Re: [O] A manuscript on reproducible research introducing org-mode

2012-02-18 Thread Thomas S. Dye
Samuel Wales samolog...@gmail.com writes: As a followup to my last comment, this explains how Stapel fooled almost everybody and kept raw data hidden: http://chronicle.com/blogs/percolator/the-fraud-who-fooled-almost-everyone/27917 And NYT Fraud Case Seen as a Red Flag for Psychology

Re: [O] A manuscript on reproducible research introducing org-mode

2012-02-18 Thread Rasmus
t...@tsdye.com (Thomas S. Dye) writes: I just ran across this article on reproducible research that some of you might find interesting. http://journal.r-project.org/archive/2011-2/RJournal_2011-2_Lundholm.pdf On reproducible research, are you guys aware of the relatively recent project

Re: [O] A manuscript on reproducible research introducing org-mode

2012-02-16 Thread Jambunathan K
Christophe I see an ODT file in there - LFPdetection_in.odt http://hal.archives-ouvertes.fr/hal-00591455/ May I ask how the document was produced. Do you have any insights on how the Org's ODT exporter performs wrt your input Org file. Just curious. @article{Delescluse2011, title = Making

Re: [O] A manuscript on reproducible research introducing org-mode

2012-02-16 Thread Christophe Pouzat
Hello Jambunathan, The ODT version was prepared by hand using LibreOffice. This was written (last May) before your org-odt functions became part of org-mode (if I'm right). I would now also do it with org-mode. Christophe Jambunathan K kjambunat...@gmail.com writes: Christophe I see an ODT

Re: [O] A manuscript on reproducible research introducing org-mode

2012-02-16 Thread Stephen Eglen
Samuel Wales samolog...@gmail.com writes: I applaud all of this. Raw data need to be made available by default (with only a few exceptions). Org can help people reproduce all of the succeeding steps also. Some people on the list might like to see the short (13 min) segment on Duke

Re: [O] A manuscript on reproducible research introducing org-mode

2012-02-16 Thread Samuel Wales
As a followup to my last comment, this explains how Stapel fooled almost everybody and kept raw data hidden: http://chronicle.com/blogs/percolator/the-fraud-who-fooled-almost-everyone/27917 And NYT Fraud Case Seen as a Red Flag for Psychology Research which has a raw data take:

Re: [O] A manuscript on reproducible research introducing org-mode

2012-02-15 Thread Thomas S. Dye
Aloha Christophe, Has this article appeared in print? If so, can you forward publication details? All the best, Tom Christophe Pouzat christophe.pou...@parisdescartes.fr writes: Thomas S. Dye t...@tsdye.com a écritnbsp;: Christophe Pouzat christophe.pou...@parisdescartes.fr writes: Dear

Re: [O] A manuscript on reproducible research introducing org-mode

2012-02-15 Thread Samuel Wales
I applaud all of this. Raw data need to be made available by default (with only a few exceptions). Org can help people reproduce all of the succeeding steps also. Another aspect is fraud, which is rampant. A psychologist in Europe recently accused of fraud was said to have been able to guard

Re: [O] A manuscript on reproducible research introducing org-mode

2012-02-15 Thread Christophe Pouzat
Aloha Tom, Not yet in print, still on the accepted papers list (http://www.sciencedirect.com/science/journal/aip/09284257), sorry. It seems that I chose the slowest neuroscience journal! Your JSS paper of last month (with Eric, Dan and Carsten) is great by the way. It seems that I missed the

Re: [O] A manuscript on reproducible research introducing org-mode

2011-09-08 Thread Christophe Pouzat
Thomas S. Dye t...@tsdye.com a écritnbsp;: Christophe Pouzat christophe.pou...@parisdescartes.fr writes: Dear all, M. Delescluse, R. Franconville, S. Joucla, T. Lieury and myself (C. Pouzat) have just put a manuscript entitled: Making neurophysiological data analysis reproducible. Why and

[O] A manuscript on reproducible research introducing org-mode

2011-09-05 Thread Christophe Pouzat
Dear all, M. Delescluse, R. Franconville, S. Joucla, T. Lieury and myself (C. Pouzat) have just put a manuscript entitled: Making neurophysiological data analysis reproducible. Why and how? on a pre-print server: http://hal.archives-ouvertes.fr/hal-00591455/fr/ Although the paper has been

Re: [O] A manuscript on reproducible research introducing org-mode

2011-09-05 Thread Thomas S. Dye
Christophe Pouzat christophe.pou...@parisdescartes.fr writes: Dear all, M. Delescluse, R. Franconville, S. Joucla, T. Lieury and myself (C. Pouzat) have just put a manuscript entitled: Making neurophysiological data analysis reproducible. Why and how? on a pre-print server: