Bug#735343: ITP: r-cran-polyclip -- GNU R Polygon Clipping

2014-01-14 Thread Andreas Tille
Package: wnpp Severity: wishlist Owner: Andreas Tille ti...@debian.org * Package name: r-cran-polyclip Version : 1.2-0 Upstream Author : Adrian Baddeley adrian.badde...@uwa.edu.au * URL : http://cran.r-project.org/web/packages/polyclip/ * License : Boost

Bug#735529: RM: cpushare -- ROM; dead upstream, not maintained, RC buggy

2014-01-16 Thread Andreas Tille
Package: ftp.debian.org Severity: normal Hi, I was inspecting packages of the pkg-scicomp team which is merged with Debian Science. I noticed that the package cpushare did not had uploads since 2008 nor changes in VCS since 2009-03-14 (which only added a watch file to a now not existing web

Pyfftw does not build

2014-02-10 Thread Andreas Tille
Hi Ghislain, pyfftw does not build in a pbuilder environment: ... removing '/home/andreas/debian-maintain/alioth/debian-science/git/packages/build-area/pyfftw-0.9.2/.pybuild/pythonX.Y_2.7/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it

Re: Bug#728085: Pyfftw does not build

2014-02-13 Thread Andreas Tille
Hi Ghislain, On Thu, Feb 13, 2014 at 08:33:08AM +, Ghislain Vaillant wrote: I too experience this error when using pbuilder. It builds fine however if I install the required dependencies on my machine and then run pbuilder. If any of them are missing, for instance the -dbg packages, then

Re: Bug#728085: Pyfftw does not build

2014-02-13 Thread Andreas Tille
Hi, On Thu, Feb 13, 2014 at 10:37:25AM +, Ghislain Vaillant wrote: I admit if I would have had a quick clue I would have provided it immediately. Despite I'm using pbuilder basically all the time I never experienced this problem ... most probably since I never added any *-dbg package

Re: Bug#728085: Pyfftw does not build

2014-02-14 Thread Andreas Tille
Hi Ghislain, thanks for your work on this. On Fri, Feb 14, 2014 at 09:45:08AM +, Ghislain Vaillant wrote: - Pbuilder now successfully runs, but you need python-numpy-dbg and python3-numpy-dbg to be installed before hand. Seems that pybuild calls python setup.py clean before dependency

New ompl fails to build from source

2014-02-28 Thread Andreas Tille
Hi Leopold, since I have trouble building ompl when I tried to sponsor it (see extract of build log below) in a pbuilder environment I think it really helps if you open an RFS bug where we could keep a record of this problem. Kind regards Andreas. ... cd

Re: Bug#728085: Pyfftw does not build

2014-03-12 Thread Andreas Tille
Hi Ghislain, On Sun, Mar 09, 2014 at 09:47:31PM +, Ghislain Vaillant wrote: The latest update of PyFFTW now builds nicely with pbuilder and is ready for review. All the previously reported issues are now fixed. Thanks for working on this. I can confirm that the package builds but I see

Re: Boost needs help

2014-03-12 Thread Andreas Tille
On Wed, Mar 12, 2014 at 03:06:03PM +0100, Leopold Palomo-Avellaneda wrote: Perfect, now ompl compiles. ... and uploaded. Kind regards Andreas. -- http://fam-tille.de -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org

Re: texmaker

2014-03-15 Thread Andreas Tille
Hi Julián, I generally prefer open discussion on mailing lists - in this case it is the maintainers mailing list and to keep other interested people informed (and no private content seems to be in this mail) I answer on list as well. On Fri, Mar 14, 2014 at 11:15:53AM -0500, Julián Moreno Patiño

Please privide pristine-tar branch

2014-03-16 Thread Andreas Tille
Hi Ghislain, I would like to sponsor ismrmrd but there are some issues with the packaging. 1. The pristine-tar branch is missing. Please use git import-orig --pristine-tar origtarball as it is explained in the team policy 2. Please set the Science team mailing list as

Re: pyfftw_0.9.2-1_amd64.changes REJECTED

2014-03-17 Thread Andreas Tille
Hi Ghislain, On Fri, Mar 14, 2014 at 09:13:14PM +, Ghislain Vaillant wrote: I am guessing that the licensing of the docs/html/* files come from the fact that it is built from sphinx. In that case what should be the license for it ? I think Thorsten was not primarily refering to the *.html

Re: Bug#732360: Please privide pristine-tar branch

2014-03-17 Thread Andreas Tille
Hi Ghislain, On Sun, Mar 16, 2014 at 09:11:12PM +, Ghislain Vaillant wrote: On Sun, 2014-03-16 at 21:04 +0100, Andreas Tille wrote: I would like to sponsor ismrmrd but there are some issues with the packaging. Thank you for stepping-up again to mentor one of my packages. Sure

