Re: [Freesurfer] csurf problem on RedHat Linux EL2.15

You can try downloading the source and compiling it yourself: http://opengl.org/resources/libraries/glut.html On Thu, 12 Aug 2004, Xiaojian Kang wrote: Hi, I am trying to run csurf (Feb 2004 version) on RedHat Linux Enterprise 2.15 system. We choose this version of Linux because it supports AMD64 (

[Freesurfer] csurf problem on RedHat Linux EL2.15

Hi, I am trying to run csurf (Feb 2004 version) on RedHat Linux Enterprise 2.15 system. We choose this version of Linux because it supports AMD64 (64-bit). I can start csurf interface, but cannot run either tkmedit or tksurfer, the error megs are: /usr/local/FreeSurfer/bin/Linux/tkmedit: error wh

[Freesurfer] title of the grant

for anyone willing to write letters, I think we will call it: Software tools for analyzing cortical structure and connectivity I didn't make this clear before, but we'll need letters mailed to us on letterhead stationary with signatures. thanks, Bruce -

[Freesurfer] displaying labels in matlab

Hi, what is the best way to display a label in matlab? thanks -Oleg ___ Freesurfer mailing list [EMAIL PROTECTED] https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

Re: [Freesurfer] How to display lh.average.tif

you should be able to load it as a curvature file onto whatever subject you specified in mrisp_paint. cheers, Bruce On Thu, 12 Aug 2004, XJ Kang wrote: Hi, I am trying to convert and display the average template ?h.average.tif. I already used "mrisp_paint" to get the average curve file "lh.avg_c

[Freesurfer] preventative maintenance

We've noticed that when Siemens performs their quarterly preventative maintenance (PM) on our Allegra scanner that the shape/size of our mprages changes after the system is brought to spec. This may pose a problem if we scan a subject before a PM to create a surface reconstruction, and then s

[Freesurfer] How to display lh.average.tif

Hi, I am trying to convert and display the average template ?h.average.tif. I already used "mrisp_paint" to get the average curve file "lh.avg_curv". How to display the file? Or convert it to an ascii file? Thanks in advance. XJ Kang ___ Freesurfer ma

[Freesurfer] QA and documentation

Hi All, I have a favor to ask. We are trying to generate funding to hire a person to do quality assurance, and another to generate documentation, but it has been difficult. We are currently writing a grant explicitly for these positions, and one of the requirements of the funding mechanism is to

Re: [Freesurfer] overview of motion correction

you have to install the fsl stuff from Oxford. Bruce On Thu, 12 Aug 2004, Chekema Nayasha Prince wrote: I ran the fsl_rigid_register command and I received the following error. I am not sure what flirt it is looking for. Here is the command I used also: fsl_rigid_register -r TFL_2107_2test/mri/T1

Re: [Freesurfer] overview of motion correction

I ran the fsl_rigid_register command and I received the following error. I am not sure what flirt it is looking for. Here is the command I used also: fsl_rigid_register -r TFL_2107_2test/mri/T1/ -i TFL_2107_8test/mri/T1/ -o TFL_2107_8test/mri/resample/ /home/freesurfer/freesurfer-20040218/freesur