[med-svn] [fasttree] branch upstream updated (520fc03 -> caef722)

2017-09-09 Thread Thorsten Alteholz
This is an automated email from the git hooks/post-receive script. alteholz pushed a change to branch upstream in repository fasttree. from 520fc03 Imported Upstream version 2.1.9 new caef722 Import Upstream version 2.1.10 The 1 revisions listed above as "new" are entirely

[med-svn] [fasttree] 01/01: pristine-tar data for fasttree_2.1.10.orig.tar.xz

2017-09-09 Thread Thorsten Alteholz
This is an automated email from the git hooks/post-receive script. alteholz pushed a commit to branch pristine-tar in repository fasttree. commit 1bd77ab82e316ff99f9e390202ed6d52af68eb2b Author: Thorsten Alteholz <deb...@alteholz.de> Date: Sat Sep 9 19:11:35 2017 +0200 pristine-ta

[med-svn] [fasttree] branch pristine-tar updated (e605955 -> 1bd77ab)

2017-09-09 Thread Thorsten Alteholz
This is an automated email from the git hooks/post-receive script. alteholz pushed a change to branch pristine-tar in repository fasttree. from e605955 pristine-tar data for fasttree_2.1.9.orig.tar.xz new 1bd77ab pristine-tar data for fasttree_2.1.10.orig.tar.xz The 1

[med-svn] [fasttree] annotated tag upstream/2.1.10 created (now 772ea82)

2017-09-09 Thread Thorsten Alteholz
This is an automated email from the git hooks/post-receive script. alteholz pushed a change to annotated tag upstream/2.1.10 in repository fasttree. at 772ea82 (tag) tagging caef722af6dc73fb315ed4b5da086305f5c54799 (commit) replaces upstream/2.1.9 tagged by Thorsten Alteholz

[med-svn] [fasttree] annotated tag debian/2.1.10-1 created (now 78cd99f)

2017-09-09 Thread Thorsten Alteholz
This is an automated email from the git hooks/post-receive script. alteholz pushed a change to annotated tag debian/2.1.10-1 in repository fasttree. at 78cd99f (tag) tagging 780b1a6b75efc4947b0d4592780a1b7372e137e3 (commit) replaces debian/2.1.9-2 tagged by Thorsten Alteholz

[med-svn] [fasttree] 02/02: Import Debian changes 2.1.10-1

2017-09-09 Thread Thorsten Alteholz
This is an automated email from the git hooks/post-receive script. alteholz pushed a commit to branch master in repository fasttree. commit 780b1a6b75efc4947b0d4592780a1b7372e137e3 Merge: 262f9d1 caef722 Author: Thorsten Alteholz <deb...@alteholz.de> Date: Sat Sep 9 19:00:00 2017

[med-svn] [fasttree] branch master updated (262f9d1 -> 780b1a6)

2017-09-09 Thread Thorsten Alteholz
This is an automated email from the git hooks/post-receive script. alteholz pushed a change to branch master in repository fasttree. from 262f9d1 Prepare for upload to unstable new caef722 Import Upstream version 2.1.10 new 780b1a6 Import Debian changes 2.1.10-1 The

[med-svn] [fasttree] 01/02: Import Upstream version 2.1.10

2017-09-09 Thread Thorsten Alteholz
This is an automated email from the git hooks/post-receive script. alteholz pushed a commit to branch master in repository fasttree. commit caef722af6dc73fb315ed4b5da086305f5c54799 Author: Thorsten Alteholz <deb...@alteholz.de> Date: Sat Sep 9 19:11:34 2017 +0200 Import Upstream v

[med-svn] r16815 - trunk/packages/mira/trunk/debian

2014-04-26 Thread Thorsten Alteholz
=== --- trunk/packages/mira/trunk/debian/changelog 2014-04-25 22:17:49 UTC (rev 16814) +++ trunk/packages/mira/trunk/debian/changelog 2014-04-26 18:02:31 UTC (rev 16815) @@ -1,3 +1,9 @@ +mira (4.0.2-1) unstable; urgency=low + + * new upstream version + + -- Thorsten Alteholz deb...@alteholz.de Sat, 26

[med-svn] r16569 - in trunk/packages/vcftools/trunk/debian: . patches

2014-04-04 Thread Thorsten Alteholz
UTC (rev 16568) +++ trunk/packages/vcftools/trunk/debian/changelog 2014-04-04 17:26:10 UTC (rev 16569) @@ -1,3 +1,10 @@ +vcftools (0.1.12+dfsg-1) unstable; urgency=low + + * new upstream version + * debian/control: standard bumped to 3.9.5 (no changes) + + -- Thorsten Alteholz deb

[med-svn] r16570 - trunk/packages/vcftools/trunk/debian

2014-04-04 Thread Thorsten Alteholz
Author: alteholz Date: 2014-04-04 17:33:46 + (Fri, 04 Apr 2014) New Revision: 16570 Modified: trunk/packages/vcftools/trunk/debian/rules Log: do not use debug prints Modified: trunk/packages/vcftools/trunk/debian/rules ===

[med-svn] r16410 - trunk/packages/parsinsert/trunk/debian

2014-03-10 Thread Thorsten Alteholz
Author: alteholz Date: 2014-03-10 13:18:28 + (Mon, 10 Mar 2014) New Revision: 16410 Modified: trunk/packages/parsinsert/trunk/debian/copyright Log: it should be ...+ Modified: trunk/packages/parsinsert/trunk/debian/copyright

[med-svn] r15837 - trunk/packages/mgltools/pmv/trunk/debian/patches

2014-01-19 Thread Thorsten Alteholz
Author: alteholz Date: 2014-01-19 16:20:10 + (Sun, 19 Jan 2014) New Revision: 15837 Added: trunk/packages/mgltools/pmv/trunk/debian/patches/indentiationStylesCommands.patch Log: argh, it is still needed to maintain this version Copied:

