[jira] [Created] (UIMA-4917) xmi and xcas serialization of Arrays of specific FS types fails

2016-05-04 Thread Marshall Schor (JIRA)
Marshall Schor created UIMA-4917: Summary: xmi and xcas serialization of Arrays of specific FS types fails Key: UIMA-4917 URL: https://issues.apache.org/jira/browse/UIMA-4917 Project: UIMA I

[jira] [Resolved] (UIMA-4915) NullPointerException in CasSerializerSupport when called from JsonCasSerializer and features reference the cas:NULL element

2016-05-04 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4915?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor resolved UIMA-4915. -- Resolution: Fixed Assignee: Marshall Schor Fix Version/s: 2.8.2SDK > NullPointerE

[jira] [Updated] (UIMA-4915) NullPointerException in CasSerializerSupport when called from JsonCasSerializer and features reference the cas:NULL element

2016-05-05 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4915?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor updated UIMA-4915: - Fix Version/s: 3.0.0SDKexp > NullPointerException in CasSerializerSupport when called from > JsonC

[jira] [Commented] (UIMA-4914) Annotation Viewer StackOverflowError

2016-05-05 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4914?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15272931#comment-15272931 ] Marshall Schor commented on UIMA-4914: -- I think this is the same error as UIMA-4863, w

[jira] [Closed] (UIMA-4914) Annotation Viewer StackOverflowError

2016-05-05 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4914?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor closed UIMA-4914. Resolution: Duplicate > Annotation Viewer StackOverflowError > >

[jira] [Created] (UIMA-4920) fix a quirk in cas copier used for copy view then for individual FS copy

2016-05-05 Thread Marshall Schor (JIRA)
Marshall Schor created UIMA-4920: Summary: fix a quirk in cas copier used for copy view then for individual FS copy Key: UIMA-4920 URL: https://issues.apache.org/jira/browse/UIMA-4920 Project: UIMA

[jira] [Created] (UIMA-4932) improve error message when sofa missing during add to indexes

2016-05-13 Thread Marshall Schor (JIRA)
Marshall Schor created UIMA-4932: Summary: improve error message when sofa missing during add to indexes Key: UIMA-4932 URL: https://issues.apache.org/jira/browse/UIMA-4932 Project: UIMA Iss

[jira] [Resolved] (UIMA-4932) improve error message when sofa missing during add to indexes

2016-05-13 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4932?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor resolved UIMA-4932. -- Resolution: Fixed > improve error message when sofa missing during add to indexes > -

[jira] [Created] (UIMA-4945) regenerate serialize form 4 for SerDesTest4 for V3

2016-05-25 Thread Marshall Schor (JIRA)
Marshall Schor created UIMA-4945: Summary: regenerate serialize form 4 for SerDesTest4 for V3 Key: UIMA-4945 URL: https://issues.apache.org/jira/browse/UIMA-4945 Project: UIMA Issue Type: Tas

[jira] [Created] (UIMA-4980) add constructors for Builtin Feature Structure lists that take value and maybe the next ptr

2016-06-16 Thread Marshall Schor (JIRA)
Marshall Schor created UIMA-4980: Summary: add constructors for Builtin Feature Structure lists that take value and maybe the next ptr Key: UIMA-4980 URL: https://issues.apache.org/jira/browse/UIMA-4980

[jira] [Resolved] (UIMA-4980) add constructors for Builtin Feature Structure lists that take value and maybe the next ptr

2016-06-16 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4980?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor resolved UIMA-4980. -- Resolution: Fixed > add constructors for Builtin Feature Structure lists that take value and > m

[jira] [Commented] (UIMA-4988) UIMA plugins fail to install on Eclipse NEON

2016-06-23 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4988?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15346397#comment-15346397 ] Marshall Schor commented on UIMA-4988: -- just confirmed this issue in my default setup

[jira] [Commented] (UIMA-4988) UIMA plugins fail to install on Eclipse NEON

2016-06-23 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4988?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15346403#comment-15346403 ] Marshall Schor commented on UIMA-4988: -- others are having this issue. see https://bu

[jira] [Commented] (UIMA-4988) UIMA plugins fail to install on Eclipse NEON

2016-06-23 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4988?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15346433#comment-15346433 ] Marshall Schor commented on UIMA-4988: -- posted a question on workarounds for this to S

[jira] [Created] (UIMA-4991) eliminate need for shared data parameter in xmi serialization

2016-06-27 Thread Marshall Schor (JIRA)
Marshall Schor created UIMA-4991: Summary: eliminate need for shared data parameter in xmi serialization Key: UIMA-4991 URL: https://issues.apache.org/jira/browse/UIMA-4991 Project: UIMA Iss

[jira] [Commented] (UIMA-4988) UIMA plugins fail to install on Eclipse NEON

2016-06-30 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4988?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15357223#comment-15357223 ] Marshall Schor commented on UIMA-4988: -- I tried the suggestion on Stackoverflow of "ju

[jira] [Commented] (UIMA-4988) UIMA plugins fail to install on Eclipse NEON

2016-07-11 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4988?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15370690#comment-15370690 ] Marshall Schor commented on UIMA-4988: -- Am starting to work on this > UIMA plugins fa

[jira] [Work started] (UIMA-4988) UIMA plugins fail to install on Eclipse NEON

2016-07-11 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4988?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Work on UIMA-4988 started by Marshall Schor. > UIMA plugins fail to install on Eclipse NEON > -

[jira] [Commented] (UIMA-4988) UIMA plugins fail to install on Eclipse NEON

2016-07-11 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4988?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15372128#comment-15372128 ] Marshall Schor commented on UIMA-4988: -- Got the component descriptor editor working wi

[jira] [Commented] (UIMA-4988) UIMA plugins fail to install on Eclipse NEON

2016-07-12 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4988?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15373477#comment-15373477 ] Marshall Schor commented on UIMA-4988: -- Install into Neon JEE showed no errors, but JC

[jira] [Comment Edited] (UIMA-4988) UIMA plugins fail to install on Eclipse NEON

2016-07-12 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4988?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15373477#comment-15373477 ] Marshall Schor edited comment on UIMA-4988 at 7/12/16 7:05 PM: --

[jira] [Commented] (UIMA-4988) UIMA plugins fail to install on Eclipse NEON

2016-07-13 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4988?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15376207#comment-15376207 ] Marshall Schor commented on UIMA-4988: -- The first error was caused by a strange config

[jira] [Resolved] (UIMA-4988) UIMA plugins fail to install on Eclipse NEON

2016-07-14 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4988?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor resolved UIMA-4988. -- Resolution: Fixed Fix Version/s: (was: 2.8.1SDK) (was: 2.8.1AS)

[jira] [Resolved] (UIMA-4721) Nested protect blocks not adding back in all cases

2016-07-14 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4721?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor resolved UIMA-4721. -- Resolution: Fixed is also fixed in 3.0.0SDKexp > Nested protect blocks not adding back in all ca

[jira] [Resolved] (UIMA-4920) fix a quirk in cas copier used for copy view then for individual FS copy

2016-07-14 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4920?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor resolved UIMA-4920. -- Resolution: Fixed Fix Version/s: (was: 2.8.2SDK) This is a very minor change, and not

[jira] [Resolved] (UIMA-4897) uimaj debug and trace improvements

2016-07-14 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4897?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor resolved UIMA-4897. -- Resolution: Fixed Added to the CASImpl method - to use, you have to recompile the CASImpl method

[jira] [Resolved] (UIMA-4823) Missing error reports for mismatch between JCas and UIMA Type system

2016-07-14 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4823?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor resolved UIMA-4823. -- Resolution: Fixed > Missing error reports for mismatch between JCas and UIMA Type system > --

[jira] [Commented] (UIMA-4823) Missing error reports for mismatch between JCas and UIMA Type system

2016-07-14 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4823?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15378075#comment-15378075 ] Marshall Schor commented on UIMA-4823: -- change set 1733947 > Missing error reports f

[jira] [Commented] (UIMA-4786) uima-core test case copy/paste bug

2016-07-14 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4786?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15378083#comment-15378083 ] Marshall Schor commented on UIMA-4786: -- change set 1752671 > uima-core test case copy

[jira] [Comment Edited] (UIMA-4786) uima-core test case copy/paste bug

2016-07-14 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4786?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15378083#comment-15378083 ] Marshall Schor edited comment on UIMA-4786 at 7/14/16 6:33 PM: --

[jira] [Updated] (UIMA-4786) uima-core test case copy/paste bug

2016-07-14 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4786?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor updated UIMA-4786: - Fix Version/s: (was: 3.0.0SDKexp) > uima-core test case copy/paste bug > --

[jira] [Resolved] (UIMA-4786) uima-core test case copy/paste bug

2016-07-14 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4786?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor resolved UIMA-4786. -- Resolution: Fixed Uima V3 consolidated the compare with the form 6 code, and rewrote this - so t

