I am looking for advice regarding how to write medical journal
articles using org-mode.
My primary motivations are the desire to ... automate the flow of data
from computation to publication, avoid clerical errors, speed up the
conversion of computational results to manuscript, and do 99.9% of my
> Manish writes:
>
>> manishsharma:org-mode/ (master) $ grep defcustom lisp/*el |wc -l
>> 808
>
> Ouch. That's nearly half of the 1792 Emacs options!
>
> It certainly says something, but I don't know what :)
Maybe it says it's still a long way to go ;)
cd gnus_git && grep defcustom lisp/*.
John Kitchin writes:
> I got icicles via ELPA. The version from describe-package is
> Version: 20140118.1856. although in icicles.el it says ;; Version:
> 2013.07.23.
That is the current version.
Icicles isn't only icicle.el, Drew has actually a whole bunch of
elisp addon packages. Some I use,
> Von: Bastien
> Datum: Sun, 19 Jan 2014 16:54:55 +0100
> An: Manish
> Cc: emacs org-mode mailing list , Carsten Dominik
>
> Betreff: Re: [O] [Orgmode] POLL: the 40 variables project
>
> Manish writes:
>
>> manishsharma:org-mode/ (master) $ grep defcustom lisp/*el |wc -l
>> 808
>
> O
Hello,
** Rasmus [2014-01-19 15:19:40 +0100]:
> Vladimir Lomov writes:
>> Hello,
>> ** Rasmus [2014-01-18 20:36:35 +0100]:
>>> Hi,
>>> This example produces invalid LaTeX code:
>>> #+CAPTION: test
>>> #+ATTR_LATEX: :mode math :environment pmatrix
>>> | \alpha | \beta | \gamma |
>>> Namely,
regcl writes:
Oops, my error... Once I did this ...
(setq org-default-notes-file (concat org-directory "/notes.org"))
... everything works great! ... sorry for the false alarm!
Best,
George
> I am having difficult creating an org entry from a bibtex file
> entry. Here is what I am doing:
>
>
I am having difficult creating an org entry from a bibtex file
entry. Here is what I am doing:
1) open .bib file
2) position point in entry
3) M-x org-capture
4) respond to prompt: 'Template key:' with: t
Instead of an link in the .org file, I get the message: 'Target buffer
".notes" for file
Sylvain Chouleur writes:
> Done
Applied. Thank you.
Regards,
--
Nicolas Goaziou
I got icicles via ELPA. The version from describe-package is Version:
20140118.1856. although in icicles.el it says ;; Version: 2013.07.23.
Thanks for the tip about the binding variable. I am content with this in my
init file:
(require 'icicles)
;; reclaim C-c ' for org-mode
(setq icicle-top-lev
thanks for the ideas.
I put together a new kind of link that takes you to files inside of emacs
packages, or to paths relative to where a library is installed.
http://kitchingroup.cheme.cmu.edu/blog/2014/01/19/Making-org-mode-links-to-files-in-Emacs-packages/
basically I find where the library o
Done
2014/1/19 Nicolas Goaziou
> Hello,
>
> Sylvain Chouleur writes:
>
> > Well seen,
> > here is the new patch, working as well.
>
> Thank you. If you haven't signed FSF papers, could you add "TINYCHANGE"
> at the end of your commit message so I can apply it?
>
>
> Regards,
>
> --
> Nicolas G
Hello,
Rasmus writes:
> OK. I can prepare a patch.
Great. Thank you.
> In LaTeX the floating would be kind of odd, I think. At the very
> least math floats shouldn't be Figure or Tables (IMO); unfortunately
> the Internets seem to suggest that you usually create additional
> floats via packa
Hello,
Sylvain Chouleur writes:
> Well seen,
> here is the new patch, working as well.
Thank you. If you haven't signed FSF papers, could you add "TINYCHANGE"
at the end of your commit message so I can apply it?
