Re: [Freesurfer] FSFAST mkcontrast-sess with spmhrf 2 question

2016-03-13 Thread Joseph Dien
After a long break, back to this… My goal is still to get the betas for the first and maybe second spm hrf so I can calculate a Calhoun derivative boost measure. As a first step I ran: mkanalysis-sess -fsd bold -analysis RPA.sm05.lh -surface fsaverage lh -fwhm 5 -event-related -paradigm

[Freesurfer] mri_glmfit-sim

2016-03-13 Thread John Anderson
Hi experts, I am trying to correct the results of groups analysis using mri_glmfit-sim the command is : mri_glmfit-sim --glmdir lh_10mm --cache 3 pos --cwpvalthresh .0166 I receive the follwoing error :   ERROR: cannot find