Re: [sponsor needed] Simbody - Multibody dynamics API

2014-04-08 Thread Andreas Tille
Hi, On Tue, Apr 08, 2014 at 06:24:45AM +0200, Anton Gladky wrote: 3) Remove all binaries and do dfsg-tarball (*.dll, *.lib etc) I'd recommend using Files-Excluded in uscan of recent devscripts versions to approach this. Kind regards Andreas. -- http://fam-tille.de --

Re: [sponsor needed] Simbody - Multibody dynamics API

2014-04-09 Thread Andreas Tille
Hi, On Wed, Apr 09, 2014 at 08:05:52PM +0200, Anton Gladky wrote: 2014-04-08 8:34 GMT+02:00 Andreas Tille andr...@an3as.eu: I'd recommend using Files-Excluded in uscan of recent devscripts versions to approach this. Andreas, how to use it? If I just do uscan --force-download it does

Hi Mr. $DEBFULLNAME ; -) (Was: [pynac] branch master updated (ef09fed - e9f863b))

2014-04-10 Thread Andreas Tille
Hi Julien, it seems you did not properly setup your environment. It would help if you would commit with your real name. Kind regards and thanks for working on pynac Andreas. On Thu, Apr 10, 2014 at 02:41:18PM +, $DEBFULLNAME wrote: This is an automated email from the git

Re: Bug#732360: sponsorship status

2014-04-22 Thread Andreas Tille
Hi Ghislain, On Tue, Apr 22, 2014 at 01:16:13PM +0100, Ghislain Vaillant wrote: Are you still interested in sponsoring this package ? I have no specific wish to sponsor this package and if somebody else wants to step in I'd be more than happy. However, I just went the SoB route and uploaded to

Re: [sponsor needed] Update sdformat to version 2.0.0

2014-04-27 Thread Andreas Tille
Hi Jose, you are welcome to add a line to the table in the Sponsering of Blends Wiki https://wiki.debian.org/DebianPureBlends/SoB and I'll act as soon as possible. Kind regards Andreas. On Mon, Apr 28, 2014 at 02:05:57AM +0200, Jose Luis Rivero wrote: Hi all: I would need an

Bug#748347: r-cran-deldir: New upstream release available

2014-05-16 Thread Andreas Tille
Hi Santiago, thanks for your bug report. I really appreciate hints like this. I would also welcome if those people creating PPAs would rather file a bug report (or commit right to SVN and ping me for an upload). Santiago, it would help me adjusting my idea about maintaining R packages if you

Bug#748847: ITP: r-cran-expm -- GNU R Computation of the matrix exponential and related quantities

2014-05-21 Thread Andreas Tille
Package: wnpp Severity: wishlist Owner: Andreas Tille ti...@debian.org * Package name: r-cran-expm Version : 0.99-1.1 Upstream Author : Martin Maechler and others * URL : http://cran.r-project.org/web/packages/expm/ * License : GPL Programming Lang: R

Bug#752387: ITP: r-cran-gsl -- GNU R wrapper for the GNU Scientific Library

2014-06-23 Thread Andreas Tille
Package: wnpp Severity: wishlist Owner: Andreas Tille ti...@debian.org * Package name: r-cran-gsl Version : 1.9-10 Upstream Author : Robin K. S. Hankin hankin.ro...@gmail.com * URL : http://cran.r-project.org/web/packages/gsl/ * License : GPL Programming Lang

Bug#752396: ITP: r-cran-randomfields -- GNU R simulation and analysis of random fields

2014-06-23 Thread Andreas Tille
Package: wnpp Severity: wishlist Owner: Andreas Tille ti...@debian.org * Package name: r-cran-randomfields Version : 3.0.10 Upstream Author : Martin Schlather schlat...@math.uni-mannheim.de * URL : http://cran.r-project.org/web/packages/RandomFields/ * License

Bug#752502: ITP: r-cran-misctools -- GNU R miscellaneous tools and utilities

2014-06-24 Thread Andreas Tille
Package: wnpp Severity: wishlist Owner: Andreas Tille ti...@debian.org * Package name: r-cran-misctools Version : 0.6-16 Upstream Author : Arne Henningsen arne.henning...@gmail.com * URL : http://cran.r-project.org/web/packages/miscTools/ * License : GPL

Bug#752552: ITP: r-cran-learnbayes -- GNU R functions for learning bayesian inference

2014-06-24 Thread Andreas Tille
Package: wnpp Severity: wishlist Owner: Andreas Tille ti...@debian.org * Package name: r-cran-learnbayes Version : 2.15 Upstream Author : Jim Albert alb...@bgsu.edu * URL : http://cran.r-project.org/web/packages/LearnBayes/ * License : GPL Programming Lang: R

Bug#752771: ITP: r-cran-batchjobs -- GNU R batch computing

2014-06-26 Thread Andreas Tille
Package: wnpp Severity: wishlist Owner: Andreas Tille ti...@debian.org * Package name: r-cran-batchjobs Version : 1.2 Upstream Author : Bernd Bischl bernd_bis...@gmx.net * URL : http://cran.r-project.org/web/packages/BatchJobs/ * License : BSD Programming

Re: r-cran-randomfields_3.0.10-1_amd64.changes REJECTED

2014-06-26 Thread Andreas Tille
Hi Thorsten, reuploaded with fixed d/copyright. Please review. Thanks for your work as ftpmaster Andreas. On Thu, Jun 26, 2014 at 01:00:06PM +, Thorsten Alteholz wrote: Hi Andreas, unfortunately I have to reject your package. Please add the license of src/convhull2D.cc and

Bug#752876: ITP: r-cran-spdep -- GNU R spatial dependence: weighting schemes, statistics and models

2014-06-27 Thread Andreas Tille
Package: wnpp Severity: wishlist Owner: Andreas Tille ti...@debian.org * Package name: r-cran-spdep Version : 0.5-74 Upstream Author : Roger Bivand roger.biv...@nhh.no * URL : http://cran.r-project.org/web/packages/spdep/ * License : GPL Programming Lang: R

Re: [sponsor needed] Bump sdformat to 2.0.0-5

2014-07-02 Thread Andreas Tille
Hi Jose, I did some minor changes - please `git pull` - and uploaded afterwards. Thanks for your preparation Andreas. On Tue, Jul 01, 2014 at 05:05:52PM +0200, Jose Luis Rivero wrote: Hi all: I would need a sponsor to upload the revision 5 of sdformat where I'm trying to solve the

Re: octomap_1.6.6-1_amd64.changes REJECTED

2014-07-11 Thread Andreas Tille
Hi Leopold, On Sat, Jul 12, 2014 at 12:23:01AM +0200, Leopold Palomo-Avellaneda wrote: - I have not found any license file with GPLv2+ in upstream sources. Please, could you tell me which one? I have not tried but perhaps the script licensecheck from devscripts might help you spotting the

Bug#754661: findimagedupes: FTBFS: build-dependencies not satisfyable in sid

2014-07-14 Thread Andreas Tille
Hi Thorsten, (Gregor in CC) libinline-c-perl is in NEW - may be just waiting would help in this case? Gregor, what do you think? (BTW, feel free to NMU according to your opinion!) Kind regards Andreas. On Sun, Jul 13, 2014 at 10:25:10AM +, Thorsten Glaser wrote: Source:

Packaging coot for Debian

2014-07-15 Thread Andreas Tille
Hi, in beginning of February you injected an empty repository coot.git into Debian Med team Git. I might have forgotten whether you did some announcement about this but for the moment I see no point in keeping any empty repository in our space. Moreover there is some existing packaging at

Comments from ftpmaster regarding spdep Debian package

2014-07-30 Thread Andreas Tille
. - Forwarded message from Thorsten Alteholz ftpmas...@ftp-master.debian.org - Date: Wed, 30 Jul 2014 11:51:55 + From: Thorsten Alteholz ftpmas...@ftp-master.debian.org To: Debian Science Team debian-science-maintainers@lists.alioth.debian.org, Andreas Tille ti...@debian.org Cc: Debian FTP Masters

Re: Comments from ftpmaster regarding spdep Debian package

2014-07-30 Thread Andreas Tille
Hi Roger, thanks for your very fast response. I keep our ftpmaster in CC since he finally needs to decide. I attached a proposed diff for the debian/copyright file. On Wed, Jul 30, 2014 at 05:12:58PM +0200, Roger Bivand wrote: Hi Andreas, On Wed, 30 Jul 2014, Andreas Tille wrote: Hi

Re: Comments from ftpmaster regarding spdep Debian package

2014-07-30 Thread Andreas Tille
Hi Roger, On Wed, Jul 30, 2014 at 09:36:22PM +0200, Roger Bivand wrote: Hi Andreas, This isn't a patch to my spdep/inst/README file. No, it's not! :-) I have no knowledge of any debian/copyright file, and cannot take responsibility for that This was never intended - it was just for our

Re: Comments from ftpmaster regarding spdep Debian package

2014-07-31 Thread Andreas Tille
Hi Roger, I'm very astonished that this thread which started with two very simple questions exagerated to such a time consuming discussion. Since I read a lot of frustration in you mail and no chance to clarify things easily I just repeat the main point: inst/README says: File: src/soigraph.c

Re: Comments from ftpmaster regarding spdep Debian package

2014-07-31 Thread Andreas Tille
Hi Roger, On Thu, Jul 31, 2014 at 03:47:34PM +0200, Roger Bivand wrote: I'm very astonished that this thread which started with two very simple questions exagerated to such a time consuming discussion. Most questions are not as simple as they appear, think ontologies. Mine differs from

Re: Comments from ftpmaster regarding spdep Debian package

2014-07-31 Thread Andreas Tille
Hi Roger, On Thu, Jul 31, 2014 at 06:42:06PM +0200, Roger Bivand wrote: Hi Andreas, Given surveillance rather than my (wrong) guess, I'm willing to do what I can - I agree that actual use in epidemiology is worth facilitating. Should the soigraph issue prove problematic, I'll look at a

