[Freesurfer] Deadline approaching: Deadline approaching: Neuroscience data analyst (f/m) opening at ENI Göttingen, Germany (new opening)

2018-11-22 Thread Caspar M. Schwiedrzik
External Email - Use Caution The European Neuroscience Institute Göttingen (Germany) is seeking a *Neuroscience data analyst (f/m) * initially limited until 31.12.2019 with extension options, full-time | salary according to TV-L The European Neuroscience Institute is looking to f

Re: [Freesurfer] Freeview fly through frames

2018-11-22 Thread Hervé Lemaitre
External Email - Use Caution Dear Freesurfer users, Any ideas? Does "frames" even refers to frames in the overlay? Best, Hervé LEMAITRE Faculté de Médecine Université Paris-Sud 63, rue Gabriel Péri 94276 Le Kremlin-Bicêtre - Mail original - De: "Her

[Freesurfer] FSGD-File

2018-11-22 Thread Larissa Bechtle
External Email - Use CautionHi everybody,   I am currently trying to run mris_prepoc. However FreeSurfer keeps telling me that there are no subjects specified. Thus, I think that the fsgd-file I created is the problem. I already checked it several times but still don’t know wha

[Freesurfer] Average subject normal data base

2018-11-22 Thread m s
External Email - Use Caution Hi, I am looking forward to create a normal database for daily use to compare with individual patient mr volumes. I was thinking about creating an average subject from a normal database of multiple subjects. After I have my average subject, would it be

Re: [Freesurfer] Average subject normal data base

2018-11-22 Thread Bruce Fischl
Hi Mercedes you probably want to retain the information that you have more than one control subject as opposed to simply averaging them and treating the average as a single subject. While you can create a new average, it isn't necessary to do so. You can just keep track of all the control are

Re: [Freesurfer] Freeview fly through frames

2018-11-22 Thread Bruce Fischl
Hi Hervé I'm not sure what you want is supported, although Ruopeng could probably implement it pretty quickly. The movie frame utility is to make a flythrough of the volume, slice-by-slice, or a rotational move of the surface, not go go through frames of an overlay cheers Bruce On Thu, 22

Re: [Freesurfer] freeview showing results in a strange manner

2018-11-22 Thread Bruce Fischl
Hi Shize is lh.subj1.mgz a surface overlay? If so you display it as: freeview -f lh.inflated:overlay=lh.subj1.mgz cheers Bruce On Thu, 22 Nov 2018, 姜时泽 wrote: External Email - Use Caution Hi Ruopeng, my freeview command for this result is 'freeview -v lh.subj1.mgz'. I trie