[jira] [Commented] (UIMA-4722) updateDocumentAnnotation not properly doing remove from indexes

2016-07-14 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4722?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15378204#comment-15378204 ] Marshall Schor commented on UIMA-4722: -- change set 1722779 > updateDocumentAnnotation

[jira] [Resolved] (UIMA-4722) updateDocumentAnnotation not properly doing remove from indexes

2016-07-14 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4722?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor resolved UIMA-4722. -- Resolution: Fixed Not sure this was ever a real issue. > updateDocumentAnnotation not properly d

[jira] [Commented] (UIMA-4618) jcasgen maven plugin reports only NPE for reserved feature name

2016-07-14 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4618?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15378250#comment-15378250 ] Marshall Schor commented on UIMA-4618: -- anyone got a test case for this? The code in

[jira] [Commented] (UIMA-4769) sofa mapping not set properly for flow controllers

2016-07-14 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4769?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15378256#comment-15378256 ] Marshall Schor commented on UIMA-4769: -- change set 1729833 > sofa mapping not set pro

[jira] [Resolved] (UIMA-4769) sofa mapping not set properly for flow controllers

2016-07-14 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4769?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor resolved UIMA-4769. -- Resolution: Fixed Assignee: Marshall Schor Fix Version/s: 3.0.0SDKexp > sofa mapp

[jira] [Commented] (UIMA-4743) errors in plain binary cas delta serialization of short/long modifications to arrays

2016-07-14 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4743?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15378459#comment-15378459 ] Marshall Schor commented on UIMA-4743: -- Proposal for introducing this fix, addressing

[jira] [Created] (UIMA-5014) uimaj - change next release version to 2.9.0 from 2.8.2

2016-07-15 Thread Marshall Schor (JIRA)
Marshall Schor created UIMA-5014: Summary: uimaj - change next release version to 2.9.0 from 2.8.2 Key: UIMA-5014 URL: https://issues.apache.org/jira/browse/UIMA-5014 Project: UIMA Issue Type

[jira] [Updated] (UIMA-4991) eliminate need for shared data parameter in xmi serialization

2016-07-15 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4991?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor updated UIMA-4991: - Fix Version/s: (was: 2.8.2SDK) > eliminate need for shared data parameter in xmi serialization

[jira] [Assigned] (UIMA-4618) jcasgen maven plugin reports only NPE for reserved feature name

2016-07-15 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4618?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor reassigned UIMA-4618: Assignee: Marshall Schor > jcasgen maven plugin reports only NPE for reserved feature name >

[jira] [Resolved] (UIMA-4618) jcasgen maven plugin reports only NPE for reserved feature name

2016-07-15 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4618?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor resolved UIMA-4618. -- Resolution: Fixed > jcasgen maven plugin reports only NPE for reserved feature name > ---

[jira] [Commented] (UIMA-4743) errors in plain binary cas delta serialization of short/long modifications to arrays

2016-07-17 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4743?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15381599#comment-15381599 ] Marshall Schor commented on UIMA-4743: -- I think not. Delta Cas requires the exact ori

[jira] [Commented] (UIMA-4899) UIMACPP access violation in destroyJNI()

2016-07-18 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4899?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15382371#comment-15382371 ] Marshall Schor commented on UIMA-4899: -- I don't know, but I'm pinging a couple of peop

[jira] [Created] (UIMA-5030) UV3 Pear Support

2016-07-25 Thread Marshall Schor (JIRA)
Marshall Schor created UIMA-5030: Summary: UV3 Pear Support Key: UIMA-5030 URL: https://issues.apache.org/jira/browse/UIMA-5030 Project: UIMA Issue Type: Sub-task Components: Core J

[jira] [Commented] (UIMA-5032) Support feature toggle using lazy annotator initialization

2016-07-29 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5032?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15399471#comment-15399471 ] Marshall Schor commented on UIMA-5032: -- Component initialization has 2 parts: * gettin

[jira] [Created] (UIMA-5038) UV3 refactor class loading for consistency / maintainability

2016-08-03 Thread Marshall Schor (JIRA)
Marshall Schor created UIMA-5038: Summary: UV3 refactor class loading for consistency / maintainability Key: UIMA-5038 URL: https://issues.apache.org/jira/browse/UIMA-5038 Project: UIMA Issu

[jira] [Updated] (UIMA-5038) UV3 refactor class loading for consistency / maintainability

2016-08-04 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5038?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor updated UIMA-5038: - Description: There are 4 main places the UIMA framework loads classes: the Framework itself at sta

[jira] [Assigned] (UIMA-5041) JsonCasSerializer creates duplicate shortname

2016-08-05 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5041?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor reassigned UIMA-5041: Assignee: Marshall Schor > JsonCasSerializer creates duplicate shortname > -

[jira] [Commented] (UIMA-5041) JsonCasSerializer creates duplicate shortname

2016-08-05 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5041?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15409448#comment-15409448 ] Marshall Schor commented on UIMA-5041: -- Thank you for reporting this. Looking at the

[jira] [Commented] (UIMA-5041) JsonCasSerializer creates duplicate shortname

2016-08-05 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5041?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15409461#comment-15409461 ] Marshall Schor commented on UIMA-5041: -- The fix may result in two types, one named "TO

[jira] [Resolved] (UIMA-5041) JsonCasSerializer creates duplicate shortname

2016-08-05 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5041?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor resolved UIMA-5041. -- Resolution: Fixed Fix Version/s: 2.9.0SDK > JsonCasSerializer creates duplicate shortname

[jira] [Resolved] (UIMA-4743) errors in plain binary cas delta serialization of short/long modifications to arrays

2016-08-05 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4743?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor resolved UIMA-4743. -- Resolution: Fixed > errors in plain binary cas delta serialization of short/long modifications to

[jira] [Resolved] (UIMA-5014) uimaj - change next release version to 2.9.0 from 2.8.2

2016-08-05 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5014?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor resolved UIMA-5014. -- Resolution: Fixed > uimaj - change next release version to 2.9.0 from 2.8.2 > ---

[jira] [Resolved] (UIMA-4685) Support different CAS serializations in CAS Editor

2016-08-05 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4685?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor resolved UIMA-4685. -- Resolution: Fixed > Support different CAS serializations in CAS Editor >

[jira] [Commented] (UIMA-4580) Findbugs (and others) fail on Java 8 CI build

2016-08-05 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4580?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15409900#comment-15409900 ] Marshall Schor commented on UIMA-4580: -- can this issue now be resolved/closed? > Find

[jira] [Reopened] (UIMA-4743) errors in plain binary cas delta serialization of short/long modifications to arrays

2016-08-06 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4743?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor reopened UIMA-4743: -- Assignee: Marshall Schor this was resolved in error - no work was done. Also, need to have thi

[jira] [Updated] (UIMA-4743) errors in plain binary cas delta serialization of short/long modifications to arrays

2016-08-08 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4743?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor updated UIMA-4743: - Description: (Found by code reading, needs test case) The code in class CASSerializer for handling

[jira] [Updated] (UIMA-4743) errors in plain binary cas delta serialization of short/long modifications to arrays

2016-08-08 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4743?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor updated UIMA-4743: - Description: (Found by code reading, needs test case) The code in class CASSerializer for handling

[jira] [Resolved] (UIMA-4743) errors in plain binary cas delta serialization of short/long modifications to arrays

2016-08-08 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4743?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor resolved UIMA-4743. -- Resolution: Fixed fixed. The output format changes for delta binary serialization of modificati

[jira] [Updated] (UIMA-4685) Add Common Load/Save APIs, including type system and index defs, for various CAS formats

2016-08-08 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4685?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor updated UIMA-4685: - Summary: Add Common Load/Save APIs, including type system and index defs, for various CAS formats

[jira] [Updated] (UIMA-4685) Add Common Load/Save APIs, including type system and index defs, for various CAS formats

2016-08-08 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4685?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor updated UIMA-4685: - Description: Create a new CasIOUtils class having common load and save APIs, with optional saving o

[jira] [Updated] (UIMA-4685) Add Common Load/Save APIs, including type system and index defs, for various CAS formats

2016-08-08 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4685?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor updated UIMA-4685: - Description: Create a new CasIOUtils class having common load and save APIs, with optional saving o

[jira] [Commented] (UIMA-4685) Add Common Load/Save APIs, including type system and index defs, for various CAS formats

2016-08-08 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4685?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15411990#comment-15411990 ] Marshall Schor commented on UIMA-4685: -- Peter, I updated the definition and title of t

[jira] [Commented] (UIMA-4685) Add Common Load/Save APIs, including type system and index defs, for various CAS formats

2016-08-08 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4685?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15412041#comment-15412041 ] Marshall Schor commented on UIMA-4685: -- Thanks for the reminder. This is fixed in ver

