Hi everyone,
We're making a template to register some monkey brain surfaces to.
I've written a script based on instructions from the Surface
Registration and Templates page ( http://surfer.nmr.mgh.harvard.edu/fswiki/SurfaceRegAndTemplates
) on FreeSurfer wiki.
I'm stuck at Round 1 with
Hi Jan,
you should use the ?h.sphere.reg on the 2nd round. On our 1st round we
use a single subject ?h.sphere to avoid blurring the folding patterns too
much, then register all to that one, create the atlas from all the
subjects (with the sphere.reg), then recreate all the sphere.reg by
Thanks Bruce,
One more question, just to be sure, when using mris_register, the
first time I use:
mris_register \
-curv \
$SUBJECTS_DIR/bu_edited/surf/lh.sphere \
lh.monk_temp_wreg1.tif \
$SUBJECTS_DIR/bu_edited/surf/lh.sphere.reg
Is this correct? I
you could do it different ways, but we always start with the lh.sphere to
try to find the minimally distorting transformation.
Bruce
On Sun, 24 Aug 2008, Jan Kalkus wrote:
Thanks Bruce,
One more question, just to be sure, when using mris_register, the first time
I use:
