Re: libsbml5

2012-04-04 Thread Thorsten Alteholz
On Tue, 3 Apr 2012, Ivo Maintz wrote: I fixed this. strip is now only called for this libs, if libsbml5 is build with matlab. Hmm, there seems to be a problem with dependencies (no swig found if swig2.0 is installed). The logs are at: https://buildd.debian.org/status/package.php?p=libsbml

Re: libsbml5

2012-04-03 Thread Ivo Maintz
Halllo, > Hmm, without matlab on my computer: >dh_strip --dbg-package=libsbml5-dbg >strip --remove-section=.comment > debian/libsbml5-matlab/usr/lib/*.mexa64 strip: > 'debian/libsbml5-matlab/usr/lib/*.mexa64': No such file make: *** > [binary-arch] Error 1 I f

Re: libsbml5

2012-04-02 Thread Thorsten Alteholz
On Mon, 2 Apr 2012, Ivo Maintz wrote: I think, it's ready... Hmm, without matlab on my computer: dh_strip --dbg-package=libsbml5-dbg strip --remove-section=.comment debian/libsbml5-matlab/usr/lib/*.mexa64 strip: 'debian/libsbml5-matlab/usr/lib/*.mexa64': No s

Re: libsbml5

2012-04-02 Thread Ivo Maintz
Hi, I think, it's ready... Best, Ivo Andreas Tille schrieb : > On Fri, Mar 30, 2012 at 02:06:42PM +0200, Ivo Maintz wrote: > > > > better: it's solved now by inserting a line into debian/rules: > > "strip --remove-section=.comment > > d

Re: libsbml5

2012-03-30 Thread Andreas Tille
On Fri, Mar 30, 2012 at 02:06:42PM +0200, Ivo Maintz wrote: > > better: it's solved now by inserting a line into debian/rules: > "strip --remove-section=.comment > debian/libsbml5-octave/$(OCTAVE_PATH)/*.mex" > ... > I inserted some other code into debian/rule

Re: libsbml5

2012-03-30 Thread Ivo Maintz
Hi Thorsten, [...] > >> I: libsbml5-octave: binary-has-unneeded-section > >> usr/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/TranslateSBML.mex > >> .comment > > > > I have no idea, how to fix this. But it's not critical, right? >

Re: libsbml5

2012-03-29 Thread Thorsten Alteholz
Hi Ivo, On Thu, 29 Mar 2012, Ivo Maintz wrote: I: libsbml5-octave: binary-has-unneeded-section usr/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu/OutputSBML.mex .comment I: libsbml5-octave: binary-has-unneeded-section usr/lib/x86_64-linux-gnu/octave/site/oct/x86_64-pc-linux-gnu

Re: libsbml5

2012-03-29 Thread Ivo Maintz
Hi Thorsten, Thorsten Alteholz schrieb : > Hi Ivo, > > On Wed, 28 Mar 2012, Ivo Maintz wrote: > > But now it should be ready for upload (also to close bug #665837). > > after building the package, I got some I:-lines from lintian: > > I: libsbml5-dev: package-conta

Re: libsbml5

2012-03-28 Thread Thorsten Alteholz
Hi Ivo, On Wed, 28 Mar 2012, Ivo Maintz wrote: But now it should be ready for upload (also to close bug #665837). after building the package, I got some I:-lines from lintian: I: libsbml5-dev: package-contains-empty-directory usr/lib/jni/ I: libsbml5-dev: package-contains-empty-directory usr

Re: libsbml5

2012-03-28 Thread Andreas Tille
000 +0200 @@ -102,8 +102,7 @@ Conflicts: libsbml4-matlab Architecture: any Depends: ${shlibs:Depends}, ${misc:Depends}, - libsbml5, - libc6 (>= 2.3) + libsbml5 Description: System Biology Markup Language library - Matlab bindings LibSBML is a library designed to help you read, write, mani

libsbml5

2012-03-28 Thread Ivo Maintz
Hi, I re-added debian/control.in; this file is used by debian/rules to build a proper debian/control, dependend on building matlab binding or not. But now it should be ready for upload (also to close bug #665837). Best, Ivo signature.asc Description: PGP signature

Re: libsbml4 and libsbml5

2012-01-31 Thread Ivo Maintz
Andreas Tille schrieb : > On Tue, Jan 31, 2012 at 03:12:40PM +0100, Ivo Maintz wrote: > > Anyway, its located in the svn in > > packages/libsbml/branches/libsbml4. It's the right place? > > It would be the right place ... if you commit (can't see it there). It's now commited... > > But another

Re: libsbml4 and libsbml5

2012-01-31 Thread Andreas Tille
On Tue, Jan 31, 2012 at 03:12:40PM +0100, Ivo Maintz wrote: > Anyway, its located in the svn in packages/libsbml/branches/libsbml4. > It's the right place? It would be the right place ... if you commit (can't see it there). > But another (more critical) problem is pbuilder - I can't build > libsb

libsbml4 and libsbml5

2012-01-31 Thread Ivo Maintz
Hi all, The libsbml5 is already in testing. But copasi 4.8.35 (the newest version) needs still libsbml4. Both can be installed on one machine well (except the *dev packages). I prepared a package for libsbml4, but I'm not shure, how to handle it - should I file an ITP bug for libsbml4