آذار 2016 ‫14:01، كتب Andreas Tille: >> Uploaded - thanks for your work. Andreas. > And probably beaten. ;-) Thanks a lot Afif! > No problem! I do, however, think it's time something is done abou the race conditions. I have a suggestion that I'm going to post to the thread

Re: Request for sponsoring: beagle

2016-03-26 Thread Andreas Tille
On Sat, Mar 26, 2016 at 09:59:09PM +0100, Andreas Tille wrote: > Uploaded - thanks for your work. Andreas. And probably beaten. ;-) Thanks a lot Afif! > On Sat, Mar 26, 2016 at 07:55:07PM +0100, Dylan wrote: > > Hi all, > > Could someone sponsor this new package [1] ? > > > > Package name:

Re: Request for sponsoring: beagle

2016-03-26 Thread Andreas Tille
Uploaded - thanks for your work. Andreas. On Sat, Mar 26, 2016 at 07:55:07PM +0100, Dylan wrote: > Hi all, > Could someone sponsor this new package [1] ? > > Package name: beagle > URL: https://faculty.washington.edu/browning/beagle/beagle.html > License: GPL3+ > Programming Lang: Java >

Re: Request for sponsoring: beagle

2016-03-26 Thread Afif Elghraoui
Hi, Dylan, على السبت 26 آذار 2016 ‫11:55، كتب Dylan: > Hi all, > Could someone sponsor this new package [1] ? > Done. > Package name: beagle > URL: https://faculty.washington.edu/browning/beagle/beagle.html > License: GPL3+ > Programming Lang: Java > Description: Genotypic imputation that works

Re: Artemis: fix for #808851

2016-03-26 Thread Afif Elghraoui
Hi, Sascha, على السبت 26 آذار 2016 ‫12:37، كتب Sascha Steinbiss: >> That's strange. It works for me on jessie. I will take a look, but it >> seems as though you don't have jarwrapper installed (but javahelper >> should have added it as a dependency of artemis). > > I actually do have it

Re: Artemis: fix for #808851

2016-03-26 Thread Sascha Steinbiss
Hi Afif, >> Did I miss something? I have everything to run Artemis (‘java -jar >> /usr/bin/art’ indeed runs Artemis) but the jar wrapper part doesn’t seem to >> work for me. >> > > That's strange. It works for me on jessie. I will take a look, but it > seems as though you don't have

Request for sponsoring: beagle

2016-03-26 Thread Dylan
Hi all, Could someone sponsor this new package [1] ? Package name: beagle URL: https://faculty.washington.edu/browning/beagle/beagle.html License: GPL3+ Programming Lang: Java Description: Genotypic imputation that works on phased genotypes. Beagle performs genotype calling, genotype phasing,

Re: Artemis: fix for #808851

2016-03-26 Thread Afif Elghraoui
Hello, على السبت 26 آذار 2016 ‫02:56، كتب Sascha Steinbiss: > [vagrant@vagrant-debian:~] $ sudo dpkg -i > /vagrant/artemis_16.0.0+dfsg-5_all.deb > Selecting previously unselected package artemis. > (Reading database ... 130551 files and directories currently installed.) > Preparing to unpack

Re: GSOC [Continuous Integration for all biological applications inside Debian]

2016-03-26 Thread Andreas Tille
On Sat, Mar 26, 2016 at 01:57:28AM +0200, Canberk Koç wrote: > I made contact with PyloPthias article maintainer as u said and he said he > will make contact the main developer (and be pleased about it :) ) to make > program codes more understandable and packable for debian standarts. > I made

Re: Artemis: fix for #808851

2016-03-26 Thread Sascha Steinbiss
Hi Afif, > > I noticed that Artemis was removed from testing a while ago, and > > one reason was bug #808851. You apparently started to fix it > > (thanks!) but haven't seen an upload for a fixed version, so as I > > had some time to spare this morning I looked at it. I just pushed > > the last