Hi,
I'm Leonardo an italian student of Pisa. I'm writing to you to ask if there's
any way to
correct this problem:
we have a 3.0T machine with a 8 channels head coil to acquire the volumetric
image. we
have found a big inhomogeneity in the contrast of the image particularly in the
frontal
lob
Hi,
I'd like to launch recon-all with a nifti input file and get a nifti file in
output...
Do you know how can I do that?
Thanks in advance!
Chris'
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Hi Chris,
you can use nifit as input with no problem, and you can convert any of the
output volumes to nifti using mri_convert.
cheers,
Bruce
On Wed, 14 Apr 2010, Christophe Chênes wrote:
Hi,
I'd like to launch recon-all with a nifti input file and get a nifti file in
output...
Do you kno
Hi Leonardo,
we need more details about your acquisition. What sequence with what
parameters? What type of scanner? Was there any prescan normalization?
Which 8 channel coil did you use and do you have access to other coils?
cheers
Bruce
On
Wed, 14 Apr 2010 chesi.leona...@alice.it wrote:
> Hi
yes, you can use the talairach.xfm file to get MNI coords of whatever you
want. Not sure if it is reported anywhere by default though. Doug?
On Wed,
14 Apr 2010, Diana Wotruba wrote:
> Hi Bruce
> Thank you for the quick answer. We already considered using
> mris_divide_parcellation. Unfortunatel
For the input,I try using this command:
# recon-all -s $MY_SUBJECT -i $SUBJECT_DIR/$MY_SUBJECT/mri/
orig/sujet01.nii.gz -all -notal-check -no-isrunning
It returns the following error:
# ERROR: /home/christophe/con/dvlp/pipe/FS/subjects/sujet01 exists, delete
or re-run with -force
...
__
that means the subject already exists, probably from a previous run that
failed. Did you try running it with -force?
On Wed, 14 Apr 2010, Christophe
Chênes wrote:
For the input,I try using this command:
# recon-all -s $MY_SUBJECT -i $SUBJECT_DIR/$MY_SUBJECT/mri/
orig/sujet01.nii.gz -all -nota
Hi Ed,
What do you exactly mean? The right click and drag doesn't remove the
voxels and the middle click and drag doesn't add the voxels? I tried
it and it works for me.
I've copied the nightly build to
ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/fsdev/krish/intel-mac/tkmedit.bin
hello,
How can i use 3d slicer to only view the post-central gyros without the
other areas,
than you
Asaf
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The information in this
Dear Freesurfer users,
Is there a way to display time course information for blocked-design
experiments? I have used the command tkmedit-sess, which displays time
course information for event-related designs. However, it does not display
anything like that for blocked design. Is it possible to cha
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