Re: Comments from ftpmaster regarding spdep Debian package

2014-08-01 Thread Andreas Tille
Hi Roger, On Fri, Aug 01, 2014 at 09:33:21AM +0200, Roger Bivand wrote: What is the r-cran-maptools issue - I'm also the maintainer of that package? I'm not aware of what might be non-free there; maybe the data files for examples and testing? Nobody has asked me about that. To explain this

Unit tests of msm are not passing fully

2014-08-08 Thread Andreas Tille
Hi Christopher, I try to upgrade the Debian package of msm to the latest version but failed tu run the according test suite: library(testthat) test_check(msm) Loading required package: msm analytic transition probability matrices : ... msm data

openigtlink packaging in SVN not in sync with package in Debian

2014-08-15 Thread Andreas Tille
Hi Dominique, the changelog in SVN says openigtlink (1.9.8~git20130725+bacab6f8b1-2) experimental; urgency=low openigtlink (1.9.2~svn7468-1) unstable; urgency=low but we have $ LANG=C apt-cache policy openigtlink-doc openigtlink-doc: Installed: (none) Candidate: 1.10.5-1 Version

Bug#758487: findimagedupes: speed improvements

2014-08-19 Thread Andreas Tille
Hi Alex, thanks for your patch. Just for your information: Upstream has orphaned this for years and Debian is de facto upstream. In this sense the tag upstream does not help a lot (but for sure you can become upstream ;-)). Anybody can feel free to team upload this nice enhancement. Kind

Bug#761564: cimg: FTBFS: fatal error: Magick++.h: No such file or directory

2014-09-15 Thread Andreas Tille
Hi David, I can confirm this problem. However, I have no idea why this happens. The critical point is a makefile containing # Flags to enable native support of most classical image file formats, using the Magick++ library. # ( http://www.imagemagick.org/Magick++/ ) CIMG_MAGICK_CFLAGS =

Re: Comments regarding r-cran-spdep_0.5-74-1_amd64.changes

2014-09-16 Thread Andreas Tille
Hi Thorsten, On Thu, Sep 11, 2014 at 12:50:48PM +, Thorsten Alteholz wrote: ping? pong? I was waiting on some comments in the thread starting at http://lists.alioth.debian.org/pipermail/debian-science-maintainers/2014-July/026476.html I have no idea what change you would accept for

Bug#759413: r-cran-learnbayes: Fail of tests in debci (autopkgtest)

2014-09-18 Thread Andreas Tille
Hi Lucas, I'm just idling with fixing this bug since your suggested solution does not fit, I can not reproduce the problem and you did not yet answered. Any news from your side? Kind regards Andreas. On Wed, Aug 27, 2014 at 03:44:00PM +0200, Andreas Tille wrote: Hi Lucas, On Wed

Bug#759413: r-cran-learnbayes: Fail of tests in debci (autopkgtest)

2014-09-23 Thread Andreas Tille
didn't work in this package after I sent you my patch, but I will try to restart my work to solve this bug when I have free time. Regards. On Thu, 18 Sep 2014 17:15:17 +0200 Andreas Tille andr...@an3as.eu wrote: Hi Lucas, I'm just idling with fixing this bug since your suggested

Bug#759413: r-cran-learnbayes: Fail of tests in debci (autopkgtest)

2014-09-24 Thread Andreas Tille
On Wed, Sep 24, 2014 at 03:12:36PM -0300, Lucas Kanashiro wrote: Andreas, You have to install debci via apt and execute setup command of debci, where debci will set up a schroot environment (follow the README). After the schroot was created, I downloaded the source of r-cran-learnbayes

Re: Comments regarding r-cran-spam_1.0-1-1_amd64.changes

2014-10-23 Thread Andreas Tille
Hi Thorsten, On Wed, Oct 22, 2014 at 08:07:05AM +, Thorsten Alteholz wrote: Hi Andreas, I marked your package for accept, but now you created this lintian warning: W: r-cran-spam source: unknown-paragraph-in-dep5-copyright paragraph at line 11 IMHO this is a false positive of lintian

Re: blitz++ did not yet build on mips

2014-10-27 Thread Andreas Tille
Hi, On Sun, Oct 26, 2014 at 09:51:48AM +0100, Andreas Barth wrote: * Andreas Tille (andr...@an3as.eu) [141026 08:04]: could you please have a look what might be wrong here: https://release.debian.org/migration/testing.pl?package=blitz++ You could check yourself via buildd.debian.org

Bug#767291: blitz++: FTBFS on mips

2014-10-30 Thread Andreas Tille
Hi Ivo, thanks for the bug report. On Wed, Oct 29, 2014 at 10:14:00PM +0100, Ivo De Decker wrote: package: blitz++ version: 1:0.10-2 severity: serious It seems the latest upload of blitz++ failed on mips, but it built fine before. This prevents migration to testing. I'm aware of this

Bug#767291: blitz++: FTBFS on mips

2014-10-30 Thread Andreas Tille
). Duration of array test execution on cavium board is: 304m40.451s. On broadcom board, package builds successfully. Duration of array test execution on broadcom board is: 12m50.570s. Best Regards, Dejna From: Andreas Tille [andr