Regards,
--
Nicolas Goaziou
Hello,
Marcin Borkowski writes:
> In LaTeX, I can reference quite a lot of things using the \label/\ref
> mechanism. Is there anything like this in Org? Grepping the docs for
> "reference" didn't help.
>
> In particular, I'd like to be able to reference to some item on a
> numbered list withou
John Kitchin writes:
> I am trying it out, and icicles seems to have clobbered a few key
> bindings like C-c ' to open source blocks.
I used to have the same problem with "C-c '" at one point in time,
but not anymore. This was the only binding which got in the way.
Using customize-option on ic
Hi list,
In LaTeX, I can reference quite a lot of things using the \label/\ref
mechanism. Is there anything like this in Org? Grepping the docs for
"reference" didn't help.
In particular, I'd like to be able to reference to some item on a
numbered list without hardcoding the number. Is that po
After my recent encounters with mixed installs, I poked around a bit
and found this line (around line 80) in org.el
(load "org-loaddefs.el" t t t)
It seems to me (with very scant knowledge of course :D)
- the noerror (first 't' ) makes this fail silently
- to load another org-loaddefs in the path
Hi Nick!
This is an awesome response!
Great job!!
Regards,
Bernt
Nick Dokos writes:
> Renato writes:
>
>> Hi,
>> I know, ther's a lot of doc around there. But: can someone show me
>> "the best" road map" to start using (and learning) org-mode?
>>
>
> Org is a swiss army knife: if you open u
Hi François,
François Pinard writes:
> Now, in this mode, if I put the mark on the `a' letter and the point on
> the `d' letter, and type `C-x r t SPC SPC RET', I then see:
>
> ,
> | * Trying blue
> | anormal
> | = b= normal
> | * c*blue
> |
Hi Giuseppe,
Giuseppe Lipari writes:
> Remember to cover the basics, that is, what you expected to happen
> and
> what in fact did happen. You don't know how to make a good report?
> See
>
> http://orgmode.org/manual/Feedback.html#Feedback
>
> Your bug report will be posted to the Org-mod
Hi Nick,
Nick Daly writes:
> Hi folks, I have a situation where I have many named code snippets
> currently available in external files, and would like to tangle them
> into an Org mode file. Is it currently possible to tangle included
> files?
I just wanted to confirm this is not currently
Manish writes:
> manishsharma:org-mode/ (master) $ grep defcustom lisp/*el |wc -l
> 808
Ouch. That's nearly half of the 1792 Emacs options!
It certainly says something, but I don't know what :)
--
Bastien
Hi John,
John Kitchin writes:
> I am trying it out, and icicles seems to have clobbered a few key
> bindings like C-c ' to open source blocks.
>
> It doesn't seem to matter which order I load these packages. Does
> anyone do this without clobbering org bindings? Thanks,
I suggest to ask Drew d
Hi Samuel,
Samuel Wales writes:
> It seems to work. Thank you, Bastien.
>
> I wasn't sure if this was the same bug as Susan's, but it seems to
> be.
Yes it is.
> Why does folding affect semantics?
Folding affects any function that has to deal with the visibility
state of the text.
When prom
Hi Mirko and Nicolas,
Nicolas Goaziou writes:
> Thank you for the report. However, I don't think it is possible to fix
> it, because "\[" in a docstring is treated specially. See:
>
> (info "(elisp) Keys in Documentation").
I fixed this by using \=\[ --- which is a trick I just discovered
in
Hi Nicolas and Robert,
Nicolas Goaziou writes:
> The current behaviour is to keep tags of the root node when you export
> a subtree. If you want to get rid of them, you can set an :EXPORT_TITLE:
> property in the same node.
I think we should only consider the bare heading: we already get rid
of
Achim Gratz writes:
> The first question is what do we want contrib to be?
So let's start with this one.
contrib/ *was* a staging area for stuff that were meant to go into
core at some point---i.e. when they get mature enough and when the
copyright assignments are sorted out.
For most librar
Vladimir Lomov writes:
> Hello,
> ** Rasmus [2014-01-18 20:36:35 +0100]:
>
>> Hi,
>
>> This example produces invalid LaTeX code:
>
>> #+CAPTION: test
>> #+ATTR_LATEX: :mode math :environment pmatrix
>> | \alpha | \beta | \gamma |
>
>> Namely,
>
>> \begin{equation}
>> \caption{test text}
>> \mathb
Nicolas Goaziou writes:
> Hello,
>
> Rasmus writes:
>
>> This example produces invalid LaTeX code:
>>
>> #+CAPTION: test
>> #+ATTR_LATEX: :mode math :environment pmatrix
>> | \alpha | \beta | \gamma |
>>
>> Namely,
>>
>> \begin{equation}
>> \caption{test text}
>> \mathbf{H}=\begin{pmatrix}
>> \
Bastien writes:
> Shouldn't we ask Emacs maintainers about this? ox-koma-letter.el into
> core means that bug reports will hit them first, then us.
Debbugs has facilities to redirect such reports to this mailing list
should that become an issue. Gnus is using this approach AFAIK.
> My suggestio
"Fabrice Niessen"
writes:
> Hello Michael,
>
> Michael Hoffman wrote:
>> I use the weekly/daily agenda and want to be able to use the SCHEDULED
>> keyword
>> to hide items until the scheduled time comes up. I don't want to think about
>> them until then. How can I set up org-agenda-list to do th
Well seen,
here is the new patch, working as well.
Thanks
--
Sylvain
2014/1/18 Nicolas Goaziou
> Sylvain Chouleur writes:
>
> > But beg and end are positions, not markers, I am wrong?
>
> BEG and END are positions, but `copy-marker' accepts an integer as its
> first argument. See its docstrin
Hello,
On 01/15/2014 01:20 PM, Alexander Baier wrote:
Hello Roger,
when answering a mail/post from the list, please Cc the list in your
response, so other members of the list can see your mail to.
On 2014-01-15 14:30 Roger Mason wrote:
But this does not:
/Perhaps, but [...] to replacement./
Carsten Dominik writes:
>> "ox-koma-letter" is an export back-end living in contrib, which, as you
>> may know, allows to easily produce letters from Org. I think this is
>> a nice feature to have[fn:1]. Should we have it in core?
>
> I like the koma-letter class and have no objections to move it
Hello,
Robert Klein writes:
> `org-export-with-tags' doesn't seem to work at all when a headline is
> made title of a subtree export.
>
>
> When using the appended configuration and org-file; point on the line
> "point is here"; I'm subtree exporting using C-c C-e C-s h H and I get
>
> #+begin_e
Hi Bastien, Sebastien,
`org-export-with-tags' doesn't seem to work at all when a headline is
made title of a subtree export.
When using the appended configuration and org-file; point on the line
"point is here"; I'm subtree exporting using C-c C-e C-s h H and I get
#+begin_example
...
second h
Hi Fabrice,
"Fabrice Niessen"
writes:
> Michael Hoffman wrote:
>> I use the weekly/daily agenda and want to be able to use the SCHEDULED
>> keyword
>> to hide items until the scheduled time comes up. I don't want to think about
>> them until then. How can I set up org-agenda-list to do this?
Hello Michael,
Michael Hoffman wrote:
> I use the weekly/daily agenda and want to be able to use the SCHEDULED keyword
> to hide items until the scheduled time comes up. I don't want to think about
> them until then. How can I set up org-agenda-list to do this?
>
> This is the list of agenda items
Hello,
Rasmus writes:
> This example produces invalid LaTeX code:
>
> #+CAPTION: test
> #+ATTR_LATEX: :mode math :environment pmatrix
> | \alpha | \beta | \gamma |
>
> Namely,
>
> \begin{equation}
> \caption{test text}
> \mathbf{H}=\begin{pmatrix}
> \vdots & 0 & \vdots \\
> \vdots & H & \vdots
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