[Freesurfer] Open Faculty Position in Psychology at the University of Nevada, Reno

External Email - Use Caution Greetings Freesurfer Group, I'm not sure if it is acceptable to post open positions here, but our department is currently seeking to fill an Assistant Professor position and we would be grateful if you could share this information with the Freesurfer

Re: [Freesurfer] recon-all at native resolution

External Email - Use Caution Opps, here are the snapshots. The aseg subcortical look good using either the -hires or -conf2hires flags. The cortical parcellation is not including some ctx in several regions including the region below. [cid:image001.png@01D58B27.A63D2C70]

Re: [Freesurfer] recon-all at native resolution

There was no snapshot. Can you resend? On 10/24/2019 7:06 PM, Alexopoulos, Dimitrios wrote: > External Email - Use Caution > > I apologize for the confusion. Whether I use the -hires or -conf2hires flag > the subcortical segmentations look good. > > The cortical segmentations have some

[Freesurfer] view labels in native space

Hi Freesurfer experts I have a few labels that correspond to activation clusters in fsaverage space for an individual subject. I used mri_label2label to transfer them to native space of the subject. export SUBJECTS_DIR=/autofs/space/oprah_001/users/zn025/looming_7T/SUBJECTS_DIR mri_label2label

Re: [Freesurfer] [EXT] Re: Thalamic subnuclei color table

External Email - Use Caution Thank you! From: freesurfer-boun...@nmr.mgh.harvard.edu on behalf of Lilla Zollei Sent: Friday, October 25, 2019 8:41 AM To: Freesurfer support list Subject: [EXT] Re: [Freesurfer] Thalamic subnuclei color table

Re: [Freesurfer] Thalamic subnuclei color table

Hi Anna, See attached. Lilla On Fri, 25 Oct 2019, Crawford, Anna wrote: External Email - Use Caution Hello, Just a quick question. We recently installed the new thalamus segmentation subroutine.  It’s really wonderful, and much promise to our work. I can’t find a

[Freesurfer] Thalamic subnuclei color table

External Email - Use Caution Hello, Just a quick question. We recently installed the new thalamus segmentation subroutine. It's really wonderful, and much promise to our work. I can't find a lookup table with the numerical labels from the FS output to the thalamic nuclei.

Re: [Freesurfer] FSGD file formatting for Xhemi

External Email - Use Caution Thanks for your answer. A follow up question: How should I then specify the variable's values per hemisphere while making the FSGD file if I want to add covariates when running mri_glmfit? Thanks in advance. On Fri, Oct 25, 2019 at 12:18 AM Greve,