Bug#767919: unblock: viewmol/2.4.1-21

2014-11-03 Thread Andreas Tille
/changelog +++ viewmol-2.4.1/debian/changelog @@ -1,3 +1,12 @@ +viewmol (2.4.1-21) unstable; urgency=medium + + * Team upload. + * Create executable on all architectures (Thanks for the patch to +Graham Inggs gra...@nerve.org.za) +Closes: #763909 + + -- Andreas Tille ti...@debian.org Mon, 03

Bug#763909: viewmol: /usr/bin/viewmol missing for most archs

2014-11-03 Thread Andreas Tille
Hi Graham, it would be great if you could revise the patch. I admit that the package is in a quite outdated packaging state. :-( Just ping me if you found a better solution and I'll do my best to upload quickly. Kind regards Andreas. On Mon, Nov 03, 2014 at 09:30:59PM +0200, Graham

Bug#763909: Bug#767919: unblock: viewmol/2.4.1-21

2014-11-03 Thread Andreas Tille
target does not work with your patch. Do you see a chance to skip the getmachine call in the clean target which should be sufficient to work around the problem? Kind regards Andreas. On Tue, Nov 04, 2014 at 07:14:27AM +0100, Niels Thykier wrote: On 2014-11-04 06:41, Andreas Tille wrote

Bug#763909: Bug#767919: unblock: viewmol/2.4.1-21

2014-11-04 Thread Andreas Tille
Hi Graham, On Tue, Nov 04, 2014 at 02:41:27PM +0200, Graham Inggs wrote: Hi Andreas So far, I haven't been able to get the package to build at all without switching to source format 3.0. Well, I personally do not agree with the set freeze rules but we need to follow if we want to see

Bug#763909: Bug#767919: unblock: viewmol/2.4.1-21

2014-11-05 Thread Andreas Tille
[CCing DebiChem since viewmol might be in the interest of this team. I'd consider moving the package from Debian Science to DebiChem for Jessie+1.] Hi Graham, On Wed, Nov 05, 2014 at 11:16:30AM +0200, Graham Inggs wrote: Some progress. I pre-applied

Bug#763909: Bug#767919: unblock: viewmol/2.4.1-21

2014-11-05 Thread Andreas Tille
Hi Graham, On Wed, Nov 05, 2014 at 12:54:48PM +0200, Graham Inggs wrote: On 05/11/2014 11:40, Andreas Tille wrote: To bad that we stumbled to late about this problem to block the way more simple solution sith source format and debhelper. :-) Yeah, that would have been simpler. Running

Re: vtk6 and #773424

2015-01-16 Thread Andreas Tille
Hi Anton, besides this I wonder whether we could / should / are able to get libvtk6-java back since the removal in #773422 was no solution everybody is happy about. Did you tried consulting debian-java list (and if not would you be interested if somebody else would try?) I'm tempted to reopen

Re: Bug#733910: ITP: ckon -- automatic build tool for ROOT analyses

2015-01-25 Thread Andreas Tille
:11:03 AM, Andreas Tille (andr...@an3as.eu) wrote: On Sat, Jan 04, 2014 at 04:59:04AM -0800, Patrick Huck wrote: Hi Andreas, With Alioth being back up again, I requested membership in the Debian Science Team but am still waiting for a reply. Meanwhile, I got 'ckon' compiled

Re: nifti2dicom in debian-science metapackage

2015-02-09 Thread Andreas Tille
Hi, On Sun, Feb 08, 2015 at 09:28:50PM +0100, Sébastien Villemot wrote: Dear Daniele, Le vendredi 16 janvier 2015 à 16:18 +0100, Daniele E. Domenichelli a écrit : I'm sorry if this is the wrong place, but I don't know the what is the policy for this kind of request... I would like

Re: Upload

2015-03-21 Thread Andreas Tille
Hi Anton, On Sat, Mar 21, 2015 at 11:01:59AM +0100, Anton Gladky wrote: onwer 588340 ! retitle 588340 ITP: sfepy -- Simple finite elements in Python thanks The package will soon be uploaded under Debian Science team. Cool. Please note that it is not yet mentioned in the Debian Science

Re: Need help to upload dolfin

2015-03-21 Thread Andreas Tille
Hi Johannes, feel free to add a row at bottom of the SoB page: https://wiki.debian.org/DebianPureBlends/SoB Note, that I'll be mostly offline until tomorrow evening - I'm fine if somebody beats me in uploading. Kind regards Andreas. On Fri, Mar 20, 2015 at 01:12:41PM +0100,

Bug#728777: libcolt-free-java

2015-03-31 Thread Andreas Tille
Hi Anton, just a hint: We now have libcolt-free-java in main which is libcolt-java with stripped of non-free code. The Debian Med reverse depends are building fine and hopefully are running fine (needs testing in practice). May be this is helpful for sumo as well. Kind regards

