Bug#1010422: Bug#1011265: Britney fails to pin complete set in "Provides" api transitions [Was: Bug#1010422: transition: r-api-bioc-3.15]

2022-05-22 Thread Andreas Tille
Am Sun, May 22, 2022 at 07:43:35PM +0530 schrieb Nilesh Patra: > >I've just commited a patch thet ignores the not yet packaged test > >dependency which causes the test failure. In any case r-bioc-scater > > Then please make an upload.

Bug#1010422: Bug#1011265: Britney fails to pin complete set in "Provides" api transitions [Was: Bug#1010422: transition: r-api-bioc-3.15]

2022-05-22 Thread Nilesh Patra
On 22 May 2022 7:05:18 pm IST, Andreas Tille wrote: >Hi Graham, > >Am Sun, May 22, 2022 at 09:09:01AM +0200 schrieb Graham Inggs: >> It looks like the only blocker now is waiting for r-bioc-scater [1] to age: >> >> Too young, only 2 of 5 days old >> >> It doesn't get 2-day migration because

Bug#1010422: Bug#1011265: Britney fails to pin complete set in "Provides" api transitions [Was: Bug#1010422: transition: r-api-bioc-3.15]

2022-05-22 Thread Andreas Tille
Hi Graham, Am Sun, May 22, 2022 at 09:09:01AM +0200 schrieb Graham Inggs: > It looks like the only blocker now is waiting for r-bioc-scater [1] to age: > > Too young, only 2 of 5 days old > > It doesn't get 2-day migration because its autopkgtest regressed in > testing, sometime around

Bug#1010422: Bug#1011265: Britney fails to pin complete set in "Provides" api transitions [Was: Bug#1010422: transition: r-api-bioc-3.15]

2022-05-22 Thread Graham Inggs
Hi Nilesh It looks like the only blocker now is waiting for r-bioc-scater [1] to age: Too young, only 2 of 5 days old It doesn't get 2-day migration because its autopkgtest regressed in testing, sometime around 2021-09-23 [2]. I'll file a separate bug for that. Regards Graham [1]

Bug#1010422: Bug#1011265: Britney fails to pin complete set in "Provides" api transitions [Was: Bug#1010422: transition: r-api-bioc-3.15]

2022-05-21 Thread Graham Inggs
Hi Nilesh On Sat, 21 May 2022 at 07:03, Nilesh Patra wrote: It looks like britney has already figured these out: > r-bioc-annotationdbiset ignore for r-bioc-annotationhub (version in > unstable passes) > r-bioc-scran/beachmat Please run tests with new version of biocparallel

Bug#1010422: Bug#1011265: Britney fails to pin complete set in "Provides" api transitions [Was: Bug#1010422: transition: r-api-bioc-3.15]

2022-05-20 Thread Nilesh Patra
Hi Graham, I did some work to cleanup the rest stuff meanwhile, and need your help to ignore some of the CI temporarily to complete the migration; and also because unstable counterparts pass. I have pasted a list at the end of this email, please see to it. -- Best, Nilesh Package

Bug#1010422: Bug#1011265: Britney fails to pin complete set in "Provides" api transitions [Was: Bug#1010422: transition: r-api-bioc-3.15]

2022-05-19 Thread Graham Inggs
Hi On Thu, 19 May 2022 at 09:45, Paul Gevers wrote: > There's three package still waiting for an upload, r-bioc-progeny, > r-bioc-monocle and r-bioc-scater. When is the ETA for those? In addition, there is r-bioc-grohmm which I happened to notice dropped off the tracker during the transition.