[Freesurfer] Postdoctoral position at the National Institute of Mental Health, National Institute of Health

2018-10-01 Thread Narun Pornpattananangkul
External Email - Use Caution The Mood Brain and Development Unit (MBDU) at the NIH led by Dr Argyris Stringaris is looking for a post-doc. The focus of the MBDU is on how reward processing aberrations impact on human mood and may lead to pathologies such as depression. There is a

[Freesurfer] Postdoctoral Fellow Position: Migraine and TMD Neuroimaging, Neuromodulation and Genetics Research

2018-10-01 Thread Alexandre Dasilva
External Email - Use Caution Postdoctoral Fellow Position: Migraine and TMD Neuroimaging, Neuromodulation and Genetics Research The Headache and Orofacial Pain Effort (H.O.P.E.) Lab at the University of Michigan School of Dentistry requests applications for a postdoctoral position

[Freesurfer] postdoc ad (fwd)

2018-10-01 Thread Bruce Fischl
please see the notice of a postdoc opportunity below Bruce https://opportunities.ucsf.edu/content/ucsf-dept-radiology-biomedical-imaging-seeking-postdoctoral- scholar-laboratory-precision ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu htt

Re: [Freesurfer] longitudinal TRACULA -prep error

2018-10-01 Thread Yendiki, Anastasia
Hi Carissa – Don’t set variables to “None” in the config file. Just remove those lines from the config file altogether – that’s the same as not having any inputs for them. Hope this helps, a.y From: mailto:freesurfer-boun...@nmr.mgh.harvard.edu>> on behalf of Carissa Nicole Weis mailto:cnw...

Re: [Freesurfer] Freesurfer 6.0 - Tracula - Segmentation fault

2018-10-01 Thread Yendiki, Anastasia
Hi Matt – If your original DWIs are also truncated (which is what it looks like from the screenshots you sent), then it’s not tracula that’s truncating them. Any tracts that go through the truncated part of the brain (like the ILF, which is where you were getting the error, if I remember correct

Re: [Freesurfer] error glm-fit-sim

2018-10-01 Thread Greve, Douglas N.,Ph.D.
What says that? What command are you running? What is the other terminal output? On 10/01/2018 04:54 AM, Caroline Beelen wrote: > > External Email - Use Caution > > Dear FS, > > I followed the group analysis page for glm analysis and it worked fine > until the final step. I’m using versi

Re: [Freesurfer] freeview problem on Linux RHEL 7-4 libGLU.so.1

2018-10-01 Thread Felipe Picon
External Email - Use Caution Dear Avner and fellow freesurfer users, I've just came across the same issue testing QDEC after the installation of Freesurfer 6.0 using FEDORA 28 “qdec.bin: error while loading shared libraries: libGLU.so.1: cannot open shared object file: No such fil

[Freesurfer] error glm-fit-sim

2018-10-01 Thread Caroline Beelen
External Email - Use Caution Dear FS, I followed the group analysis page for glm analysis and it worked fine until the final step. I'm using version 5.3. After performing glm-fit-sim it says "glm-fit done" (for all files), but when trying to open these it says: "Reading colorta