Bug#781477: unblock: debian-science/1.4

2015-03-29 Thread Andreas Tille
Package: release.debian.org Severity: normal User: release.debian@packages.debian.org Usertags: unblock Please unblock package debian-science According to previous discussion about Blends metapackages[1] I'd like you to unblock debian-science 1.4. I simply rerendered the status of the

Re: limereg_1.3.1-1_amd64.changes REJECTED

2015-04-23 Thread Andreas Tille
On Wed, Apr 22, 2015 at 11:56:13PM +0200, Roelof Berg wrote: Thanks Andreas, I will check if this works for me as final acceptance test. I wonder about the state of limereg. After I fixed the reason for the rejection, which you kindly offered to accept some days ago, thanks, I saw neither an

Re: limereg_1.3.1-1_amd64.changes REJECTED

2015-04-22 Thread Andreas Tille
: Thanks, Andreas, for being so enthusiast and helpful. Maybe my setup is to new (SID). Would it be allowed to git-package in my home-folder on Alioth ? I assume, then I'd have a more compatible setup (?) Von meinem Mobiltelefon gesendet. Am 16.04.2015 um 08:47 schrieb Andreas Tille andr

Re: Poly/ML

2015-04-22 Thread Andreas Tille
Hi Alex, On Wed, Apr 22, 2015 at 11:34:31AM +0100, Alex Coplan wrote: I’m not sure if this is the right place to be asking, but if someone could at least point me in the right direction that would be great. I would like to suggest an update to the Poly/ML package

Missing files in libjhdf5-java (Was: Help needed to update to latest fastqc)

2015-05-05 Thread Andreas Tille
...@irisa.fr - Date: Tue, 05 May 2015 09:25:23 +0200 From: Olivier Sallou olivier.sal...@irisa.fr To: debian-...@lists.debian.org Subject: Re: Help needed to update to latest fastqc On 05/04/2015 10:52 PM, Andreas Tille wrote: Hi Olivier, On Mon, May 04, 2015 at 06:41:10PM +0200, Olivier Sallou

Re: limereg_1.3.1-1_amd64.changes REJECTED

2015-04-16 Thread Andreas Tille
Hi Roelof, On Thu, Apr 16, 2015 at 12:06:14AM +0200, Roelof Berg wrote: I fixed below mentioned issue in: ssh://rberg-gu...@git.debian.org/git/debian-science/packages/limereg.git Fine. I'm rebuilding while writing this mail. Though I read a lot of documents about Debian packaging, the

Re: Uploaded Limereg V1.4.0

2015-06-25 Thread Andreas Tille
Hi, On Thu, Jun 25, 2015 at 01:15:03PM +0200, Roelof Berg wrote: would anyone want to sponsor Limereg V1.4.0 ? That'd be awesome. It's on alioth at Done. Sorry for the SoB-delay. I'm catching up slowly from vacation. Other SoB candidates might keep on pinging me in urgent cases. Thanks for

Bug#790196: Please help porting rasmol to latest vte (Was: Bug#790196: rasmol: depends on vte which is deprecated)

2015-07-03 Thread Andreas Tille
Hi, I had a look into the said issue but failed with ... No package 'vte' found Package vte was not found in the pkg-config search path. Perhaps you should add the directory containing `vte.pc' to the PKG_CONFIG_PATH environment variable No package 'vte' found ... When looking at the upstream

Bug#791399: [cimg] Non free image lenna

2015-07-04 Thread Andreas Tille
Hi David, On Sat, Jul 04, 2015 at 09:18:43PM +0200, David Tschumperlé wrote: There are other images distributed within the CImg packages that are not free but also distributable, so I'm a bit surprised the bug report focuses only on the Lena image. I guess the only reason why the bug report

Bug#791399: [cimg] Non free image lenna

2015-07-05 Thread Andreas Tille
Hi again, On Sun, Jul 05, 2015 at 12:11:20AM +0200, David Tschumperlé wrote: Would you consider a free license for these images? Of course, pick the license you want for these. CeCILL-C is probably fine. Thanks. From a Debian point of view we are not allowed to include non-free

Bug#791399: [cimg] Non free image lenna

2015-07-04 Thread Andreas Tille
Hi Bastien, thanks for this bug report, which I'm hereby forwarding upstream. David, do you have any acceptable free replacement which works similarly good as example? Kind regards Andreas. On Sat, Jul 04, 2015 at 01:32:17PM +0200, Bastien ROUCARIES wrote: Package: src:cimg Severity:

Bug#792624: Bugfix uploaded, but the package remains on the old verison ?