[med-svn] r15072 - trunk/packages/uc-echo/trunk/debian

2013-10-30 Thread Thorsten Alteholz
2013-10-30 15:22:10 UTC (rev 15071) +++ trunk/packages/uc-echo/trunk/debian/changelog 2013-10-30 21:41:47 UTC (rev 15072) @@ -1,3 +1,9 @@ +uc-echo (1.12-3) unstable; urgency=low + + * debian/rules: more architectures don't need -m64 + + -- Thorsten Alteholz deb...@alteholz.de Wed, 30 Oct

[med-svn] r15046 - in trunk/packages/uc-echo/trunk/debian: . patches

2013-10-29 Thread Thorsten Alteholz
: #727657) + * add patch to compile on mips/mipsel + + -- Thorsten Alteholz deb...@alteholz.de Mon, 28 Oct 2013 19:00:07 +0100 + uc-echo (1.12-1) unstable; urgency=low * initial version (Closes: #704902) Modified: trunk/packages/uc-echo/trunk/debian/control

[med-svn] r15047 - trunk/packages/uc-echo/trunk/debian

2013-10-29 Thread Thorsten Alteholz
15047) @@ -1,9 +1,10 @@ uc-echo (1.12-2) unstable; urgency=low * debian/control: use g++-multilib only when available (Closes: #727657) + * debian/control: use canonical vcs-fields * add patch to compile on mips/mipsel - -- Thorsten Alteholz deb...@alteholz.de Mon, 28 Oct 2013 19:00:07

[med-svn] r14916 - trunk/packages/staden-io-lib/trunk/debian

2013-10-22 Thread Thorsten Alteholz
to build on hurd_i386 - * no need to remove package from architecture anymore (Closes: #726875) + * no need to remove package from mips anymore (Closes: #726875) -- Thorsten Alteholz deb...@alteholz.de Mon, 21 Oct 2013 18:10:59 +0200 ___ debian-med

[med-svn] r14907 - in trunk/packages/staden-io-lib/trunk/debian: . patches

2013-10-21 Thread Thorsten Alteholz
/rules: tests on sparc fail (no reason found yet) + * debian/patches: add patch to build on hurd_i386 + * no need to remove package from architecture anymore (Closes: #726875) + + -- Thorsten Alteholz deb...@alteholz.de Mon, 21 Oct 2013 18:10:59 +0200 + staden-io-lib (1.13.2-2) unstable; urgency=low

[med-svn] r14763 - in trunk/packages/cluster3/trunk/debian: . patches

2013-09-26 Thread Thorsten Alteholz
UTC (rev 14763) @@ -1,3 +1,9 @@ +cluster3 (1.52-2) unstable; urgency=low + + * add patch from Stefano Rivera (build on armhf) (Closes: #723561) + + -- Thorsten Alteholz deb...@alteholz.de Thu, 26 Sep 2013 18:00:00 +0200 + cluster3 (1.52-1) unstable; urgency=low * rebuild needed for motif

[med-svn] r14731 - in trunk/packages/treeview/trunk/debian: . patches

2013-09-17 Thread Thorsten Alteholz
; urgency=low + + * New upstream release. + + -- Thorsten Alteholz deb...@alteholz.de Tue, 17 Sep 2013 18:00:00 +0200 + treeview (1.1.6.3+dfsg-1) unstable; urgency=low * New upstream release. Modified: trunk/packages/treeview/trunk/debian/patches/classpath.patch

[med-svn] r14724 - in trunk/packages/cluster3/trunk/debian: . patches

2013-09-16 Thread Thorsten Alteholz
/control: canonical vcs-* fields + * debin/control: bumped to 3.9.4 (no changes) + + -- Thorsten Alteholz deb...@alteholz.de Mon, 16 Sep 2013 19:00:00 +0200 + cluster3 (1.50-1) unstable; urgency=low [ Thorsten Alteholz ] Modified: trunk/packages/cluster3/trunk/debian/control

[med-svn] r14725 - trunk/packages/cluster3/trunk/debian

2013-09-16 Thread Thorsten Alteholz
Author: alteholz Date: 2013-09-16 17:48:11 + (Mon, 16 Sep 2013) New Revision: 14725 Modified: trunk/packages/cluster3/trunk/debian/rules Log: better this way Modified: trunk/packages/cluster3/trunk/debian/rules === ---

[med-svn] r14677 - trunk/packages/dssp/trunk/debian

2013-09-12 Thread Thorsten Alteholz
Author: alteholz Date: 2013-09-12 17:42:43 + (Thu, 12 Sep 2013) New Revision: 14677 Modified: trunk/packages/dssp/trunk/debian/control Log: use canonical vcs Modified: trunk/packages/dssp/trunk/debian/control === ---

[med-svn] r14326 - trunk/packages/mgltools/sff/trunk/debian

2013-08-03 Thread Thorsten Alteholz
upload with different debian version (due to missing bhtree) + + -- Thorsten Alteholz deb...@alteholz.de Sat, 03 Aug 2013 16:00:00 +0200 + mgltools-sff (1.5.7~rc1~cvs.20130519-1) unstable; urgency=low * New upstream version. ___ debian-med-commit

[med-svn] r14171 - trunk/packages/python-sqlsoup/trunk/debian

2013-07-16 Thread Thorsten Alteholz
(0.9.0-1) unstable; urgency=low * initial release (Closes: #712411) + * debian/copyright: add missing entries - -- Thorsten Alteholz deb...@alteholz.de Sat, 15 Jun 2013 19:00:00 +0200 + -- Thorsten Alteholz deb...@alteholz.de Tue, 16 Jul 2013 18:00:00 +0200 Modified: trunk/packages

[med-svn] r14159 - trunk/packages/epigrass/tags

2013-07-14 Thread Thorsten Alteholz
Author: alteholz Date: 2013-07-14 15:45:49 + (Sun, 14 Jul 2013) New Revision: 14159 Added: trunk/packages/epigrass/tags/2.2.2-1/ Log: add tag for 2.2.2-1 ___ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org

