Dear Ruopeng,
Thanks for your help, Ruopeng.I learned the groupanalysis by manu
ofhttp://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/GroupAnalysis. I ran this
command on your tutorial data (buckner data). Would you please tell me where my
hardware setup is inappropriate?
Thanks.
All the best.
R
Happy New Year freesuerfers!
I run into this error while doing recon-all :
ERROR: talairach_afd: Talairach Transform: transforms/talairach.xfm
***FAILED*** (p=0., pval=0. < threshold=0.0050)
Manual Talairach alignment may be necessary, or
include the -notal-check flag to skip this test,
Hi Victor
you can look in the recon-all -help and run the stages that are after
mri_ca_label. Not sure why -make all didn't work, perhaps Zeke and/or Nick
can comment?
Bruce
On Thu, 2 Jan 2014, Victor Kovac wrote:
Dear Bruce,
A few weeks ago you made code mods to mri_em_register and got r
Hi,
A little confusion here, when I add the control points after edits, should
I run -autorecon2 or -autorecon2-cp?
Another question is about the starting stage of autorecon2-cp, i.e. stage
10+ or stage 12+, which are stated differently on the wikipage and
tutorial.
Happy New Year!
Thanks,
Kaim
Hi Octaviaan
no, not really. You should motion correct and average them using something
like mri_motion_correct*
We do typically bandwidth/readout match them to the memprages so that there
is no differential distortion
cheers
Bruce
On Wed, 1 Jan 2014, Octavian Lie wrote:
> Dear All,
>
> We
Dear Bruce,
A few weeks ago you made code mods to mri_em_register and got recon-all to
process a subject of mine, MPS1036-1. You sent me the new
aseg.auto_noCCseg.mgz and told me to run recon-all -make all -s MPS1036-1.
I did this but I get the message
make: Nothing to be done for 'all'
and when