2015-08-22 Thread Andreas Tille
Roelof, On Sat, Aug 22, 2015 at 09:38:12AM +0200, David Bremner wrote: Roelof Berg rb...@berg-solutions.de writes: Hi, this is about the third or fourth time I'm asking this. Any help would be greatly aprechiated. I uploaded a new version 1.4.0-2 of limereg that fixes #792624 and

Re: Wheezy backport of nlopt

2015-07-28 Thread Andreas Tille
On Tue, Jul 28, 2015 at 11:42:19AM +0100, Sandro Tosi wrote: On Tue, Jul 28, 2015 at 11:36 AM, Sergey B Kirpichev skirpic...@gmail.com wrote: On Tue, Jul 28, 2015 at 09:55:47AM +0100, Sandro Tosi wrote: Do I have access to it? Any member of debian-science group has. $ ssh

mathicgb build failed

2015-07-18 Thread Andreas Tille
Hi Doug, I think you need to update the symbols file (or remove it at all - I personally do not provide symbols files in my library packages since it makes maintainance hard). I attached the relevant part of the build log. Kind regards Andreas. -- http://fam-tille.de dh_makeshlibs

Re: Open-sourced: OpenCL-based multiphysics simulation software package

2015-07-08 Thread Andreas Tille
Hi Zeev, I was on vacation and thus did not responded soonish. Since I can not find any response on this list to your mail (which I consider unusual, but anyway) I would like to ask whether you might have been able to make some progress anyway. See inline for more comments. On Fri, Jun 05,

Re: Open-sourced: OpenCL-based multiphysics simulation software package

2015-07-08 Thread Andreas Tille
Hi Zeev, On Wed, Jul 08, 2015 at 09:46:04PM +0300, Zeev Pekar wrote: So you responded just in time :) :-) By now one can generate a basic .deb package running `cpack -G DEB` - a good starting point probably. I don't know cpack and I'm afraid this will not really help to get an official

Re: Open-sourced: OpenCL-based multiphysics simulation software package

2015-07-09 Thread Andreas Tille
On Thu, Jul 09, 2015 at 09:03:36AM +0300, Zeev Pekar wrote: cpack is part of Kitware's cmake. It will not create an official Debian package, but at least some initial files to start with... OK, having some initial files might help. I'm there

Bug#790984: blitz++: library transition may be needed when GCC 5 is the default

2015-09-10 Thread Andreas Tille
nd some examples in /usr/share/doc/libblitz-doc/examples. > -There is a Makefile.examples to build and test all examples. > - > -The benchmark directory has not been installed here, because it > -tests blitz++ against FORTRAN 90, which is not available for debian. > - > -Pa

Bug#792625: Bug#792624: Bugfix uploaded, but the package remains on the old verison ?

2015-09-23 Thread Andreas Tille
Hi Roelof, On Tue, Sep 22, 2015 at 11:36:38PM +0200, Roelof Berg wrote: > On 22.08.2015 15:12, Andreas Tille wrote: > >Roelof, > > > [...] > >Just add a proper > > > >Closes: #792624, #792625 > > > >line in your changelog entry. > Fixed

xmds-doc to Debian Science maintenance or ROM?

2015-12-03 Thread Andreas Tille
Hi, by chance I found out that there is only one remaining package maintained by pkg-scicomp (or rather not maintained since the team is declared dead and the repository readonly). Christian, would you mind uploading it under Debian Science or ask for removal if the package is not needed any

Bug#798963: Could you explain the showstopper for libvtk-java

2015-12-05 Thread Andreas Tille
Hi, some packages in Debian Med depend from libvtk-java version 6.x. Is there any chance to get libvtk-java back and how can I help with this? Kind regards Andreas. -- http://fam-tille.de -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org

Bug#808848: RM: xmds-doc -- ROM; Unmaintained, outdated

2015-12-23 Thread Andreas Tille
Package: ftp.debian.org Severity: normal As announced on Debian Science list[1] I hereby request the removal of the last package of a team that does not exist any more (Debian Scientific Computing) since it was merged to Debian Science. This last package obviously did not found any maintainer

Bug#737325: Should't this bug be closed

2015-12-18 Thread Andreas Tille
Hi, the Python module was moved to python-vtk6 and the Java support removed from the package (unfortunately - that's why I stumbled upon this bug). So the topic of this bug is done IMHO. Shouldn't this bug be closed then? Kind regards Andreas. -- http://fam-tille.de --

Status of vmtk

2015-12-18 Thread Andreas Tille
Hi Johannes, when checking reverse dependencies of insighttoolkit3 and vtk5 I stumbled upon vmtk. I noticed that the project moved to Github and has a new version. Unfortunately it seems there was no switch to insighttoolkit4 and vtk6 (and it also needs vtkjava which is not (yet) available in

Bug#751111: Should't this bug be closed

2015-12-18 Thread Andreas Tille
Hi, the Python module was moved to python-vtk6 and the Java support removed from the package (unfortunately - that's why I stumbled upon this bug) and there is also no tcltk package any more. So the topic of this bug is done IMHO. Shouldn't this bug be closed then? Kind regards

Re: vtk6 and #773424

2015-12-19 Thread Andreas Tille
team. What do you think? Kind regards Andreas. On Fri, Jan 16, 2015 at 10:44:03AM +0100, Andreas Tille wrote: > Hi Anton, > > besides this I wonder whether we could / should / are able to get > libvtk6-java back since the removal in #773422 was no solution > everybody is ha