[med-svn] r14160 - in trunk/packages/epigrass: . branches branches/2.2.2-1 branches/2.2.2-1/debian

2013-07-14 Thread Thorsten Alteholz
/epigrass/branches/2.2.2-1/debian/changelog 2013-07-14 15:46:54 UTC (rev 14160) @@ -1,3 +1,9 @@ +epigrass (2.2.2-2) unstable; urgency=low + + * rebuild package and remove dependency on python-sqlalchemy0.8 (Closes: #715433) + + -- Thorsten Alteholz deb...@alteholz.de Sun, 14 Jul 2013 17:00:00 +0200

[med-svn] r14161 - trunk/packages/epigrass/branches/2.2.2-1/debian

2013-07-14 Thread Thorsten Alteholz
and remove dependency on python-sqlalchemy0.8 (Closes: #715433) + * rebuild and remove dependency on python-sqlalchemy0.8 (Closes: #715433) -- Thorsten Alteholz deb...@alteholz.de Sun, 14 Jul 2013 17:00:00 +0200 ___ debian-med-commit mailing

[med-svn] r13886 - trunk/packages/mgltools/cadd/trunk/debian

2013-06-08 Thread Thorsten Alteholz
~rc1~cvs.20130519-2) unstable; urgency=low + + * debian/rules: remove obsolete file with syntax errors + (Closes: #711455) + + -- Thorsten Alteholz deb...@alteholz.de Sat, 08 Jun 2013 17:00:00 +0200 + mgltools-cadd (1.5.7~rc1~cvs.20130519-1) unstable; urgency=low * New

[med-svn] r13855 - in trunk/packages/mira/trunk/debian: . patches

2013-06-06 Thread Thorsten Alteholz
=== --- trunk/packages/mira/trunk/debian/patches/spelling.patch (rev 0) +++ trunk/packages/mira/trunk/debian/patches/spelling.patch 2013-06-06 18:08:34 UTC (rev 13855) @@ -0,0 +1,67 @@ +Author: Thorsten Alteholz deb...@alteholz.de +Description: lintian

[med-svn] r13848 - in trunk/packages/mira/trunk/debian: . patches

2013-06-05 Thread Thorsten Alteholz
flags for fastatool +extended description +docbase +Up to now the new version builds with old gcc and old boost. + + -- Thorsten Alteholz deb...@alteholz.de Wed, 05 Jun 2013 18:00:01 +0200 + mira (3.4.0.1-3) unstable; urgency=low [ Charles

[med-svn] r13849 - trunk/packages/libzeep/trunk/debian

2013-06-05 Thread Thorsten Alteholz
Author: alteholz Date: 2013-06-05 20:08:47 + (Wed, 05 Jun 2013) New Revision: 13849 Modified: trunk/packages/libzeep/trunk/debian/changelog trunk/packages/libzeep/trunk/debian/control Log: close bug Modified: trunk/packages/libzeep/trunk/debian/changelog

[med-svn] r13798 - trunk/packages/autodocksuite/trunk/debian

2013-06-02 Thread Thorsten Alteholz
=== --- trunk/packages/autodocksuite/trunk/debian/control 2013-06-02 09:57:40 UTC (rev 13797) +++ trunk/packages/autodocksuite/trunk/debian/control 2013-06-02 14:02:48 UTC (rev 13798) @@ -8,7 +8,7 @@ Andreas Tille ti...@debian.org, Thorsten Alteholz deb...@alteholz.de Build-Depends

[med-svn] r13791 - in trunk/packages/mgltools: cmolkit/trunk/debian molkit/trunk/debian

2013-06-01 Thread Thorsten Alteholz
+ * debian/control: add swig to build dependencies -- Thorsten Alteholz deb...@alteholz.de Sun, 19 May 2013 12:00:00 +0200 Modified: trunk/packages/mgltools/cmolkit/trunk/debian/control === --- trunk/packages/mgltools/cmolkit/trunk

[med-svn] r13792 - trunk/packages/mgltools/cadd/trunk/debian

2013-06-01 Thread Thorsten Alteholz
/control: bump standard to 3.9.4 (no changes) * debian/control: remove DM-Upload-Allowed * debian/copyright: add permission for debian to distribute mgltools + * debian/rules: remove x bit from some helper scripts -- Thorsten Alteholz deb...@alteholz.de Sun, 19 May 2013 12:00:00 +0200

[med-svn] r13795 - in trunk/packages/saint/trunk/debian: . patches

2013-06-01 Thread Thorsten Alteholz
13795) @@ -1,3 +1,9 @@ +saint (2.3.4+dfsg-2) unstable; urgency=low + + * add patch ld-as-needed.patch from Julian Taylor (Closes: #710364) + + -- Thorsten Alteholz deb...@alteholz.de Sat, 01 Jun 2013 22:00:00 +0200 + saint (2.3.4+dfsg-1) unstable; urgency=low * new upstream version Added: trunk

[med-svn] r13796 - trunk/packages/qrisk2/trunk/debian

2013-06-01 Thread Thorsten Alteholz
; urgency=low - * debian/control: remove . at end of long description (Closes: #705791) + * new upstream version: QRISK2-2013 release + * debian/control: remove . at end of long description (Closes: #705791) - -- Thorsten Alteholz deb...@alteholz.de Mon, 22 Apr 2013 18:00:00 +0200 + -- Thorsten

[med-svn] r13771 - trunk/packages/libzeep/trunk/debian

2013-05-30 Thread Thorsten Alteholz
Author: alteholz Date: 2013-05-30 17:46:54 + (Thu, 30 May 2013) New Revision: 13771 Modified: trunk/packages/libzeep/trunk/debian/ trunk/packages/libzeep/trunk/debian/changelog trunk/packages/libzeep/trunk/debian/control Log: minor correction Property changes on:

[med-svn] r13717 - trunk/packages/melting/trunk/debian

2013-05-27 Thread Thorsten Alteholz
2013-05-27 19:58:56 UTC (rev 13717) @@ -1,3 +1,11 @@ +melting (5.1.0-1) UNRELEASED; urgency=low + + * new upstream version + * debian/watch: new syntax + * debian/control: bump standard to 3.9.4 (no changes) + + -- Thorsten Alteholz deb...@alteholz.de Sun, 26 May 2013 18:00:00 +0200

[med-svn] r13712 - in trunk/packages/python-cogent/trunk/debian: . patches

2013-05-26 Thread Thorsten Alteholz
+ + [ Tim Booth ] * Added back python2 helper and invoked dh_numpy to sort deps * Split out docs into separate package * Added extra cleanup to dh_clean - -- Tim Booth tbo...@ceh.ac.uk Tue, 13 Nov 2012 15:26:47 + + -- Thorsten Alteholz deb...@alteholz.de Sun, 16 May 2013 18:00:00

[med-svn] r13680 - in trunk/packages/mgltools: . autodocktools/trunk/debian bhtree/trunk/debian cadd/trunk/debian cmolkit/trunk/debian dejavu/trunk/debian geomutils/trunk/debian gle/trunk/debian mglut

2013-05-20 Thread Thorsten Alteholz
+autodocktools (1.5.7~rc1~cvs.20130519-1) unstable; urgency=low * New upstream version. * debian/control: bump standard to 3.9.4 (no changes) + * debian/control: remove DM-Upload-Allowed - -- Thorsten Alteholz deb...@alteholz.de Sat, 16 May 2013 12:00:00 +0200 + -- Thorsten Alteholz deb

[med-svn] r13651 - trunk/packages/mgltools/mgltools-external-get-orig-source

2013-05-19 Thread Thorsten Alteholz
Author: alteholz Date: 2013-05-19 16:59:41 + (Sun, 19 May 2013) New Revision: 13651 Modified: trunk/packages/mgltools/mgltools-external-get-orig-source/current-branch trunk/packages/mgltools/mgltools-external-get-orig-source/rc-version Log: should be 1.5.7.RC1 now Modified:

[med-svn] r13655 - trunk/packages/mgltools/packging_helpers

2013-05-19 Thread Thorsten Alteholz
Author: alteholz Date: 2013-05-19 17:43:08 + (Sun, 19 May 2013) New Revision: 13655 Modified: trunk/packages/mgltools/packging_helpers/svn_buildpackage_all Log: no .svn directory anymore Modified: trunk/packages/mgltools/packging_helpers/svn_buildpackage_all

[med-svn] r13639 - trunk/packages/mgltools/mgltools-external-get-orig-source

2013-05-18 Thread Thorsten Alteholz
Author: alteholz Date: 2013-05-18 09:48:37 + (Sat, 18 May 2013) New Revision: 13639 Added: trunk/packages/mgltools/mgltools-external-get-orig-source/rc-version.ok Modified: trunk/packages/mgltools/mgltools-external-get-orig-source/rc-version Log: new release Modified:

[med-svn] r13641 - trunk/packages/mgltools/mgltools-external-get-orig-source

2013-05-18 Thread Thorsten Alteholz
Author: alteholz Date: 2013-05-18 11:52:25 + (Sat, 18 May 2013) New Revision: 13641 Modified: trunk/packages/mgltools/mgltools-external-get-orig-source/get-orig-source Log: we sometimes have a real release Modified:

[med-svn] r13644 - in trunk/packages/mgltools: autodocktools/trunk/debian bhtree/trunk/debian cadd/trunk/debian cmolkit/trunk/debian dejavu/trunk/debian geomutils/trunk/debian gle/trunk/debian mglutil

2013-05-18 Thread Thorsten Alteholz
/packages/mgltools/autodocktools/trunk/debian/changelog 2013-05-18 14:48:35 UTC (rev 13644) @@ -1,3 +1,10 @@ +autodocktools (1.5.6-1) unstable; urgency=low + + * New upstream version. + * debian/control: bump standard to 3.9.4 (no changes) + + -- Thorsten Alteholz deb...@alteholz.de Sat, 16 May

[med-svn] r13604 - in trunk/packages/epigrass/trunk/debian: . patches

2013-05-16 Thread Thorsten Alteholz
/control: add new dependency on python-visual + * debian/copyright: add correct Format: line + + -- Thorsten Alteholz deb...@alteholz.de Sun, 12 May 2013 18:00:00 +0200 + epigrass (2.0.4-3) unstable; urgency=low * debian/control: Homepage has changed to Modified: trunk/packages/epigrass/trunk

[med-svn] r13609 - in trunk/packages/saint/trunk/debian: . patches

2013-05-16 Thread Thorsten Alteholz
- -- Andreas Tille ti...@debian.org Fri, 24 Aug 2012 16:20:26 +0200 + -- Thorsten Alteholz deb...@alteholz.de Thu, 16 May 2013 21:20:00 +0200 saint (2.3.3-1) unstable; urgency=low Modified: trunk/packages/saint/trunk/debian/control

[med-svn] r13507 - trunk/packages/fasttree/trunk/debian

2013-05-06 Thread Thorsten Alteholz
upstream version + * debian/control: remove DM-Upload-Allowed: + * debian/control: bump standards version to 3.9.4 + + -- Thorsten Alteholz deb...@alteholz.de Mon, 06 May 2013 18:00:00 +0200 + fasttree (2.1.5-1) unstable; urgency=low * New upstream version Modified: trunk/packages/fasttree

[med-svn] r13482 - trunk/packages/gnuhealth/trunk/debian

2013-05-04 Thread Thorsten Alteholz
Author: alteholz Date: 2013-05-04 13:02:21 + (Sat, 04 May 2013) New Revision: 13482 Modified: trunk/packages/gnuhealth/trunk/debian/rules Log: add get-orig-source target Modified: trunk/packages/gnuhealth/trunk/debian/rules

[med-svn] r13470 - in trunk/packages/proalign/trunk/debian: . scripts

2013-05-02 Thread Thorsten Alteholz
13470) @@ -5,7 +5,8 @@ DM-Upload-Allowed: yes Uploaders: Andreas Tille ti...@debian.org, Thorsten Alteholz deb...@alteholz.de -Build-Depends: debhelper (= 9) +Build-Depends: debhelper (= 9), + default-jdk Standards-Version: 3.9.4 Homepage: http://ueg.ulb.ac.be/ProAlign/ Vcs-Browser: http

[med-svn] r13468 - in trunk/packages/proalign/trunk/debian: . scripts source

2013-05-01 Thread Thorsten Alteholz
+1,5 @@ -proalign (0.603-1) unstable; urgency=low +proalign (0.603-1) UNRELEASED; urgency=low * Initial release (Closes: #378290) - -- Andreas Tille ti...@debian.org Thu, 24 May 2012 14:30:13 +0200 + -- Thorsten Alteholz deb...@alteholz.de Tue, 01 May 2013 18:00:00 +0200 Modified: trunk

[med-svn] r13446 - in trunk/packages/ecell/trunk/debian: . source

2013-04-30 Thread Thorsten Alteholz
? + * TODO: take care of boost compile errors [ Thorsten Alteholz ] * new upstream version Modified: trunk/packages/ecell/trunk/debian/compat === --- trunk/packages/ecell/trunk/debian/compat2013-04-29 21:04:06 UTC (rev 13445

[med-svn] r13438 - in trunk/packages: . thera-pi thera-pi/trunk thera-pi/trunk/debian thera-pi/trunk/debian/source

2013-04-29 Thread Thorsten Alteholz
+Maintainer: Debian Med Packaging Team debian-med-packag...@lists.alioth.debian.org +Uploaders: Andreas Tille ti...@debian.org, + Thorsten Alteholz deb...@alteholz.de +Build-Depends: debhelper (= 9), + default-jdk +Standards-Version: 3.9.4 +Homepage: http://www.thera-pi.org/ +Vcs-Browser: http

[med-svn] r13430 - in trunk/packages/treeview/trunk: . debian debian/patches

2013-04-27 Thread Thorsten Alteholz
according licenses in debian/copyright (in the - latter case package needs to go to non-free [ Thorsten Alteholz ] * debian/watch: watch file added @@ -25,7 +18,7 @@ * debian/source/format: 3.0 (quilt) * Added myself to Uploaders - -- Thorsten Alteholz deb...@alteholz.de Mon

[med-svn] r13431 - trunk/packages/treeview/trunk/debian

2013-04-27 Thread Thorsten Alteholz
Author: alteholz Date: 2013-04-27 10:17:02 + (Sat, 27 Apr 2013) New Revision: 13431 Added: trunk/packages/treeview/trunk/debian/upstream Log: upstream information Added: trunk/packages/treeview/trunk/debian/upstream === ---

[med-svn] r13418 - in trunk/packages/treeview/trunk/debian: . patches

2013-04-25 Thread Thorsten Alteholz
(rev 13418) @@ -1,10 +1,20 @@ Description: do not use internal lib Author: Thorsten Alteholz deb...@alteholz.de -Index: TreeView-1.1.6r2-src/build.xml +Index: treeview_1.1.6.2+dfsg.orig/build.xml === TreeView-1.1.6r2-src.orig

[med-svn] r13380 - in trunk/packages/treeview/trunk/debian: . patches scripts

2013-04-22 Thread Thorsten Alteholz
from source or list according licenses in debian/copyright (in the latter case package needs to go to non-free @@ -10,8 +12,8 @@ [ Thorsten Alteholz ] * debian/watch: watch file added * debian/rules: target get-orig-source added - * debian/control: debhelper 8

[med-svn] r13381 - trunk/packages/qrisk2/trunk/debian

2013-04-22 Thread Thorsten Alteholz
) UNRELEASED; urgency=low + + * debian/control: remove . at end of long description (Closes: #705791) + + -- Thorsten Alteholz deb...@alteholz.de Mon, 22 Apr 2013 18:00:00 +0200 + qrisk2 (0.0.r30-1) unstable; urgency=low * Initial release (Closes: #705694) @@ -4,4 +10,3 @@ Part of packaging has

[med-svn] r13358 - trunk/packages/visionegg/trunk/debian

2013-04-20 Thread Thorsten Alteholz
Author: alteholz Date: 2013-04-20 17:09:25 + (Sat, 20 Apr 2013) New Revision: 13358 Modified: trunk/packages/visionegg/trunk/debian/upstream Log: typo Modified: trunk/packages/visionegg/trunk/debian/upstream === ---

[med-svn] r13349 - in trunk/packages/qrisk2/trunk/debian: . patches source

2013-04-18 Thread Thorsten Alteholz
(Closes: #705694) +Part of packaging has been done by Andreas Tille - -- Andreas Tille ti...@debian.org Thu, 07 Jun 2012 13:16:01 +0200 + -- Thorsten Alteholz deb...@alteholz.de Thu, 18 Apr 2013 18:00:00 +0200 + Modified: trunk/packages/qrisk2/trunk/debian/control

[med-svn] r13324 - in trunk/packages: . visionegg visionegg/trunk visionegg/trunk/debian visionegg/trunk/debian/source

2013-04-16 Thread Thorsten Alteholz
(1.2.1-1) unstable; urgency=low + + * initial version (Closes: #365856) + + -- Thorsten Alteholz deb...@alteholz.de Tue, 16 Apr 2013 18:00:07 +0200 + Added: trunk/packages/visionegg/trunk/debian/compat === --- trunk/packages/visionegg

[med-svn] r13311 - trunk/packages/bagpipe/trunk/debian

2013-04-13 Thread Thorsten Alteholz
Author: alteholz Date: 2013-04-13 15:38:56 + (Sat, 13 Apr 2013) New Revision: 13311 Modified: trunk/packages/bagpipe/trunk/debian/control Log: need R package Modified: trunk/packages/bagpipe/trunk/debian/control === ---

