Auto creation of docker images from Debian (Med) packages?

2017-10-11 Thread Michael Crusoe
Hello, A quick internet search failed me, so my apologies if the answer to this is well known. Is there a service that automatically builds software containers for each Debian Med application* package? As discussed at this week's biocontainers workshop, while they themselves won't be building co

Re: Auto creation of docker images from Debian (Med) packages?

2017-10-11 Thread Andreas Tille
Hi Michael, On Wed, Oct 11, 2017 at 05:26:18PM +0200, Michael Crusoe wrote: > A quick internet search failed me, so my apologies if the answer to this is > well known. I do not know anything about such a service that sounds very sensible. Would be probably a nice Outreachy / GSoC project. Kind r

Re: Auto creation of docker images from Debian (Med) packages?

2017-10-11 Thread Andreas Tille
Hi Yaroslav, On Wed, Oct 11, 2017 at 04:36:23PM -0400, Yaroslav Halchenko wrote: > For NeuroDebian > > we auto generate docker images using their stock utility (stockbrew or what > it became), see https://github.com/neurodebian/dockerfiles > > For singularity, we auto generate just one "ultima

Re: Auto creation of docker images from Debian (Med) packages?

2017-10-12 Thread Olivier Sallou
On 10/11/2017 05:26 PM, Michael Crusoe wrote: > Hello, > > A quick internet search failed me, so my apologies if the answer to > this is well known. > > Is there a service that automatically builds software containers for > each Debian Med application* package? > > As discussed at this week's bio

Re: Auto creation of docker images from Debian (Med) packages?

2017-10-12 Thread Michael Crusoe
2017-10-12 10:59 GMT+03:00 Olivier Sallou : > > > On 10/11/2017 05:26 PM, Michael Crusoe wrote: > > Hello, > > A quick internet search failed me, so my apologies if the answer to this > is well known. > > Is there a service that automatically builds software containers for each > Debian Med applic

Re: Auto creation of docker images from Debian (Med) packages?

2017-10-12 Thread Yaroslav Halchenko
On Thu, 12 Oct 2017, Andreas Tille wrote: > > we auto generate docker images using their stock utility (stockbrew or what > > it became), see https://github.com/neurodebian/dockerfiles > > For singularity, we auto generate just one "ultimate one" - > > https://github.com/neurodebian/neurodebian