[jira] [Commented] (UIMA-5043) Provide method to access individual external override settings

2016-08-09 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5043?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15413892#comment-15413892 ] Marshall Schor commented on UIMA-5043: -- UIMA applications are pipelines having a UIMA

[jira] [Commented] (UIMA-5043) Provide method to access individual external override settings

2016-08-09 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5043?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15413984#comment-15413984 ] Marshall Schor commented on UIMA-5043: -- all this can be done in a general way if the a

[jira] [Commented] (UIMA-5043) Provide method to access individual external override settings

2016-08-10 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5043?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15415306#comment-15415306 ] Marshall Schor commented on UIMA-5043: -- I think this Jira is all about providing conve

[jira] [Commented] (UIMA-5043) Provide method to access individual external override settings

2016-08-10 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5043?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15415926#comment-15415926 ] Marshall Schor commented on UIMA-5043: -- +1 > Provide method to access individual exte

[jira] [Commented] (UIMA-5043) Provide method to access individual external override settings

2016-08-10 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5043?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15416002#comment-15416002 ] Marshall Schor commented on UIMA-5043: -- My sense is that the choice of API depends on

[jira] [Commented] (UIMA-5043) Provide method to access individual external override settings

2016-08-10 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5043?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15416266#comment-15416266 ] Marshall Schor commented on UIMA-5043: -- I imagine end-users are people interested in w

[jira] [Commented] (UIMA-5054) JCas returning generic class instead of JCas cover class

2016-08-12 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5054?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15418944#comment-15418944 ] Marshall Schor commented on UIMA-5054: -- The logic for switching classloaders is meant

[jira] [Commented] (UIMA-5054) JCas returning generic class instead of JCas cover class

2016-08-12 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5054?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15419014#comment-15419014 ] Marshall Schor commented on UIMA-5054: -- I see I read the Jira description backwards, p

[jira] [Commented] (UIMA-5054) JCas returning generic class instead of JCas cover class

2016-08-12 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5054?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15419186#comment-15419186 ] Marshall Schor commented on UIMA-5054: -- I'm having some difficulting running this. I

[jira] [Comment Edited] (UIMA-5054) JCas returning generic class instead of JCas cover class

2016-08-12 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5054?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15419186#comment-15419186 ] Marshall Schor edited comment on UIMA-5054 at 8/12/16 5:43 PM: --

[jira] [Commented] (UIMA-5054) JCas returning generic class instead of JCas cover class

2016-08-12 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5054?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15419232#comment-15419232 ] Marshall Schor commented on UIMA-5054: -- I made a maven project that includes the depen

[jira] [Comment Edited] (UIMA-5054) JCas returning generic class instead of JCas cover class

2016-08-12 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5054?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15419232#comment-15419232 ] Marshall Schor edited comment on UIMA-5054 at 8/12/16 6:12 PM: --

[jira] [Commented] (UIMA-5054) JCas returning generic class instead of JCas cover class

2016-08-12 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5054?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15419281#comment-15419281 ] Marshall Schor commented on UIMA-5054: -- sent to rec at apache > JCas returning generi

[jira] [Commented] (UIMA-5054) JCas returning generic class instead of JCas cover class

2016-08-12 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5054?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15419363#comment-15419363 ] Marshall Schor commented on UIMA-5054: -- I'm ignoring that NPE for now, and proceeding

[jira] [Commented] (UIMA-5054) JCas returning generic class instead of JCas cover class

2016-08-12 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5054?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15419399#comment-15419399 ] Marshall Schor commented on UIMA-5054: -- It appears that the uimaFIT code is creating t

[jira] [Commented] (UIMA-5054) JCas returning generic class instead of JCas cover class

2016-08-12 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5054?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15419418#comment-15419418 ] Marshall Schor commented on UIMA-5054: -- re: thread context class loader support in UIM

[jira] [Commented] (UIMA-5054) JCas returning generic class instead of JCas cover class

2016-08-12 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5054?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15419446#comment-15419446 ] Marshall Schor commented on UIMA-5054: -- In order to see the NPE, you have to run the M

[jira] [Commented] (UIMA-5054) JCas returning generic class instead of JCas cover class

2016-08-12 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5054?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15419457#comment-15419457 ] Marshall Schor commented on UIMA-5054: -- The UIMA extension class loader is one of thos

[jira] [Commented] (UIMA-5054) JCas returning generic class instead of JCas cover class

