> On 14.02.2017, at 17:35, David Kincaid wrote:
>
> I see there is a new release of UIMA in the works and it's labeled as
> 3.0.0. That jump seems to imply significant changes/updates. Is anyone in
> the ctakes community close enough to the UIMA project to know if there is
> anything beneficial t
Hi Jessica,
Many thanks for the link!
All: I kind of blew through the intro. It looks like there are some great
improvements in 3.0. On first glance - pojo FS; Tonic!
However, _Type access can throw Unsupported Exceptions depending upon access.
I'm pretty sure that we've got some usage lur
Fantastic! Thank you!
As we RMs get things organized re: testing tasks, etc. we will keep everybody
posted. Everybody can volunteer for whatever testing workflow, etc. has their
interest.
Sean
-Original Message-
From: David Kincaid [mailto:kincaid.d...@gmail.com]
Sent: Tuesday, Febr
Here's a link to the user's guide with the overview, changes, etc.
http://uima.apache.org/d/uimaj-3.0.0-alpha/version_3_users_guide.html
On Tue, Feb 14, 2017 at 12:12 PM, David Kincaid
wrote:
> Trello board seems like a good enough idea. I'm willing to help out with
> some testing too.
>
> - Da
Trello board seems like a good enough idea. I'm willing to help out with
some testing too.
- Dave
On Tue, Feb 14, 2017 at 11:01 AM, Finan, Sean <
sean.fi...@childrens.harvard.edu> wrote:
> Hi Dave,
>
> I haven't tried it. I don't even know what major changes there may be ...
> Does anybody out
Hi Dave,
I haven't tried it. I don't even know what major changes there may be ... Does
anybody out there know? It would be great to test this before the upcoming
ctakes release to see if ctakes is fully compatible ...
Man oh man, we have a lot of testing to do before the release ... any help
I see there is a new release of UIMA in the works and it's labeled as
3.0.0. That jump seems to imply significant changes/updates. Is anyone in
the ctakes community close enough to the UIMA project to know if there is
anything beneficial to ctakes in there? Has anyone been bold enough to try
ctakes
I have updated the LVG version to 2017 but still i get error when using
multi threading... (Investigating but not able to find anything)
Do you have any insights regarding that.
On Tue, Feb 14, 2017 at 8:26 PM, Finan, Sean <
sean.fi...@childrens.harvard.edu> wrote:
> Hi Tim,
>
> Definitely not
Alaa,
Have you actually tested and noticed a serious time problem? Any given cas
will probably not have enough concepts stored to make this an issue.
Sean
-Original Message-
From: shahid ashraf [mailto:sha...@trialx.com]
Sent: Tuesday, February 14, 2017 9:56 AM
To: cTakes developers lis
Hi Tim,
Definitely not a dumb idea. I think that this possibility and others have been
posted: no lvg, single-thread, uima-as, multiple jvms, wrapping the current lvg
annotator in a singleton and then making a new lvg annotator that makes
synchronized calls to that singleton ...
I think that
hi
What i can suggest is in your web app you initialize both pipelines and
based on request e.g ic9 call the process method of the same .. or
viceversa. (It can be memory intensive...)
P.S: ... this is sort of hack
On Tue, Feb 14, 2017 at 8:12 PM, Alaa al Barari
wrote:
> not really i want thi
not really i want this in dynamic manner, sometimes I need icd9 and other
times I need 10. if there is a way to specify exactly which scheme it
should work with.
like I have a webservice that sometimes it should return icd9 and other
times icd10 based on the request. modifying the xml wont do the
My understanding is that it is our dependency on a somewhat outdated
version of LVG that makes it non-thread-safe. So we can update the
dependency, but in the meantime if Alaa removes LVG from the pipeline
will that be threadsafe? Alaa, if no one else weighs in to tell you
this idea is stupid it mi
Hi all,
I want to be able to parse multiple documents at the same time. one member
here suggested below code :
mAnalysisEngine = UIMAFramework.produceAnalysisEngine(specifier,3,0);
//create CAS pool with 3 CAS instances
jCasPool = new JCasPool(3, pipeline);
My problem is with the fir
Thanks for your answer!
Do you want ctakes to never find codes from certain schemes during
processing? yes exactly this is what I am shooting for, if I dont need
them at the moment I dont want them found. suppose I have icd10 and icd9, I
want it to not find icd9 when I am looking for 10 and nice
Go into resources/org/apache/ctakes/dictionary/lookup/fast/ and edit your xml
configuration file. Comment out the 2 lines that have icd9 listed as desired
schemes. That should do it.
The configuration file basically tells ctakes what is in your dictionary
database. If you comment those lines
Hi Alaa,
I have a question for you. Do you want ctakes to never find codes from certain
schemes during processing? Or do you want it to find them, but only return
them when you request them explicitly after processing?
> can I override process(final JCas jcas)
That depends. If you are subcla
One more question please whats the difference between cas and jcas ?
On Tue, Feb 14, 2017 at 1:39 PM, Alaa al Barari
wrote:
> Thanks Shahid, basically I built a web service, that calls ctakes, the
> issue is when 2 users call the service in parallel, ctakes cant handle both
> of them because its
Thanks Shahid, basically I built a web service, that calls ctakes, the
issue is when 2 users call the service in parallel, ctakes cant handle both
of them because its not thread safe. any idea how to do that ?
regarding performance, how can I enhance it you have steps ? I am using
below code whic
Hi Alaa
What is your use case, I assumed you need to increase performance of ctakes
by leveraging multiple threads. In that case we can use UIMA CASPOOL which
allows us to process ctakes via multiple threads.
P.S. Ctakes is based on UIMA architecture.
https://uima.apache.org/documentation.html
guys, anyone please through some light on this ? if there is something to
be done or away I can do this ?
On Sun, Feb 12, 2017 at 6:56 PM, Alaa al Barari
wrote:
> what is UIMA can you give more information about it, and how it can
> benefit me ?
>
> Thanks in advance/
>
> On Sun, Feb 12, 2017 at
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