[med-svn] r13312 - in trunk/packages/R: . r-other-valdar-bagpipe.backend r-other-valdar-bagpipe.backend/trunk r-other-valdar-bagpipe.backend/trunk/debian r-other-valdar-bagpipe.backend/trunk/debian/so

2013-04-13 Thread Thorsten Alteholz
for package bagpipe, + but waiting for at least version 3 of r-cran-evd (but take it easy!!) + * initial version (Closes: #XX) + + -- Thorsten Alteholz deb...@alteholz.de Tue, 09 Apr 2013 18:00:07 +0200 + Added: trunk/packages/R/r-other-valdar-bagpipe.backend/trunk/debian/compat

[med-svn] r13279 - trunk/packages/bagphenotype/trunk

2013-04-09 Thread Thorsten Alteholz
Author: alteholz Date: 2013-04-09 17:51:55 + (Tue, 09 Apr 2013) New Revision: 13279 Removed: trunk/packages/bagphenotype/trunk/debian/ Log: upstream sources not available anymore, better use bagpipe ___ debian-med-commit mailing list

[med-svn] r13280 - trunk/packages/bagphenotype/trunk

2013-04-09 Thread Thorsten Alteholz
Author: alteholz Date: 2013-04-09 17:52:31 + (Tue, 09 Apr 2013) New Revision: 13280 Added: trunk/packages/bagphenotype/trunk/README.status Log: upstream sources not available anymore, better use bagpipe Added: trunk/packages/bagphenotype/trunk/README.status

[med-svn] r13281 - trunk/packages/bagphenotype

2013-04-09 Thread Thorsten Alteholz
Author: alteholz Date: 2013-04-09 17:53:13 + (Tue, 09 Apr 2013) New Revision: 13281 Removed: trunk/packages/bagphenotype/README trunk/packages/bagphenotype/r-other-valdar-bagphenotype Log: upstream sources not available anymore, better use bagpipe Deleted:

[med-svn] r13282 - in trunk/packages: . bagpipe bagpipe/trunk bagpipe/trunk/debian bagpipe/trunk/debian/script bagpipe/trunk/debian/source

2013-04-09 Thread Thorsten Alteholz
13282) @@ -0,0 +1,6 @@ +bagpipe (2012.02.15-1) UNRELEASED; urgency=low + + * initial version (Closes: #XX) + + -- Thorsten Alteholz deb...@alteholz.de Tue, 09 Apr 2013 18:00:07 +0200 + Added: trunk/packages/bagpipe/trunk/debian/compat

[med-svn] r13270 - in trunk/packages: . python-clips python-clips/trunk python-clips/trunk/debian python-clips/trunk/debian/source

2013-04-08 Thread Thorsten Alteholz
13270) @@ -0,0 +1,6 @@ +python-clips (1.0.7.348+clips-1) unstable; urgency=low + + * initial version (Closes: #577406) + + -- Thorsten Alteholz deb...@alteholz.de Mon, 08 Apr 2013 18:00:07 +0100 + Added: trunk/packages/python-clips/trunk/debian/compat

[med-svn] r13271 - trunk/packages/uc-echo/trunk/debian

2013-04-08 Thread Thorsten Alteholz
Author: alteholz Date: 2013-04-08 17:40:13 + (Mon, 08 Apr 2013) New Revision: 13271 Added: trunk/packages/uc-echo/trunk/debian/upstream Log: add some reference information Added: trunk/packages/uc-echo/trunk/debian/upstream

[med-svn] r13269 - in trunk/packages: . uc-echo uc-echo/trunk uc-echo/trunk/debian uc-echo/trunk/debian/patches uc-echo/trunk/debian/script uc-echo/trunk/debian/source

2013-04-07 Thread Thorsten Alteholz
(rev 0) +++ trunk/packages/uc-echo/trunk/debian/changelog 2013-04-07 14:33:19 UTC (rev 13269) @@ -0,0 +1,6 @@ +uc-echo (1.12-1) unstable; urgency=low + + * initial version (Closes: #704902) + + -- Thorsten Alteholz deb...@alteholz.de Tue, 12 Mar 2013 18:00:07

[med-svn] r13093 - in trunk/packages/vcftools/trunk/debian: . patches

2013-02-24 Thread Thorsten Alteholz
+1,16 @@ -vcftools (0.1.10+dfsg-1) UNRELEASED; urgency=low +vcftools (0.1.10+dfsg-1) unstable; urgency=low + [ Thorsten Alteholz ] + * add man pages for new scripts + * debian/patches/use-dpkg-buildflags.patch: add LDFLAGS to link stage + * debian/vcftools.lintian-overrides: false positive

[med-svn] r13094 - trunk/packages/vcftools/trunk/debian

2013-02-24 Thread Thorsten Alteholz
: Thorsten Alteholz deb...@alteholz.de, Andreas Tille ti...@debian.org Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/vcftools/trunk/ ___ debian-med-commit mailing list debian-med-commit@lists.alioth.debian.org http

[med-svn] r13053 - trunk/packages/autodocksuite/trunk/debian

2013-02-20 Thread Thorsten Alteholz
) experimental; urgency=low + + * debian/rules: remove lto flags again, does not really work + + -- Thorsten Alteholz deb...@alteholz.de Wed, 20 Feb 2013 18:00:00 +0100 + autodocksuite (4.2.5.1-1) experimental; urgency=low * new upstream version Modified: trunk/packages/autodocksuite/trunk/debian

[med-svn] r13045 - in trunk/packages/autodocksuite/trunk/debian: . patches

2013-02-18 Thread Thorsten Alteholz
Alteholz deb...@alteholz.de Sat, 16 Feb 2013 20:42:51 +0100 + -- Thorsten Alteholz deb...@alteholz.de Mon, 18 Feb 2013 19:00:00 +0100 autodocksuite (4.2.3-3) UNRELEASED; urgency=low Modified: trunk/packages/autodocksuite/trunk/debian/control

[med-svn] r12586 - trunk/packages/freemedforms-project/trunk/debian

2012-12-04 Thread Thorsten Alteholz
@@ +freemedforms-project (0.8.0-3) experimental; urgency=low + + * debian/control: fix typo in dependency of freemedforms-libs + + -- Thorsten Alteholz deb...@alteholz.de Tue, 04 Dec 2012 20:00:00 +0100 + freemedforms-project (0.8.0-2) experimental; urgency=low [ Eric Maeker ] Modified: trunk

[med-svn] r12580 - in trunk/packages/vcftools/trunk/debian: . patches

2012-12-02 Thread Thorsten Alteholz
) + * fix get-orig-source to handle dfsg + + -- Thorsten Alteholz deb...@alteholz.de Sun, 02 Dev 2012 19:00:00 +0100 + vcftools (0.1.9+dfsg-1) UNRELEASED; urgency=low * debian/copyright: Modified: trunk/packages/vcftools/trunk/debian/control

[med-svn] r12581 - trunk/packages/vcftools/trunk/debian

2012-12-02 Thread Thorsten Alteholz
to handle dfsg - -- Thorsten Alteholz deb...@alteholz.de Sun, 02 Dev 2012 19:00:00 +0100 + -- Thorsten Alteholz deb...@alteholz.de Sun, 02 Dec 2012 19:00:00 +0100 vcftools (0.1.9+dfsg-1) UNRELEASED; urgency=low ___ debian-med-commit mailing list

[med-svn] r12492 - trunk/packages/fasttree/trunk/debian

2012-11-02 Thread Thorsten Alteholz
=== --- trunk/packages/fasttree/trunk/debian/changelog 2012-11-02 18:19:27 UTC (rev 12491) +++ trunk/packages/fasttree/trunk/debian/changelog 2012-11-02 18:42:52 UTC (rev 12492) @@ -1,3 +1,9 @@ +fasttree (2.1.5-1) unstable; urgency=low + + * New upstream version + + -- Thorsten Alteholz

[med-svn] r11873 - in trunk/packages/cluster3/trunk: . debian

2012-07-23 Thread Thorsten Alteholz
) +++ trunk/packages/cluster3/trunk/debian/control2012-07-23 17:41:47 UTC (rev 11873) @@ -5,9 +5,20 @@ Uploaders: Steffen Moeller moel...@debian.org, Charles Plessy ple...@debian.org, Thorsten Alteholz deb...@alteholz.de -Build-Depends: debhelper (= 9), libmotif-dev, autotools-dev, perl

[med-svn] r11828 - in trunk/packages/cluster3/trunk/debian: . patches source

2012-07-18 Thread Thorsten Alteholz
2012-07-18 17:47:04 UTC (rev 11828) @@ -1,7 +1,5 @@ -cluster3 (1.50-1) UNRELEASED; urgency=low +cluster3 (1.50-1) unstable; urgency=low - * XXX TODO: before uploading the ITP needs to be reopened - [ Thorsten Alteholz ] * New upstream release (1.50). * debian/rules: target get-orig

[med-svn] r11375 - in trunk/packages/meme/trunk: . debian

2012-06-18 Thread Thorsten Alteholz
. Soon Gweon soo...@gmail.com, Thorsten Alteholz deb...@alteholz.de -Build-Depends: debhelper (= 9), dh-autoreconf, libxslt1-dev +Build-Depends: debhelper (= 9), + dh-autoreconf, + libxslt1-dev, + python-all (= 2.6.6-3~) Standards-Version: 3.9.3 Homepage: http://meme.nbcr.net/meme/ Vcs

[med-svn] r11357 - in trunk/packages/fasttree/trunk/debian: . patches

2012-06-15 Thread Thorsten Alteholz
(2.1.4-1) unstable; urgency=low - * Initial release (Closes: #) is the bug number of your ITP + * Initial release (Closes: #677648) - -- Steffen Moeller moel...@debian.org Wed, 02 Mar 2011 18:52:56 +0100 + -- Thorsten Alteholz deb...@alteholz.de Fri, 15 Jun 2012 19:52:56 +0200

[med-svn] r11309 - trunk/packages/plastimatch/trunk/debian

2012-06-12 Thread Thorsten Alteholz
Author: alteholz Date: 2012-06-12 20:30:19 + (Tue, 12 Jun 2012) New Revision: 11309 Modified: trunk/packages/plastimatch/trunk/debian/control trunk/packages/plastimatch/trunk/debian/copyright Log: debhelper dependency needed in control as well, some additions to copyright to calm

[med-svn] r11164 - in trunk/packages/mgltools: bhtree/trunk/debian geomutils/trunk/debian gle/trunk/debian opengltk/trunk/debian pyglf/trunk/debian sff/trunk/debian utpackages/trunk/debian vision/trun

2012-06-01 Thread Thorsten Alteholz
@@ +mgltools-bhtree (1.5.6~rc3~cvs.20120601-1) unstable; urgency=low + + * New upstream version. + * debian/rules: add call to dh_numpy + * debian/control: bump standard to 3.9.3 + + -- Thorsten Alteholz deb...@alteholz.de Fri, 01 Jun 2012 18:00:00 +0200 + mgltools-bhtree (1.5.6~rc3~cvs.20120206-1

[med-svn] r10349 - trunk/packages/libsbml/trunk/debian

2012-04-05 Thread Thorsten Alteholz
+1,11 @@ +libsbml (5.4.1-3) unstable; urgency=low + + * debian/control: removed dependency on swig2.0 (Closes: #667652) +thanks to Peter Green for the hint. + * debian/control: added myself to uploaders + + -- Thorsten Alteholz deb...@alteholz.de Thu, 05 Apr 2012 18:44:30 +0200 + libsbml

[med-svn] r10326 - trunk/packages/R/r-cran-deal/trunk/debian

2012-04-04 Thread Thorsten Alteholz
Author: alteholz Date: 2012-04-04 19:53:40 + (Wed, 04 Apr 2012) New Revision: 10326 Modified: trunk/packages/R/r-cran-deal/trunk/debian/copyright Log: format can have real version now Modified: trunk/packages/R/r-cran-deal/trunk/debian/copyright

[med-svn] r10327 - trunk/packages/R/r-cran-deal/trunk/debian

2012-04-04 Thread Thorsten Alteholz
Author: alteholz Date: 2012-04-04 19:55:57 + (Wed, 04 Apr 2012) New Revision: 10327 Modified: trunk/packages/R/r-cran-deal/trunk/debian/changelog Log: upload to unstable Modified: trunk/packages/R/r-cran-deal/trunk/debian/changelog

[med-svn] r10328 - trunk/packages/R/r-cran-deal/trunk/debian

2012-04-04 Thread Thorsten Alteholz
Author: alteholz Date: 2012-04-04 19:58:01 + (Wed, 04 Apr 2012) New Revision: 10328 Modified: trunk/packages/R/r-cran-deal/trunk/debian/changelog Log: timestamp is important here Modified: trunk/packages/R/r-cran-deal/trunk/debian/changelog

[med-svn] r10288 - trunk/packages/libsbml/trunk/debian

2012-04-03 Thread Thorsten Alteholz
Author: alteholz Date: 2012-04-03 17:16:20 + (Tue, 03 Apr 2012) New Revision: 10288 Modified: trunk/packages/libsbml/trunk/debian/changelog Log: prepare release Modified: trunk/packages/libsbml/trunk/debian/changelog === ---

[med-svn] r10250 - trunk/packages/R/r-cran-deal/trunk/debian

2012-04-02 Thread Thorsten Alteholz
Author: alteholz Date: 2012-04-02 17:52:21 + (Mon, 02 Apr 2012) New Revision: 10250 Modified: trunk/packages/R/r-cran-deal/trunk/debian/control Log: debian/control: tag fixed Modified: trunk/packages/R/r-cran-deal/trunk/debian/control

[med-svn] r10251 - trunk/packages/R/r-cran-deal/trunk/debian

2012-04-02 Thread Thorsten Alteholz
Author: alteholz Date: 2012-04-02 17:58:36 + (Mon, 02 Apr 2012) New Revision: 10251 Modified: trunk/packages/R/r-cran-deal/trunk/debian/control Log: debian/control: standards version 3.9.3 Modified: trunk/packages/R/r-cran-deal/trunk/debian/control

[med-svn] r10252 - trunk/packages/R/r-cran-deal/trunk/debian

2012-04-02 Thread Thorsten Alteholz
Author: alteholz Date: 2012-04-02 18:00:24 + (Mon, 02 Apr 2012) New Revision: 10252 Modified: trunk/packages/R/r-cran-deal/trunk/debian/get-orig-source trunk/packages/R/r-cran-deal/trunk/debian/rules Log: debian/rules: add target get-orig-source and move tar to ../tarballs Modified:

[med-svn] r10207 - trunk/packages/rostlab/librostlab/trunk/debian

2012-03-30 Thread Thorsten Alteholz
Author: alteholz Date: 2012-03-30 17:09:20 + (Fri, 30 Mar 2012) New Revision: 10207 Modified: trunk/packages/rostlab/librostlab/trunk/debian/watch Log: make it accessible from more sites Modified: trunk/packages/rostlab/librostlab/trunk/debian/watch

[med-svn] r10208 - trunk/packages/rostlab/librostlab-blast/trunk/debian

2012-03-30 Thread Thorsten Alteholz
Author: alteholz Date: 2012-03-30 17:10:08 + (Fri, 30 Mar 2012) New Revision: 10208 Modified: trunk/packages/rostlab/librostlab-blast/trunk/debian/watch Log: make it accessible from more sites Modified: trunk/packages/rostlab/librostlab-blast/trunk/debian/watch

[med-svn] r10209 - trunk/packages/rostlab/librostlab-blast/trunk/debian

2012-03-30 Thread Thorsten Alteholz
Author: alteholz Date: 2012-03-30 17:10:49 + (Fri, 30 Mar 2012) New Revision: 10209 Modified: trunk/packages/rostlab/librostlab-blast/trunk/debian/copyright Log: we have versioned copyright now Modified: trunk/packages/rostlab/librostlab-blast/trunk/debian/copyright

[med-svn] r10210 - trunk/packages/rostlab/librg-blast-parser-perl/trunk/debian

2012-03-30 Thread Thorsten Alteholz
Author: alteholz Date: 2012-03-30 17:11:52 + (Fri, 30 Mar 2012) New Revision: 10210 Modified: trunk/packages/rostlab/librg-blast-parser-perl/trunk/debian/watch Log: make it accessible from more sites Modified: trunk/packages/rostlab/librg-blast-parser-perl/trunk/debian/watch

[med-svn] r10211 - trunk/packages/rostlab/librg-blast-parser-perl/trunk/debian

2012-03-30 Thread Thorsten Alteholz
Author: alteholz Date: 2012-03-30 17:12:05 + (Fri, 30 Mar 2012) New Revision: 10211 Modified: trunk/packages/rostlab/librg-blast-parser-perl/trunk/debian/copyright Log: we have versioned copyright now Modified: trunk/packages/rostlab/librg-blast-parser-perl/trunk/debian/copyright

[med-svn] r9989 - trunk/packages/gamgi/trunk

2012-03-13 Thread Thorsten Alteholz
Author: alteholz Date: 2012-03-13 18:35:13 + (Tue, 13 Mar 2012) New Revision: 9989 Removed: trunk/packages/gamgi/trunk/debian/ Log: this package has been captured by debichem long time ago ___ debian-med-commit mailing list

[med-svn] r9990 - trunk/packages/gamgi/trunk

2012-03-13 Thread Thorsten Alteholz
Author: alteholz Date: 2012-03-13 18:35:50 + (Tue, 13 Mar 2012) New Revision: 9990 Added: trunk/packages/gamgi/trunk/README.status Log: gone to DebiChem Added: trunk/packages/gamgi/trunk/README.status === ---

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