2016-08-12 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5054?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15419460#comment-15419460 ] Marshall Schor commented on UIMA-5054: -- :-) thinking about class loaders hurts my fee

[jira] [Commented] (UIMA-5054) JCas returning generic class instead of JCas cover class

2016-08-12 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5054?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15419524#comment-15419524 ] Marshall Schor commented on UIMA-5054: -- Throwing out a possibility to think about: 1)

[jira] [Issue Comment Deleted] (UIMA-5054) JCas returning generic class instead of JCas cover class

2016-08-12 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5054?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor updated UIMA-5054: - Comment: was deleted (was: :-) thinking about class loaders hurts my feeble brain. I'll take a l

[jira] [Commented] (UIMA-5054) JCas returning generic class instead of JCas cover class

2016-08-12 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5054?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15419550#comment-15419550 ] Marshall Schor commented on UIMA-5054: -- ok, see the proposal below > JCas returning g

[jira] [Commented] (UIMA-5054) JCas returning generic class instead of JCas cover class

2016-08-12 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5054?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15419558#comment-15419558 ] Marshall Schor commented on UIMA-5054: -- Even with a null class path, the creation of a

[jira] [Comment Edited] (UIMA-5054) JCas returning generic class instead of JCas cover class

2016-08-13 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5054?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15419558#comment-15419558 ] Marshall Schor edited comment on UIMA-5054 at 8/13/16 7:05 PM: --

[jira] [Created] (UIMA-5055) JCas not always initialized

2016-08-13 Thread Marshall Schor (JIRA)
Marshall Schor created UIMA-5055: Summary: JCas not always initialized Key: UIMA-5055 URL: https://issues.apache.org/jira/browse/UIMA-5055 Project: UIMA Issue Type: Bug Components:

[jira] [Created] (UIMA-5056) UIMA Class loader switching design needs to support more than 2

2016-08-14 Thread Marshall Schor (JIRA)
Marshall Schor created UIMA-5056: Summary: UIMA Class loader switching design needs to support more than 2 Key: UIMA-5056 URL: https://issues.apache.org/jira/browse/UIMA-5056 Project: UIMA

[jira] [Updated] (UIMA-5056) UIMA Class loader switching design needs to support more than 2 levels

2016-08-14 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5056?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor updated UIMA-5056: - Summary: UIMA Class loader switching design needs to support more than 2 levels (was: UIMA Class l

[jira] [Updated] (UIMA-5056) UIMA Class loader switching design needs to support more than 2 levels

2016-08-14 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5056?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor updated UIMA-5056: - Description: A recent Jira UIMA-5054 highlighted a potential use case not previously adequately co

[jira] [Updated] (UIMA-5055) JCas not always initialized

2016-08-15 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5055?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor updated UIMA-5055: - Description: JCas classes are loaded lazily on the first switch of the CAS to the JCas format. JC

[jira] [Updated] (UIMA-5055) JCas not always initialized

2016-08-15 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5055?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Marshall Schor updated UIMA-5055: - Description: JCas classes are loaded lazily on the first switch of the CAS to the JCas format. JC

[jira] [Commented] (UIMA-5054) JCas returning generic class instead of JCas cover class

2016-08-15 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-5054?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15421308#comment-15421308 ] Marshall Schor commented on UIMA-5054: -- This is now fixed under UIMA-5055. The proble

[jira] [Commented] (UIMA-4685) Add Common Load/Save APIs, including type system and index defs, for various CAS formats

2016-08-15 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4685?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15421346#comment-15421346 ] Marshall Schor commented on UIMA-4685: -- After some discussion, it seems some slight cl

[jira] [Comment Edited] (UIMA-4685) Add Common Load/Save APIs, including type system and index defs, for various CAS formats

2016-08-15 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4685?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15421346#comment-15421346 ] Marshall Schor edited comment on UIMA-4685 at 8/15/16 6:03 PM: --

[jira] [Commented] (UIMA-4685) Add Common Load/Save APIs, including type system and index defs, for various CAS formats

2016-08-15 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4685?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15421391#comment-15421391 ] Marshall Schor commented on UIMA-4685: -- Compressed Binary deserialization requires kno

[jira] [Commented] (UIMA-4685) Add Common Load/Save APIs, including type system and index defs, for various CAS formats

2016-08-15 Thread Marshall Schor (JIRA)
[ https://issues.apache.org/jira/browse/UIMA-4685?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15421398#comment-15421398 ] Marshall Schor commented on UIMA-4685: -- good point :-) So it seems we may have reason

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