Bug#805829: r-cran-gsl: Fails to build with GSL 2

2015-11-24 Thread Andreas Tille
Hi Bas, thanks for working on the libgsl migration. I commited a patch to SVN[1] to circumvent the check by configure but that's not sufficient to do the migration. The build fails with gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I/usr/include -I. -fpic -g -O2

Bug#803755: texmaker: diff for NMU version 4.4.1-1.1

2015-11-24 Thread Andreas Tille
Hi Andreas, thanks a lot for caring! Would you mind commiting your changes to Debian Science svn. It has ACLs set to grant commit permissions to any DD. Thanks again Andreas. On Sun, Nov 22, 2015 at 07:49:47PM +0100, Andreas Bombe wrote: > Control: tags 803755 + patch > Control: tags

Re: normaliz_3.0.0+ds-2_amd64.changes REJECTED

2015-11-22 Thread Andreas Tille
On Sun, Nov 22, 2015 at 06:04:23AM +0100, Jerome BENOIT wrote: > > I've just run your get-orig-source rule and ended up with a 3rd > > version of the orig.tar.xz. > > I guess re-compressing with uscan is not reproducible (yet?). > > It appeared that tar does not produced reproducible balls.

Bug#809691: Would you volunteer to take over the maintenance under my sponsorship

2016-01-12 Thread Andreas Tille
Hi Oliver, it seems Bastien has lost interest in this package. It just popped up in my sentinel of packages that are in the focus of Debian Med but not uploaded for a long time. If you have no idea how to maintain a package I'd consider a "Mentoring of the Month"[1] for Debian Science. Kind

Please accept vtk6

2016-01-12 Thread Andreas Tille
Hi ftpmasters, vtk6[1] is no new package. It has just a new binary package. Since vtk6 is quite complex and we need a lot of testing of its dependencies we are even now short in time for the Jessie freeze. It would help a lot if you could accept it for unstable. Thanks a lot for your

Bug#809691: Would you volunteer to take over the maintenance under my sponsorship

2016-01-12 Thread Andreas Tille
Hi Bastien, On Tue, Jan 12, 2016 at 03:58:15PM +0100, roucaries bastien wrote: > > it seems Bastien has lost interest in this package. It just popped up > > in my sentinel of packages that are in the focus of Debian Med but not > > uploaded for a long time. If you have no idea how to maintain a

Bug#826861: ITP: r-cran-mlbench -- GNU R Machine Learning Benchmark Problems

2016-06-09 Thread Andreas Tille
Package: wnpp Severity: wishlist Owner: Andreas Tille <ti...@debian.org> * Package name: r-cran-mlbench Version : 2.1-1 Upstream Author : Friedrich Leisch <friedrich.lei...@r-project.org> * URL : http://cran.r-project.org/web/packages/mlbench/ * License

Bug#826850: ITP: r-cran-mlmrev -- GNU R Examples from Multilevel Modelling Software Review

2016-06-09 Thread Andreas Tille
Package: wnpp Severity: wishlist Owner: Andreas Tille <ti...@debian.org> * Package name: r-cran-mlmrev Version : 1.0-6 Upstream Author : Steve Walker <steve.wal...@utoronto.ca> * URL : http://cran.r-project.org/web/packages/mlmRev/ * License : GPL

Re: Fwd: PDL package update request (who is appropriate POC?)

2016-05-28 Thread Andreas Tille
Hi Chris, On Sat, May 28, 2016 at 02:31:40PM -0400, Chris Marshall wrote: > I saw that you have had activity with the Debian pdl packaging > from 15 Jan 2016. I'm hoping to update the pdl package from > the current version PDL-2.007 to the soon to be released > PDL-2.016. > > PDL-2.007 is more

Could Debian Perl team take over PDL? (Was: Fwd: PDL package update request (who is appropriate POC?))

2016-05-30 Thread Andreas Tille
gt; things if you could find an experienced Debian > science maintainer to try things out. I don't want > to blindly start editing without knowing how things > work. If we can get the process bootstrapped, I can > see about finding a new maintainer (maybe me if I can > install a

Bug#825538: ITP: clapack -- Basic Linear Algebra Reference implementations library

2016-05-27 Thread Andreas Tille
Package: wnpp Severity: wishlist Owner: Andreas Tille <ti...@debian.org> * Package name: clapack Version : 3.2.1 Upstream Author : The University of Tennessee * URL : http://www.netlib.org/clapack/ * License : BSD Programming Lang: C Description :

Re: r-cran-spdep_0.6-4-1_amd64.changes REJECTED

2016-06-02 Thread Andreas Tille
Hi Roger, thanks for the information. I've uploaded the changes to the Debian new queue. Kind regards Andreas. On Tue, May 31, 2016 at 08:43:24PM +0200, Roger Bivand wrote: > Hi Andreas, > > spdep_0.6-5 submitted to CRAN. > > Roger > > > On Tue, 31 May 2

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